WERAM Information

Tag Content
WERAM ID WERAM-Zem-0158
Ensembl Protein ID GRMZM5G898314_P01
Gene Name Zm.13749 ZEAMMB73_736560
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM5G898314 GRMZM5G898314_T01 GRMZM5G898314_P01
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 3.00e-24 108
Organism Zea mays
Domain Profile
  HDAC HD2
Query: 1  MEFWGEEVKPGATVSCKVGDGLVIHLSQAALGEPK-KASENAIVSVKIDDKKLVLGTLSV 59
          MEFWG EVK G  V+    +G++IH+SQA+LGE K K  E   + VK+ ++ LVLGTLS 
Sbjct: 1  MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 60 EKHPQISCDLVFDKDFELSHNSKTASVFFCGYKSP 94
          E  PQ+ CDLVFDK+FELSH     SV+F GYK+P
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTP 95
Query: 188 PTPKKTEVVVGKKRAIEAETP----SGKKAKSEQSAQKTGDKVSTSHPAKQSSKTPADKS 243
           PTPKK      KKRA E  TP    S KKAK   + QKT                  D+ 
Sbjct: 163 PTPKKP--ASSKKRANET-TPKAPVSAKKAKVAVTPQKT------------------DEK 201
Query: 244 TKTPTADKKSPKSGSH-ACKSC----SNASALESHQKAK 277
            K   A  +SPKS S  +C SC    ++ +ALESH KAK
Sbjct: 202 KKGGKAANQSPKSASQVSCGSCKKTFNSGNALESHNKAK 240
Protein Sequence
(Fasta)		MEFWGEEVKP GATVSCKVGD GLVIHLSQAA LGEPKKASEN AIVSVKIDDK KLVLGTLSVE 60
KHPQISCDLV FDKDFELSHN SKTASVFFCG YKSPVPLFES DSGEDSSDEE VEPDLIPMQN 120
NEIKISTAKV PVKVGIQNAD EDETSSGDDD DFTDSDSEMS EEDESSDEDE VSSDTDTSDD 180
SGSEEQTPTP KKTEVVVGKK RAIEAETPSG KKAKSEQSAQ KTGDKVSTSH PAKQSSKTPA 240
DKSTKTPTAD KKSPKSGSHA CKSCSNASAL ESHQKAKKHE A 281
Nucleotide Sequence
(Fasta)		GCTAAACCCT AAACCCAGCA CCAGCGCCCC CAATCCTCCA ACTTCCACTC GAGTAGGGTT 60
CTGCCGGCCG TTTCCTCGTC GTCGCAATGG AGTTCTGGGG TGAAGAAGTG AAGCCAGGAG 120
CCACGGTTTC TTGCAAAGTT GGTGATGGTT TGGTTATCCA CCTTTCACAG GCTGCCCTAG 180
GGGAACCAAA GAAAGCGAGT GAGAATGCCA TTGTGTCTGT CAAAATTGAT GATAAGAAAC 240
TAGTGCTTGG AACCTTATCA GTTGAGAAGC ATCCTCAAAT CTCTTGTGAT CTGGTATTTG 300
ATAAAGATTT TGAGTTATCA CACAATTCAA AGACAGCTAG TGTTTTCTTC TGTGGCTACA 360
AGTCACCTGT TCCTCTGTTT GAGTCTGATT CTGGTGAAGA TAGTTCAGAT GAAGAGGTTG 420
AACCCGATCT AATTCCAATG CAGAATAATG AAATTAAAAT TTCTACTGCA AAGGTTCCCG 480
TGAAGGTTGG TATACAAAAT GCTGATGAAG ATGAAACTTC TAGTGGTGAT GATGATGATT 540
TCACTGATAG TGATAGTGAA ATGTCTGAGG AAGATGAGTC CAGTGATGAA GATGAAGTGT 600
CAAGCGATAC AGATACTAGT GATGATTCTG GTTCGGAAGA ACAGACACCT ACCCCAAAGA 660
AGACTGAGGT AGTAGTTGGC AAGAAGAGGG CAATTGAAGC TGAGACACCT TCTGGTAAGA 720
AGGCTAAGTC TGAACAATCT GCTCAGAAAA CAGGCGACAA GGTCTCAACT TCTCATCCTG 780
CAAAGCAGTC CAGCAAGACT CCTGCAGACA AATCTACAAA GACCCCCACA GCTGACAAGA 840
AGTCCCCCAA ATCTGGGAGC CATGCCTGCA AGTCATGCAG CAATGCGTCA GCACTTGAGT 900
CTCATCAGAA GGCAAAGAAG CATGAAGCCT AGAGCACGTG CTATACCATC TACTCGTTAT 960
CAAAATCAGT GGTCTTATTT TTGAACTTGA AAATGTCCAA GTTTGGAACT TGCCCAGTAG 1020
TCATCTGATT AGTGGTGTTA TTTTTCTTTG AACTTGGGAA TTGTCTAGTT TGGGACATAC 1080
GCGGTATGCC TGGTTAAGAA CATGGGAAAT GTCAGGTTAG AACAGGTCCT GCTGGCCCAG 1140
TTTTGGTCGT CGTCGAATGT TGCTAATGTT GGAACTGATT ATTGTGACCC GTAAGGCCGT 1200
AAGGGAGAAT CTTTGTTATC TGGTAGTGCC TAGTGCAAAT CACCTTTTTC TCAGTTGTTA 1260
AACATCTTGC TTTTACGGTG TTCGTTTTTT CCCGAGAAA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0059 Sb03g043350.1 Sorghum bicolor 81 5e-90 328
WERAM-Sei-0085 Si022778m Setaria italica 68 4e-34 142
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 69 9e-34 140
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 69 9e-34 140
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 68 5e-33 138
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 66 2e-31 133
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 68 2e-30 129
WERAM-Sol-0107 Solyc09g009030.2.1 Solanum lycopersicum 64 1e-29 127
WERAM-Sot-0008 PGSC0003DMT400006927 Solanum tuberosum 62 5e-29 125
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 68 7e-29 124
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 68 7e-29 124
WERAM-Prp-0078 EMJ06874 Prunus persica 62 1e-28 124
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 66 4e-28 122
WERAM-Mua-0006 GSMUA_Achr10P04780_001 Musa acuminata 60 6e-28 121
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 66 1e-27 120
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 66 1e-27 120
WERAM-Pot-0109 POPTR_0009s15160.1 Populus trichocarpa 63 3e-27 119
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 59 3e-26 116
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 62 3e-26 115
WERAM-Thc-0115 EOY33573 Theobroma cacao 57 4e-26 115
WERAM-Aet-0097 EMT09079 Aegilops tauschii 62 5e-26 115
WERAM-Arl-0089 fgenesh2_kg.5__ 872__ AT3G44750.1 Arabidopsis lyrata 56 2e-24 109
WERAM-Art-0083 AT3G44750.1 Arabidopsis thaliana 56 4e-24 108
WERAM-Met-0051 KEH38943 Medicago truncatula 56 7e-24 108
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 58 9e-24 107
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 53 2e-23 106
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 57 5e-23 105
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 47 1e-22 103
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 57 1e-21 101
WERAM-Bro-0028 Bo2g024240.1 Brassica oleracea 56 1e-21 100
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 62 1e-19 94.0
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 42 5e-17 85.5
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 36 1e-11 67.8
WERAM-Amt-0052 ERN12770 Amborella trichopoda 62 1e-11 67.8
WERAM-Orm-0014 OMERI01G38240.2 Oryza meridionalis 50 5e-10 62.4
Created Date 25-Jun-2016