WERAM Information

Tag Content
WERAM ID WERAM-Viv-0015
Ensembl Protein ID VIT_04s0008g00910.t01
Gene Name VIT_04s0008g00910
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_04s0008g00910 VIT_04s0008g00910.t01 VIT_04s0008g00910.t01
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 9.20e-27 95 45 332
Organism Vitis vinifera
Domain Profile
  HDAC Class-I
            class-1.txt   4 ayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvged 91 
                             y  + d++ + +++ hp   +++  +  +++  g  +k +iv+p +as+++ll +hse y++ lk++    +  ++ e+   ++  +
  VIT_04s0008g00910.t01  45 IYSSSYDIAFLGMEKLHPFDSSKWGRICRFLILDGALEKNHIVEPLEASKDDLLVVHSESYLNSLKTSL---NVAVIIEVPPVALLPN 129
                            57777788888899999*99999966555554445556669********************99998654...445666889999**** PP
            class-1.txt  92 cPvfdg.lfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlaile.llk.khkrvlyididlhhGDgve 176
                            c v ++ l+ +     G+++ aa kL  ke+  ain  GG+hh    +  Gfc   Di l i   + + + +rv+ id+d h G+g e
  VIT_04s0008g00910.t01 130 CLVQQKvLYPFR-KQVGGTILAA-KLA-KERGWAINVGGGFHHCSAGKGGGFCAYADISLCIHYaFIRlNISRVMIIDLDAHQGNGHE 214
                            ***987256665.5567777554.565.56789*****************************752444499***************** PP
            class-1.txt 177 eafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrl 264
                              f++  rv  +    y+++ +P+         e  +y    v +  g   ++y + + + ++   ++f+Pe vv + G+D l gD+l
  VIT_04s0008g00910.t01 215 LDFSNDRRVYILD--MYNPGIYPS-------DFEARRYIDQKVEVVSGTTTNEYLTKLDEALKVAGRMFDPELVVYNAGTDILDGDPL 293
                            *********9865..588877775.......4556677778899999*******9999****************************** PP
            class-1.txt 265 gefnlsikghae....cvkfvksfnlpllvlGGGGYtlr 299
                            g  ++s +g ++    + +f ++ ++pl++l  GGY + 
  VIT_04s0008g00910.t01 294 GRLKISPEGVTSrdekVFRFAREKKIPLIMLTSGGYMKS 332
                            ********9863334499999***************865 PP
Protein Sequence
(Fasta)		MSTAPVNPAS VSSSTSASDA ETLRRGRILS SKLYFDVPLT KVPIIYSSSY DIAFLGMEKL 60
HPFDSSKWGR ICRFLILDGA LEKNHIVEPL EASKDDLLVV HSESYLNSLK TSLNVAVIIE 120
VPPVALLPNC LVQQKVLYPF RKQVGGTILA AKLAKERGWA INVGGGFHHC SAGKGGGFCA 180
YADISLCIHY AFIRLNISRV MIIDLDAHQG NGHELDFSND RRVYILDMYN PGIYPSDFEA 240
RRYIDQKVEV VSGTTTNEYL TKLDEALKVA GRMFDPELVV YNAGTDILDG DPLGRLKISP 300
EGVTSRDEKV FRFAREKKIP LIMLTSGGYM KSSAKVIADS IVNLSRKCLI DTGSSHSRG 359
Nucleotide Sequence
(Fasta)		AAACCGAAAA AGAATCTTGA TGACGTGGCT CGAAGCAGGG GAACTGCCTG GCAGACTGCC 60
ACAGAATCTC TGAAATTCCA AAACCCTAAT ATTCTGGGCG CGTCGCGAGA AAGCCAAAAG 120
GAATAAAAAG AAAACAAATT TTCTGTAAGG ATTGTTCGTC TTCTTTGTTC ATATATTCCG 180
CAATTAAAAC ATCCCAATCT CTTTGTCGCC ACATATTCTC CAATCCTTCA ATTCTGTGTA 240
AGGATGTCCA CCGCGCCTGT AAATCCCGCT TCCGTTTCTT CCTCAACTTC TGCAAGCGAC 300
GCGGAGACTC TCCGGCGAGG CCGTATCCTC TCAAGCAAGC TCTACTTCGA TGTGCCTCTC 360
ACTAAGGTTC CAATTATTTA CTCGTCGTCG TACGACATTG CGTTTCTTGG CATGGAAAAA 420
CTGCACCCAT TTGATTCTTC TAAGTGGGGT CGCATATGCC GGTTCCTTAT CTTGGATGGT 480
GCTTTGGAGA AAAACCATAT TGTTGAGCCT CTGGAAGCTT CAAAGGATGA TCTCCTAGTG 540
GTACATTCAG AATCATACTT GAATAGTCTG AAAACCAGTC TCAATGTTGC TGTTATAATT 600
GAGGTCCCCC CTGTTGCATT ACTGCCCAAT TGTCTTGTGC AGCAGAAAGT TCTTTATCCA 660
TTTCGCAAGC AGGTTGGGGG AACCATTTTG GCTGCAAAGC TTGCAAAAGA GCGAGGATGG 720
GCCATCAATG TCGGTGGAGG GTTCCATCAC TGTTCTGCAG GAAAAGGTGG TGGATTCTGT 780
GCTTATGCAG ATATTTCTCT TTGCATACAC TATGCCTTTA TCCGGTTGAA TATTTCTAGG 840
GTGATGATAA TTGATCTTGA TGCACATCAA GGAAATGGCC ATGAATTGGA TTTTTCCAAT 900
GACAGACGAG TTTATATTCT GGATATGTAC AACCCTGGGA TATATCCATC TGATTTTGAG 960
GCAAGGAGAT ATATTGATCA GAAGGTTGAA GTAGTGAGTG GGACCACAAC TAATGAGTAC 1020
CTGACAAAAT TAGATGAAGC ACTCAAGGTT GCTGGACGCA TGTTTGATCC TGAGTTGGTG 1080
GTGTATAATG CTGGCACTGA TATCCTAGAT GGAGATCCAC TGGGAAGGTT GAAGATCAGT 1140
CCTGAAGGGG TAACTAGTAG AGATGAGAAG GTTTTCAGAT TTGCTCGTGA GAAGAAAATT 1200
CCTCTCATCA TGCTCACATC AGGTGGTTAT ATGAAATCCA GTGCCAAAGT AATAGCAGAT 1260
TCAATAGTAA ACCTGTCGAG GAAATGCTTG ATAGACACTG GGAGTTCTCA TTCCCGGGGT 1320
TAAAAGTAAT ACTATTATAT GTAGTAGTTA TTCTACAAAG TTCCATGTTA CTTCTTTACA 1380
ATAGCTTTCA TGAAAATGTT TACTTACCAA TTATTGCAAG GTTGGGGCAC AGTTTCTTGG 1440
TTTTCTGTAC ATATGTTCAA AACGAGCGTG TATTAGTCGA TCATCATCAT ATGTAATACT 1500
GTAACTATTT GTATGACAAA CCCTATAAGA AATATTGAGG AGAATGTATA TTCAGAGCAG 1560
TTGTGTTTGG CATGTAATTA TGAGGTAATG GTTCATGGGT CTGT 1605
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pot-0080 POPTR_0006s24640.1 Populus trichocarpa 86 1e-173 606
WERAM-Sol-0102 Solyc08g065350.2.1 Solanum lycopersicum 82 4e-168 588
WERAM-Glm-0229 GLYMA17G34770.1 Glycine max 82 6e-167 583
WERAM-Met-0014 AES59273 Medicago truncatula 83 1e-164 576
WERAM-Arl-0095 fgenesh2_kg.6__ 2585__ AT5G26040.2 Arabidopsis lyrata 80 6e-161 564
WERAM-Art-0129 AT5G26040.2 Arabidopsis thaliana 81 1e-160 563
WERAM-Thc-0103 EOY29884 Theobroma cacao 79 7e-159 557
WERAM-Mua-0015 GSMUA_Achr10P28050_001 Musa acuminata 80 5e-158 554
WERAM-Ors-0058 OS06T0571100-01 Oryza sativa 78 4e-157 551
WERAM-Orni-0064 ONIVA06G22840.1 Oryza nivara 78 4e-157 551
WERAM-Ori-0066 BGIOSGA021002-PA Oryza indica 78 4e-157 551
WERAM-Org-0062 ORGLA06G0157900.1 Oryza glaberrima 78 4e-157 551
WERAM-Orb-0065 OBART06G18360.1 Oryza barthii 78 4e-157 551
WERAM-Orgl-0063 OGLUM06G20210.1 Oryza glumaepatula 78 8e-157 550
WERAM-Orr-0066 ORUFI06G20130.1 Oryza rufipogon 78 8e-157 550
WERAM-Brd-0021 BRADI1G37510.1 Brachypodium distachyon 77 2e-154 542
WERAM-Brr-0052 Bra009877.1-P Brassica rapa 77 6e-154 540
WERAM-Tra-0321 Traes_7DL_86EEFA04E.2 Triticum aestivum 75 1e-153 539
WERAM-Bro-0132 Bo7g095520.1 Brassica oleracea 77 2e-153 539
WERAM-Sei-0028 Si006784m Setaria italica 74 9e-153 536
WERAM-Zem-0011 GRMZM2G008425_P01 Zea mays 72 8e-150 527
WERAM-Sob-0134 Sb10g022550.1 Sorghum bicolor 73 4e-149 524
WERAM-Orbr-0073 OB06G26590.1 Oryza brachyantha 73 1e-143 506
WERAM-Orm-0062 OMERI06G19350.1 Oryza meridionalis 72 1e-140 496
WERAM-Prp-0064 EMJ26901 Prunus persica 83 2e-138 489
WERAM-Aet-0055 EMT26973 Aegilops tauschii 65 1e-137 486
WERAM-Tru-0023 TRIUR3_12206-P1 Triticum urartu 76 1e-136 483
WERAM-Lep-0065 LPERR06G15640.1 Leersia perrieri 75 1e-135 479
WERAM-Php-0113 PP1S53_217V6.1 Physcomitrella patens 67 2e-131 466
WERAM-Sem-0048 EFJ15307 Selaginella moellendorffii 66 7e-130 460
WERAM-Hov-0085 MLOC_6441.1 Hordeum vulgare 76 1e-116 417
WERAM-Sot-0090 PGSC0003DMT400076986 Solanum tuberosum 84 9e-115 410
WERAM-Pof-0112 ENSPFOP00000009813.1 Poecilia formosa 58 1e-111 400
WERAM-Xim-0081 ENSXMAP00000007517.1 Xiphophorus maculatus 58 2e-110 396
WERAM-Orla-0136 ENSORLP00000016174.1 Oryzias latipes 57 4e-109 392
WERAM-Leo-0143 ENSLOCP00000017300.1 Lepisosteus oculatus 58 1e-108 390
WERAM-Pes-0146 ENSPSIP00000017189.1 Pelodiscus sinensis 59 2e-108 389
WERAM-Eqc-0015 ENSECAP00000002522.1 Equus caballus 59 2e-108 389
WERAM-Poa-0118 ENSPPYP00000014982.2 Pongo abelii 59 8e-108 387
WERAM-Gog-0090 ENSGGOP00000007570.2 Gorilla gorilla 59 9e-108 387
WERAM-Hos-0174 ENSP00000295757.3 Homo sapiens 59 1e-107 387
WERAM-Myl-0189 ENSMLUP00000015766.2 Myotis lucifugus 58 1e-107 387
WERAM-Meg-0057 ENSMGAP00000005254.2 Meleagris gallopavo 58 1e-107 386
WERAM-Orp-0063 OPUNC06G17220.1 Oryza punctata 80 2e-107 386
WERAM-Anp-0099 ENSAPLP00000011801.1 Anas platyrhynchos 58 2e-107 386
WERAM-Loa-0005 ENSLAFP00000000421.3 Loxodonta africana 58 2e-107 386
WERAM-Cap-0083 ENSCPOP00000005971.2 Cavia porcellus 58 2e-107 386
WERAM-Aim-0104 ENSAMEP00000010054.1 Ailuropoda melanoleuca 57 2e-107 386
WERAM-Mup-0199 ENSMPUP00000017162.1 Mustela putorius furo 57 2e-107 386
WERAM-Gaa-0111 ENSGACP00000014764.1 Gasterosteus aculeatus 57 2e-107 386
WERAM-Tut-0131 ENSTTRP00000010611.1 Tursiops truncatus 58 2e-107 386
WERAM-Gaga-0055 ENSGALP00000008151.4 Gallus gallus 58 4e-107 385
WERAM-Orc-0095 ENSOCUP00000008476.2 Oryctolagus cuniculus 58 5e-107 385
WERAM-Ptv-0049 ENSPVAP00000005253.1 Pteropus vampyrus 58 5e-107 384
WERAM-Ocp-0102 ENSOPRP00000009462.1 Ochotona princeps 57 1e-106 384
WERAM-Mam-0008 ENSMMUP00000001824.2 Macaca mulatta 58 1e-106 383
WERAM-Paa-0195 ENSPANP00000003035.1 Papio anubis 58 2e-106 382
WERAM-Chs-0115 ENSCSAP00000005710.1 Chlorocebus sabaeus 58 6e-106 381
WERAM-Bot-0074 ENSBTAP00000009482.5 Bos taurus 57 8e-106 380
WERAM-Anc-0120 ENSACAP00000011278.3 Anolis carolinensis 58 1e-105 380
WERAM-Ran-0042 ENSRNOP00000008962.5 Rattus norvegicus 57 3e-105 379
WERAM-Mum-0132 ENSMUSP00000043828.4 Mus musculus 57 5e-105 378
WERAM-Tag-0056 ENSTGUP00000003927.1 Taeniopygia guttata 59 1e-104 377
WERAM-Dio-0089 ENSDORP00000009107.1 Dipodomys ordii 58 1e-104 377
WERAM-Otg-0083 ENSOGAP00000006490.2 Otolemur garnettii 58 5e-104 375
WERAM-Orn-0036 ENSONIP00000004088.1 Oreochromis niloticus 59 7e-104 374
WERAM-Sah-0048 ENSSHAP00000005466.1 Sarcophilus harrisii 57 2e-103 372
WERAM-Pem-0019 ENSPMAP00000002586.1 Petromyzon marinus 54 9e-103 370
WERAM-Mae-0056 ENSMEUP00000005580.1 Macropus eugenii 57 1e-102 370
WERAM-Mod-0065 ENSMODP00000010728.2 Monodelphis domestica 57 2e-100 362
WERAM-Nol-0049 ENSNLEP00000005908.2 Nomascus leucogenys 60 4e-100 362
WERAM-Fec-0086 ENSFCAP00000006953.3 Felis catus 58 6e-100 361
WERAM-Caf-0054 ENSCAFP00000006551.3 Canis familiaris 58 7e-100 361
WERAM-Cis-0041 ENSCSAVP00000009072.1 Ciona savignyi 56 1e-99 360
WERAM-Sus-0082 ENSSSCP00000012372.2 Sus scrofa 54 1e-98 357
WERAM-Dar-0190 ENSDARP00000109681.2 Danio rerio 55 3e-98 355
WERAM-Lac-0082 ENSLACP00000010626.1 Latimeria chalumnae 54 7e-95 344
WERAM-Gam-0017 ENSGMOP00000001513.1 Gadus morhua 53 3e-93 339
WERAM-Fia-0001 ENSFALP00000000041.1 Ficedula albicollis 61 1e-90 330
WERAM-Mim-0127 ENSMICP00000012962.1 Microcebus murinus 52 3e-89 325
WERAM-Cii-0063 ENSCINP00000027979.2 Ciona intestinalis 56 7e-88 321
WERAM-Asm-0175 ENSAMXP00000017267.1 Astyanax mexicanus 62 1e-85 313
WERAM-Ova-0011 ENSOARP00000001712.1 Ovis aries 50 2e-85 313
WERAM-Drm-0083 FBpp0084109 Drosophila melanogaster 51 3e-85 312
WERAM-Ict-0088 ENSSTOP00000009419.2 Ictidomys tridecemlineatus 58 7e-84 308
WERAM-Cae-0036 C35A5.9 Caenorhabditis elegans 46 4e-81 298
WERAM-Dan-0117 ENSDNOP00000014714.2 Dasypus novemcinctus 58 3e-79 292
WERAM-Prc-0001 ENSPCAP00000000121.1 Procavia capensis 47 6e-78 288
WERAM-Chr-0007 EDP00102 Chlamydomonas reinhardtii 48 4e-71 265
WERAM-Pat-0124 ENSPTRP00000025262.3 Pan troglodytes 61 2e-65 246
WERAM-Orl-0079 KN539689.1_FGP004 Oryza longistaminata 60 5e-62 235
WERAM-Chh-0019 ENSCHOP00000001858.1 Choloepus hoffmanni 36 1e-49 194
WERAM-Amt-0062 ERN16364 Amborella trichopoda 73 3e-45 179
WERAM-Tub-0108 ENSTBEP00000012162.1 Tupaia belangeri 55 9e-45 177
WERAM-Ect-0025 ENSETEP00000001831.1 Echinops telfairi 38 1e-41 167
WERAM-Ora-0107 ENSOANP00000020314.1 Ornithorhynchus anatinus 54 2e-39 160
WERAM-Tar-0078 ENSTRUP00000015330.1 Takifugu rubripes 32 5e-34 142
WERAM-Caj-0177 ENSCJAP00000031023.1 Callithrix jacchus 53 1e-32 137
WERAM-Osl-0038 ABO99879 Ostreococcus lucimarinus 30 2e-27 120
WERAM-Cym-0025 CMQ158CT Cyanidioschyzon merolae 31 2e-24 110
WERAM-Xet-0128 ENSXETP00000044353.3 Xenopus tropicalis 28 3e-22 103
WERAM-Tas-0086 ENSTSYP00000008784.1 Tarsius syrichta 26 1e-18 91.3
WERAM-Miv-0013 MVLG_01994T0 Microbotryum violaceum 26 2e-17 87.8
WERAM-Asg-0010 AAS51704 Ashbya gossypii 27 2e-17 87.4
WERAM-Vip-0110 ENSVPAP00000010202.1 Vicugna pacos 25 2e-17 87.4
WERAM-Lab-0002 EDR16061 Laccaria bicolor 28 4e-17 86.3
WERAM-Trr-0017 EGR48353 Trichoderma reesei 27 3e-16 83.6
WERAM-Crn-0011 AAW42664 Cryptococcus neoformans 27 4e-16 82.8
WERAM-Ten-0066 ENSTNIP00000008499.1 Tetraodon nigroviridis 27 5e-16 82.8
WERAM-Scj-0003 EEB05565 Schizosaccharomyces japonicus 25 6e-16 82.4
WERAM-Soa-0084 ENSSARP00000008041.1 Sorex araneus 27 7e-16 82.4
Created Date 25-Jun-2016