WERAM Information

Tag Content
WERAM ID WERAM-Brr-0032
Ensembl Protein ID Bra006562.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra006562 Bra006562.1 Bra006562.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.10e-12 47.5 15 65
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt  2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52
                   t+C +C ++++ ++++++Cd C++wfH+ Cvk++  +++  k++ CpsC +
  Bra006562.1-P 15 TLCGACVDNYASDEFWICCDMCEKWFHGICVKITPARAEHIKHYKCPSCSN 65
                   78****999999999*******************666664479******86 PP
Protein Sequence
(Fasta)		MFEEEGLDGD EHGDTLCGAC VDNYASDEFW ICCDMCEKWF HGICVKITPA RAEHIKHYKC 60
PSCSNKRARP
Nucleotide Sequence
(Fasta)		ATGTTCGAGG AAGAAGGATT AGATGGAGAT GAACACGGTG ATACCCTGTG TGGAGCTTGT 60
GTAGATAACT ATGCTTCTGA TGAATTCTGG ATCTGCTGTG ACATGTGCGA GAAATGGTTC 120
CATGGGATAT GTGTGAAGAT TACTCCAGCT AGAGCTGAGC ATATCAAGCA TTACAAGTGC 180
CCTTCTTGCA GCAACAAAAG AGCTCGACCC TAA 214
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0104 EOY29997 Theobroma cacao 91 2e-29 124
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 96 2e-28 120
WERAM-Bro-0179 Bo9g151850.1 Brassica oleracea 95 3e-28 120
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 95 4e-28 119
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 91 6e-27 115
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 91 1e-26 114
WERAM-Glm-0158 GLYMA13G16740.1 Glycine max 91 1e-26 114
WERAM-Prp-0082 EMJ27202 Prunus persica 89 2e-26 114
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 89 5e-26 112
WERAM-Orl-0078 KN539672.1_FGP003 Oryza longistaminata 76 7e-26 112
WERAM-Met-0013 KEH39913 Medicago truncatula 88 8e-26 112
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 85 9e-26 112
WERAM-Amt-0088 ERM99796 Amborella trichopoda 89 2e-25 110
WERAM-Sol-0093 Solyc07g041190.2.1 Solanum lycopersicum 86 7e-25 108
WERAM-Aet-0091 EMT03181 Aegilops tauschii 86 5e-23 102
WERAM-Brd-0009 BRADI1G21740.1 Brachypodium distachyon 76 2e-22 101
WERAM-Sei-0086 Si023009m Setaria italica 80 2e-22 100
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 80 2e-22 100
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 81 2e-22 100
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 81 2e-22 100
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 80 2e-22 100
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 81 2e-22 100
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 81 2e-22 100
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 81 2e-22 100
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 81 2e-22 100
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 81 2e-22 100
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 81 2e-22 100
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 81 2e-22 100
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 81 2e-22 100
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 80 2e-22 100
WERAM-Php-0137 PP1S97_167V6.1 Physcomitrella patens 80 3e-22 100
WERAM-Tra-0027 Traes_1DL_4F47319EC.1 Triticum aestivum 80 3e-22 100
WERAM-Orp-0050 OPUNC05G14790.1 Oryza punctata 78 4e-22 99.8
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 82 1e-21 98.2
Created Date 25-Jun-2016