WERAM Information

Tag Content
WERAM ID WERAM-Sob-0045
Ensembl Protein ID Sb03g005320.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb03g005320 Sb03g005320.1 Sb03g005320.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 7.90e-12 46 187 237
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    t+C +Cg  +  +++++ Cd C++w+H+kCvk++  ++ + k++ CpsC  
  Sb03g005320.1 187 TLCGTCGGIYSADEFWIGCDMCERWYHGKCVKITPAKADSIKHYKCPSCSS 237
                    78****999999999*******************555554479******85 PP
Protein Sequence
(Fasta)		MGDAASGRGH VVYPPRSAED IFKDYRARRS AILRALTHEV EVFYAQCDPD KENLCLYGYA 60
NEAWEVALPA EEVPTELPEP ALGINFARDG MNRRDWLALV AVHSDSWLLS VAFYYAARLN 120
RNDRKRLFGM INELQTVFEV VSGARQQQSK ERSSMDNGGR SKPVKIENNG KATDEAYGED 180
DSDHGETLCG TCGGIYSADE FWIGCDMCER WYHGKCVKIT PAKADSIKHY KCPSCSSKRA 240
RQ 242
Nucleotide Sequence
(Fasta)		ATGGGGGACG CCGCCTCCGG CCGCGGCCAC GTCGTCTACC CTCCCCGCTC CGCCGAGGAC 60
ATCTTCAAGG ACTACCGCGC CCGCCGCTCC GCCATCCTCC GCGCCCTCAC TCACGAGGTC 120
GAGGTCTTCT ACGCGCAGTG CGATCCAGAC AAGGAGAACC TGTGCCTGTA CGGCTACGCG 180
AACGAGGCGT GGGAGGTGGC GCTGCCGGCG GAGGAGGTGC CCACGGAGCT GCCGGAGCCT 240
GCGCTCGGGA TCAACTTCGC GCGCGACGGG ATGAACCGCC GCGACTGGCT TGCGCTCGTC 300
GCCGTCCACT CCGACTCCTG GCTCCTCTCC GTCGCCTTTT ACTATGCCGC TCGCCTCAAT 360
CGTAATGACC GGAAGCGCTT ATTTGGCATG ATTAATGAAT TGCAAACTGT TTTTGAAGTT 420
GTCTCCGGTG CAAGACAACA GCAATCTAAA GAGAGGTCCA GTATGGACAA TGGTGGTAGA 480
TCCAAGCCTG TAAAGATAGA AAATAATGGA AAAGCCACAG ACGAAGCATA TGGAGAAGAT 540
GACAGTGATC ACGGTGAAAC CCTATGCGGA ACCTGTGGTG GGATATACAG TGCGGATGAG 600
TTCTGGATTG GGTGCGACAT GTGCGAGAGG TGGTACCATG GCAAGTGTGT CAAGATAACT 660
CCCGCCAAGG CGGATAGCAT AAAGCATTAC AAATGCCCGA GCTGCAGCTC CAAGAGGGCG 720
AGGCAGTAGC AAAACTCATG AACGCAGGAA GCCTCTGAAT GCCGGATGTA TGGTGCAGTG 780
GCGCATTGCA AAGTTTCCAG GCAGGAGAAG GCCAAGAGGC TCCATTTACA AGATTAGAAC 840
TATATTGCTA TCTTCCCTGT GCCTTATTCT TACTTTACCT ATGATAAGCT AATGTGAGGT 900
AAGATAAGAC ATTTGATAAC CAGAGGCACT TGAGTTGAGT ACCCCTATGA TAAGCTAATG 960
TGGGGTAAAA GAAGAGGAAA TCGTGCTTTA TTGAATATGG AGTTGTTTTT TCTTACAGTA 1020
ACATGTACCC CTTTTGATAA TGCATGGCTT TACAGAACAT CTCGAACTAT ATAGGAACAG 1080
AAGGTTAAGT TTTGTCAAAA CTGTTTTGTC TATCGGTCGG TCAGTGGCAT ATTGATTGCT 1140
ACGCAAAATA CATATGTACC AAAGGAGAAG CACAAGTAGA ATAAATGGAC CATACATGAA 1200
AAGGAAAATG TTTATATTTA CATTGAGCGA TAACTGTAGC ACATAGTAGT ATGAAAACTA 1260
GCTTTACGAT TTGTTTTTTT GTTGTAACTC TTTACATCCT TTTTTTAATA GAACTTCCTA 1320
ATTCTT 1327
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0157 GRMZM5G893976_P01 Zea mays 97 4e-139 490
WERAM-Org-0051 ORGLA05G0040800.1 Oryza glaberrima 81 3e-109 391
WERAM-Orm-0050 OMERI05G04360.1 Oryza meridionalis 81 6e-109 390
WERAM-Ori-0059 BGIOSGA018756-PA Oryza indica 81 1e-108 389
WERAM-Lep-0051 LPERR05G03920.1 Leersia perrieri 81 2e-107 385
WERAM-Orb-0051 OBART05G04390.1 Oryza barthii 74 6e-107 384
WERAM-Orgl-0050 OGLUM05G04310.1 Oryza glumaepatula 74 6e-107 383
WERAM-Orbr-0060 OB05G14070.1 Oryza brachyantha 78 7e-105 377
WERAM-Sei-0039 Si010912m Setaria italica 80 3e-104 374
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 78 7e-104 373
WERAM-Brd-0048 BRADI2G34640.1 Brachypodium distachyon 77 9e-104 373
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 78 1e-103 373
WERAM-Aet-0099 EMT23706 Aegilops tauschii 70 2e-98 355
WERAM-Mua-0107 GSMUA_Achr7P15530_001 Musa acuminata 72 5e-94 340
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 69 4e-86 314
WERAM-Sol-0105 Solyc09g005360.2.1 Solanum lycopersicum 69 2e-84 309
WERAM-Prp-0085 EMJ19499 Prunus persica 65 4e-84 308
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 68 5e-84 307
WERAM-Pot-0155 POPTR_0016s12420.1 Populus trichocarpa 69 8e-84 306
WERAM-Viv-0083 VIT_13s0067g01000.t01 Vitis vinifera 68 6e-83 303
WERAM-Php-0009 PP1S117_107V6.1 Physcomitrella patens 58 1e-82 303
WERAM-Thc-0059 EOY07191 Theobroma cacao 68 4e-81 298
WERAM-Met-0092 KEH28874 Medicago truncatula 68 1e-80 296
WERAM-Orp-0040 OPUNC03G36010.1 Oryza punctata 62 1e-78 290
WERAM-Amt-0010 ERN05231 Amborella trichopoda 65 1e-78 289
WERAM-Orr-0041 ORUFI03G40590.1 Oryza rufipogon 64 2e-78 289
WERAM-Orni-0038 ONIVA03G40570.1 Oryza nivara 64 2e-78 289
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 64 2e-78 289
WERAM-Ors-0037 OS03T0818300-01 Oryza sativa 64 2e-78 288
WERAM-Brr-0171 Bra034860.1-P Brassica rapa 63 3e-78 288
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 63 5e-77 284
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 62 2e-75 279
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 64 6e-75 277
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 64 1e-74 276
Created Date 25-Jun-2016