WERAM Information

Tag Content
WERAM ID WERAM-Arl-0031
Ensembl Protein ID fgenesh1_pm.C_scaffold_1001524
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh1_pm.C_scaffold_1001524 fgenesh1_pm.C_scaffold_1001524 fgenesh1_pm.C_scaffold_1001524
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 2.80e-24 85.7 131 215
Organism Arabidopsis lyrata
Domain Profile
  Ac_Reader Bromodomain
                       BROMO.txt  56 lifnNaka 63 
                                     +if+N++ 
  fgenesh1_pm.C_scaffold_1001524 131 QIFKNCNS 138
                                     8*****85 PP
                       BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                                     +h+++++F+ pvd++ l ++dY++i+kePmdL t+k +l ++ Y+sp++f++Dvrl fnNa  yn+ +++v
  fgenesh1_pm.C_scaffold_1001524 145 KHKCAWVFHVPVDAEgLGLHDYHNIVKEPMDLGTVKTKLGKNLYKSPLDFAEDVRLTFNNAILYNPVGHDV 215
                                     89***************************************************************999887 PP
Protein Sequence
(Fasta)		MSSDHISGGG ASKTKKQKWS SSQNRTKPMV VSRNERSVPL VSPSNSEDDH HMLKISLSSI 60
SKLELRNLKR KLKSELDEVR SLIKRFDPEV NLGGNIGSMA KTGVVGRNKK LKTGNGGGKK 120
SGHGAEKGTV QIFKNCNSLL TKLMKHKCAW VFHVPVDAEG LGLHDYHNIV KEPMDLGTVK 180
TKLGKNLYKS PLDFAEDVRL TFNNAILYNP VGHDVHRFAE LLLNMFEDKW VSIEMQYDNL 240
HRKFKPTRDI EFPAPASTIA PIVEPLPAVP TPPSPSPPPP PQPPVLENTT WEREESMTIP 300
VEPEAVTTAP DKAEEEEAPV NNRDLTLEEK RRLSEELQDL PYDKLETVVQ IIKKSNPELS 360
QQDDEIELDI DSLDINTLWE LYRFVTGYKE SLSKKNEAQG FGSERDAESV HNSIQEPTTL 420
VTGTNTSRVT ESGKAIRTSS PGGQENNASG SSSSNSSSSD SGSCSSDSDS DSSSGRGSDN 480
GN 482
Nucleotide Sequence
(Fasta)		ATGTCTTCTG ACCATATATC AGGTGGTGGA GCTTCGAAGA CGAAGAAGCA AAAGTGGAGC 60
TCAAGCCAGA ACCGAACCAA ACCAATGGTG GTTTCTAGAA ACGAGCGATC GGTTCCTCTT 120
GTATCTCCTT CGAACTCGGA GGACGATCAT CACATGTTAA AGATAAGTCT GAGCTCGATT 180
TCGAAGCTTG AGCTTAGGAA CTTGAAGCGG AAACTAAAAT CTGAGCTAGA TGAGGTTAGG 240
AGCTTGATCA AACGGTTCGA TCCCGAAGTT AATCTTGGTG GAAATATTGG GTCAATGGCT 300
AAAACTGGTG TTGTAGGGAG AAACAAGAAG CTGAAAACAG GGAATGGAGG AGGTAAGAAA 360
AGTGGGCATG GAGCTGAAAA AGGTACGGTT CAGATTTTCA AGAACTGTAA CAGTTTGCTT 420
ACGAAATTGA TGAAGCATAA GTGTGCATGG GTATTCCATG TCCCAGTGGA TGCTGAAGGA 480
CTTGGCTTGC ATGATTATCA CAATATTGTT AAAGAGCCTA TGGATTTGGG TACAGTGAAG 540
ACTAAGTTGG GGAAAAATTT GTATAAGTCG CCATTGGATT TCGCTGAAGA TGTTAGACTT 600
ACTTTTAACA ATGCGATTTT GTATAATCCG GTTGGGCATG ATGTGCATCG TTTTGCTGAG 660
CTTTTGTTGA ACATGTTTGA AGATAAATGG GTATCCATTG AAATGCAGTA TGATAATCTT 720
CATAGGAAGT TCAAACCAAC TCGTGATATT GAGTTCCCTG CTCCTGCTTC AACCATTGCT 780
CCTATTGTAG AGCCATTACC AGCAGTTCCT ACACCACCTT CCCCGTCTCC TCCTCCACCA 840
CCACAACCTC CGGTACTTGA AAATACGACT TGGGAGAGAG AAGAATCTAT GACAATCCCA 900
GTGGAACCTG AAGCTGTAAC TACTGCTCCC GACAAAGCTG AAGAAGAGGA AGCACCTGTT 960
AACAACAGGG ACCTCACTTT GGAAGAGAAA CGGAGACTCA GTGAAGAGCT TCAGGACTTG 1020
CCTTATGACA AACTAGAGAC TGTTGTTCAG ATCATAAAGA AGAGCAATCC AGAGCTCTCT 1080
CAACAAGATG ATGAGATTGA GCTGGATATT GATAGTCTTG ATATCAACAC GCTTTGGGAG 1140
CTTTATAGAT TTGTGACTGG GTATAAGGAG AGCTTGAGCA AGAAAAACGA GGCCCAGGGA 1200
TTTGGTTCAG AAAGAGATGC TGAATCTGTT CACAATAGTA TTCAAGAACC AACCACTCTA 1260
GTAACTGGCA CCAATACATC GAGAGTTACT GAATCAGGAA AAGCAATTCG CACATCATCT 1320
CCTGGTGGGC AAGAAAACAA TGCAAGTGGA TCAAGTAGTT CTAACAGTTC TAGTAGTGAC 1380
TCAGGATCTT GCTCTAGTGA TTCTGACAGT GACAGCTCCT CAGGACGTGG ATCAGATAAT 1440
GGTAATTAG
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0014 AT1G17790.1 Arabidopsis thaliana 88 1e-167 586
WERAM-Bro-0148 Bo8g067470.1 Brassica oleracea 65 4e-126 449
WERAM-Brr-0083 Bra016586.1-P Brassica rapa 66 2e-123 439
WERAM-Thc-0085 EOY13187 Theobroma cacao 50 8e-64 241
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 47 9e-60 228
WERAM-Sot-0105 PGSC0003DMT400032373 Solanum tuberosum 46 1e-58 224
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 48 2e-58 224
WERAM-Prp-0055 EMJ15030 Prunus persica 46 3e-58 223
WERAM-Sol-0098 Solyc07g062660.2.1 Solanum lycopersicum 44 7e-58 222
WERAM-Amt-0025 ERN13953 Amborella trichopoda 47 1e-57 221
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 45 1e-56 218
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 44 2e-56 217
WERAM-Met-0055 KEH39253 Medicago truncatula 47 2e-54 210
WERAM-Zem-0130 GRMZM2G400907_P01 Zea mays 43 9e-54 208
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 45 7e-53 205
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 49 2e-52 204
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 46 4e-52 203
WERAM-Sei-0009 Si001167m Setaria italica 48 6e-52 202
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 44 1e-51 201
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 48 1e-51 201
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 48 2e-51 200
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 48 3e-51 200
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 48 5e-51 199
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 48 6e-51 199
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 48 7e-51 199
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 48 2e-50 197
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 48 2e-50 197
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 48 3e-50 197
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 45 5e-49 192
WERAM-Aet-0058 EMT09500 Aegilops tauschii 46 3e-47 187
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 48 3e-45 180
WERAM-Orb-0001 OBART01G07260.1 Oryza barthii 48 8e-45 178
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 43 3e-43 173
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 36 2e-35 147
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 58 2e-33 140
WERAM-Drm-0012 FBpp0071074 Drosophila melanogaster 51 2e-24 111
Created Date 25-Jun-2016