WERAM Information

Tag Content
WERAM ID WERAM-Tra-0027
Ensembl Protein ID Traes_1DL_4F47319EC.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Traes_1DL_4F47319EC Traes_1DL_4F47319EC.1 Traes_1DL_4F47319EC.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 6.90e-12 47.6 177 227
Organism Triticum aestivum
Domain Profile
  Me_Reader PHD
                PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                            t+C +Cg++d +++++++Cd+C++w+H+kCvk++  +++  k++ Cp C +
  Traes_1DL_4F47319EC.1 177 TLCGTCGTNDGKDEFWICCDNCERWYHGKCVKITPARAEHIKHYKCPDCSN 227
                            78****998888999*******************666664479******86 PP
Protein Sequence
(Fasta)		MIKALTQEVD KFYQLCDPEK ENLCLYGYPN ETWEVTLPAE EVPPEIPEPA LGINFARDGM 60
NEKDWLALVA VHSDSWLLAV SFYFAARFGF DKEARRRLFN MINNLPTIFE VVTGAAKKQI 120
KEKAPNSTHK SNNKPSMKTY SKPESQSKAP KIAAPPKDED ESGEDYGEEE EEERDNTLCG 180
TCGTNDGKDE FWICCDNCER WYHGKCVKIT PARAEHIKHY KCPDCSNKRA RA 232
Nucleotide Sequence
(Fasta)		CGCACGGCGG AGGAGGTCTT CCGCGACTTC CGCGGCCGCC GCGCCGGCAT GATCAAGGCC 60
CTCACCCAAG AAGTGGACAA GTTCTACCAG CTCTGCGACC CCGAAAAGGA GAACTTGTGC 120
CTTTATGGGT ACCCTAATGA AACATGGGAA GTGACGTTGC CTGCTGAGGA AGTCCCCCCA 180
GAGATTCCTG AACCAGCACT TGGAATCAAC TTTGCTAGGG ATGGCATGAA CGAGAAGGAT 240
TGGCTGGCAC TAGTTGCTGT TCACAGTGAT TCCTGGTTGT TGGCTGTTTC ATTCTACTTC 300
GCGGCACGGT TTGGATTTGA CAAAGAGGCA AGGAGGCGAC TCTTCAACAT GATAAATAAC 360
CTGCCTACAA TATTTGAAGT CGTGACTGGG GCTGCAAAGA AGCAGATCAA GGAGAAGGCC 420
CCCAACAGTA CGCACAAAAG CAATAATAAG CCAAGCATGA AAACTTATTC AAAGCCTGAG 480
TCCCAGTCAA AGGCCCCAAA GATAGCAGCG CCCCCAAAGG ATGAAGATGA GAGCGGCGAG 540
GACTATGGAG AAGAAGAGGA GGAAGAGCGC GACAACACCT TGTGTGGTAC CTGTGGAACA 600
AACGACGGCA AGGACGAGTT CTGGATCTGC TGCGACAACT GCGAGCGGTG GTATCATGGG 660
AAATGCGTCA AGATCACGCC TGCTCGAGCC GAGCACATCA AGCACTACAA GTGCCCAGAC 720
TGCAGCAACA AGAGGGCGAG GGCGTAACGG CGACAAACAG CACCAGCAGG GCGGCAGGAC 780
TCGGAATGGA ACCAGCGCCA GCACCAAATC GTCATCGTCG ATGCCTGCTG CAGCCTGCAG 840
ATATGGCCTA GCTGTCTAGC TCATCATAGA CTCGCCTTTC GTTTCAGTCG AACACTGTTG 900
ATTCACCCTT GACCCTGCAG TTCGTTCATG TTGGTCCGAC TCTTCACTTG TGTGTTTTAA 960
ACCGTTGGTT GGTTGGTGTA GTAGTGTTGT ACCAGCTTCG ATCTCTTCAG CGGACATGTC 1020
GAAGACGTTC TTCAACTGAA AGGACCCGAA AGCTGACACC ATTGTTTCTG GCTTTGTTAG 1080
CCTCGTCTCG TTCCTGGGCA TATATATATA TCCATCTTGC TGGTCT 1127
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Aet-0106 EMT19247 Aegilops tauschii 100 1e-115 412
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 95 7e-109 390
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 94 2e-107 385
WERAM-Sei-0086 Si023009m Setaria italica 88 6e-103 370
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 88 1e-102 369
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 85 4e-98 354
WERAM-Orp-0050 OPUNC05G14790.1 Oryza punctata 90 6e-98 353
WERAM-Ors-0048 OS05T0419100-01 Oryza sativa 90 9e-98 353
WERAM-Orni-0049 ONIVA05G17440.1 Oryza nivara 90 9e-98 353
WERAM-Orm-0051 OMERI05G14570.1 Oryza meridionalis 90 9e-98 353
WERAM-Ori-0060 BGIOSGA019887-PA Oryza indica 90 9e-98 353
WERAM-Orgl-0053 OGLUM05G17790.1 Oryza glumaepatula 90 9e-98 353
WERAM-Org-0052 ORGLA05G0145200.1 Oryza glaberrima 90 9e-98 353
WERAM-Orb-0052 OBART05G16780.1 Oryza barthii 90 9e-98 353
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 91 1e-97 353
WERAM-Orbr-0061 OB05G24700.1 Oryza brachyantha 88 2e-96 348
WERAM-Orr-0054 ORUFI05G17990.1 Oryza rufipogon 81 6e-94 340
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 84 3e-90 328
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 78 1e-88 322
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 71 6e-80 294
WERAM-Amt-0088 ERM99796 Amborella trichopoda 72 2e-79 292
WERAM-Prp-0082 EMJ27202 Prunus persica 69 2e-79 292
WERAM-Glm-0084 GLYMA07G40165.1 Glycine max 69 6e-78 287
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 70 2e-77 285
WERAM-Thc-0077 EOY27191 Theobroma cacao 70 3e-77 285
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 67 4e-77 284
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 66 4e-76 281
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 67 5e-76 281
WERAM-Met-0056 AES67803 Medicago truncatula 66 5e-76 281
WERAM-Art-0035 AT2G02470.1 Arabidopsis thaliana 67 5e-76 280
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 64 3e-73 271
WERAM-Brr-0091 Bra017415.1-P Brassica rapa 64 3e-73 271
WERAM-Php-0091 PP1S38_137V6.1 Physcomitrella patens 64 2e-67 252
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 62 5e-64 241
Created Date 25-Jun-2016