WERAM Information

Tag Content
WERAM ID WERAM-Viv-0060
Ensembl Protein ID VIT_08s0105g00360.t01
Gene Name VIT_08s0105g00360
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_08s0105g00360 VIT_08s0105g00360.t01 VIT_08s0105g00360.t01
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 6.30e-13 49.3 188 237
Organism Vitis vinifera
Domain Profile
  Me_Reader PHD
                PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                            t+C  Cg +++ +++++ Cd C++wfH+kCvk++  ++++ k++ CpsC 
  VIT_08s0105g00360.t01 188 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAESIKQYKCPSCS 237
                            78****888888889*******************555554489******6 PP
Protein Sequence
(Fasta)		MEMASISSSP RTVEEIFKDY SGRRAGVVRA LTYDVDEFYK LCDPEKENLC LYGHPNDTWE 60
VTLPAEEVPP ELPEPALGIN FARDGMNRKD WLSLVAVHSD SWLLSAAFYL GARLNRNERK 120
RLFSMINDLP TVFEVVTERK PIKDKPSVDS GSKSRVSTKR GNEGQVKSTP KLAADESFEE 180
EEDEHSETLC GSCGGNYNAD EFWIGCDICE RWFHGKCVKI TPAKAESIKQ YKCPSCSLKR 240
SRQ 243
Nucleotide Sequence
(Fasta)		ATGCATCTCC TCTTCTCTCT TCGATCCTCT CTTCTCTATT AAATTCAGTT GGTGTTTGGA 60
GTCTCTCGAA TCAAAACGCT GCGTTTCGAT CTCGAACGCC ATGGAAATGG CTTCTATTTC 120
TTCGAGTCCG AGGACTGTAG AGGAGATCTT CAAGGATTAC AGCGGTCGTA GAGCTGGTGT 180
TGTGCGTGCC TTAACCTACG ATGTTGATGA ATTCTACAAG CTCTGCGATC CAGAGAAAGA 240
GAATTTGTGT CTGTATGGTC ATCCAAATGA TACTTGGGAA GTAACTCTTC CAGCAGAGGA 300
AGTTCCTCCA GAGCTCCCTG AGCCAGCGCT TGGGATCAAT TTTGCGAGAG ATGGCATGAA 360
CCGCAAAGAC TGGCTTTCAC TGGTTGCTGT GCACAGTGAT TCTTGGTTGC TCTCTGCAGC 420
TTTCTATCTT GGTGCTCGCC TTAACCGCAA TGAAAGGAAA CGTCTATTTA GTATGATCAA 480
TGATCTGCCC ACTGTCTTTG AAGTTGTAAC AGAGAGGAAG CCTATAAAAG ACAAGCCTAG 540
TGTGGATAGT GGAAGCAAAT CTCGAGTCAG CACAAAGAGG GGGAATGAAG GGCAAGTGAA 600
AAGCACCCCG AAGCTGGCAG CAGATGAGAG CTTTGAGGAG GAGGAAGATG AACATAGTGA 660
AACCCTCTGT GGGAGCTGTG GTGGGAACTA CAATGCTGAT GAGTTCTGGA TTGGGTGCGA 720
CATCTGTGAG AGGTGGTTCC ATGGAAAGTG TGTGAAGATA ACACCTGCCA AGGCTGAGAG 780
CATTAAGCAA TATAAGTGTC CATCTTGCAG CTTAAAGAGG AGCAGGCAGT AGTAGTCCAC 840
TAAAACCAGT GGAGGGGGAT TAACAGTGTT GCTTTGGTGC CTGACAAAGT AGTATAGCAA 900
TAGAACCTTT TGGGGCTTCT CATGGACTTT GTTGTTGTGA CCTTTATTTA GTACCCAGAT 960
GCTCTCAGAG GGTGGAAGGT TCTCCTTGCC ACCTTGAATG TTTGCTTCTA TTTTTCATTT 1020
TAGTCATTTT CTATTTA 1038
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0059 EOY07191 Theobroma cacao 88 1e-105 379
WERAM-Prp-0083 EMJ07006 Prunus persica 89 9e-105 376
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 86 7e-104 373
WERAM-Glm-0018 GLYMA03G07750.1 Glycine max 86 7e-104 373
WERAM-Met-0092 KEH28874 Medicago truncatula 86 3e-103 371
WERAM-Amt-0010 ERN05231 Amborella trichopoda 84 6e-102 367
WERAM-Sol-0125 Solyc10g076690.1.1 Solanum lycopersicum 82 7e-102 367
WERAM-Pot-0074 POPTR_0006s10180.1 Populus trichocarpa 86 4e-101 364
WERAM-Mua-0013 GSMUA_Achr10P23040_001 Musa acuminata 81 5e-100 360
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 80 2e-93 338
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 80 2e-93 338
WERAM-Bro-0102 Bo5g136750.1 Brassica oleracea 76 6e-91 330
WERAM-Brr-0171 Bra034860.1-P Brassica rapa 77 3e-90 328
WERAM-Sob-0020 Sb02g006980.1 Sorghum bicolor 71 2e-87 319
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 74 2e-86 315
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 74 2e-86 315
WERAM-Ori-0080 BGIOSGA024567-PA Oryza indica 74 2e-86 315
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 71 2e-86 315
WERAM-Orm-0069 OMERI07G06560.1 Oryza meridionalis 73 5e-86 314
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 73 5e-86 314
WERAM-Org-0074 ORGLA07G0067800.1 Oryza glaberrima 73 5e-86 314
WERAM-Lep-0044 LPERR03G33070.1 Leersia perrieri 73 6e-86 313
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 69 1e-85 313
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 74 1e-85 313
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 73 5e-85 311
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 70 1e-84 309
WERAM-Sei-0134 Si037171m Setaria italica 67 1e-84 309
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 69 2e-84 309
WERAM-Orbr-0050 OB03G45850.1 Oryza brachyantha 70 5e-84 307
WERAM-Brd-0027 BRADI1G53660.1 Brachypodium distachyon 69 9e-82 300
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 70 1e-80 296
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 65 8e-75 277
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 65 8e-75 276
WERAM-Aet-0106 EMT19247 Aegilops tauschii 63 5e-70 261
Created Date 25-Jun-2016