WERAM Information

Tag Content
WERAM ID WERAM-Tra-0012
Ensembl Protein ID Traes_1BL_1B2A57A5B.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Traes_1BL_1B2A57A5B Traes_1BL_1B2A57A5B.1 Traes_1BL_1B2A57A5B.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 4.80e-12 48.1 118 168
Organism Triticum aestivum
Domain Profile
  Me_Reader PHD
                PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                            t+C +Cg++d +++++++Cd+C++w+H+kCvk++  +++  k++ Cp C +
  Traes_1BL_1B2A57A5B.1 118 TLCGTCGTNDGKDEFWICCDNCERWYHGKCVKITPARAEHIKHYKCPDCSN 168
                            78****999988999*******************666664479******86 PP
Protein Sequence
(Fasta)		MNEKDWLALV AVHSDSWLLA VSFYFAARFG FDKEARRRLF NMINNLPTIF EVVTGAAKKQ 60
IKEKAPNSTH KSNNKPSMKT YSKPESQSKA PKIAAPPKDE DESGEDYGEE EEEERDNTLC 120
GTCGTNDGKD EFWICCDNCE RWYHGKCVKI TPARAEHIKH YKCPDCSNKR ARA 173
Nucleotide Sequence
(Fasta)		CAGAAAAGGA GAACTTGTGC CTTTATGGGT ACCCTAATGA AACATGGGAA GTGACGTTGC 60
CTGCTGAGGA AGTTCCCCCA GAGATTCCTG AACCAGCACT TGGAATCAAC TTTGCTAGGG 120
ATGGCATGAA CGAGAAGGAT TGGTTGGCAC TAGTTGCTGT TCACAGTGAT TCCTGGTTGT 180
TGGCTGTTTC ATTCTACTTC GCGGCACGGT TTGGATTTGA CAAAGAGGCA AGGAGGCGAC 240
TCTTCAACAT GATAAATAAC CTGCCTACAA TATTTGAAGT CGTGACTGGG GCTGCAAAGA 300
AGCAGATCAA GGAGAAGGCC CCCAACAGTA CGCACAAGAG CAATAATAAG CCAAGCATGA 360
AAACTTATTC AAAGCCTGAG TCCCAATCAA AGGCCCCAAA GATAGCAGCG CCCCCAAAGG 420
ATGAAGATGA GAGCGGCGAG GACTATGGAG AAGAAGAGGA GGAAGAGCGC GACAACACCT 480
TGTGTGGTAC CTGTGGAACA AACGACGGCA AGGACGAGTT CTGGATCTGC TGCGACAACT 540
GCGAGCGGTG GTATCATGGG AAATGCGTCA AGATCACGCC TGCTCGAGCC GAGCATATCA 600
AGCACTACAA GTGCCCAGAC TGCAGCAACA AGAGGGCGAG GGCGTAACTG CGACAAACCA 660
GCACCAGCAG GGCGGCAGGA CTCGGAATGG AACCAGCGCC AGCACCAAAT CGTCATTGTC 720
GATGCCTGCT GCAGCCTGCA GATATGGCCT AGCTCTCTAG CTCATCATAG ACTCGCTTTT 780
CGTTTCAGTC GAACACTGTT GATTACCCTT GACCCTGCAG TTCGTTCATG TTGGTCCGAC 840
TCTTGACTTG TGTGTGTGTT TAAACTGTTG GTTGGTGTAG TAGTGTACCA GCTTGGATCT 900
CTTCAGCGGA CATGTCAAAG GCGTTCTTCA ACTGAAAGGA CCCGAAAGCT GACACCATTG 960
TTTCTGGCTT TGTTAGCCTC GTCTCGTTCC TGGGCATATA TATATCCATC TTGCTGGTCT 1020
TGTTCCCTGG CTTTAGCTAT TGTTGGCATA CCACATTCCA GCCCAGCTTC TGTGCATAGC 1080
CCCAAAGCGT AATGCATACG TGTTAACGTA ATAGTAGACC AGTGTATTTT TAGCCTTCTT 1140
TCCATTAGTT AATCTGTCTC CTACAAGTTA TTAGGTTGCC TTGATTTTAT TAGTTACTTT 1200
AGGTTCTTTT ATCCTTTTGG TATGATTTCT GTTGTCTCCT TAGCATTGTC GAGAACTGGG 1260
1261
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Aet-0106 EMT19247 Aegilops tauschii 100 6e-88 320
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 94 4e-81 297
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 92 3e-80 294
WERAM-Sei-0086 Si023009m Setaria italica 86 1e-76 282
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 86 2e-76 281
WERAM-Orbr-0061 OB05G24700.1 Oryza brachyantha 88 5e-73 270
WERAM-Orl-0047 KN538945.1_FGP004 Oryza longistaminata 88 4e-72 267
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 82 5e-72 266
WERAM-Orp-0050 OPUNC05G14790.1 Oryza punctata 88 7e-72 266
WERAM-Ors-0048 OS05T0419100-01 Oryza sativa 88 8e-72 266
WERAM-Orni-0049 ONIVA05G17440.1 Oryza nivara 88 8e-72 266
WERAM-Orm-0051 OMERI05G14570.1 Oryza meridionalis 88 8e-72 266
WERAM-Ori-0060 BGIOSGA019887-PA Oryza indica 88 8e-72 266
WERAM-Orgl-0053 OGLUM05G17790.1 Oryza glumaepatula 88 8e-72 266
WERAM-Org-0052 ORGLA05G0145200.1 Oryza glaberrima 88 8e-72 266
WERAM-Orb-0052 OBART05G16780.1 Oryza barthii 88 8e-72 266
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 90 1e-71 265
WERAM-Orr-0054 ORUFI05G17990.1 Oryza rufipogon 76 4e-68 254
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 73 3e-63 237
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 67 5e-57 217
WERAM-Prp-0082 EMJ27202 Prunus persica 64 8e-57 216
WERAM-Glm-0204 GLYMA16G00680.1 Glycine max 64 9e-57 216
WERAM-Amt-0088 ERM99796 Amborella trichopoda 67 6e-56 213
WERAM-Met-0056 AES67803 Medicago truncatula 62 2e-55 212
WERAM-Thc-0104 EOY29997 Theobroma cacao 67 8e-55 209
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 65 2e-54 208
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 66 3e-54 207
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 60 8e-54 206
WERAM-Art-0035 AT2G02470.1 Arabidopsis thaliana 61 1e-53 206
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 61 4e-53 204
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 59 4e-51 197
WERAM-Brr-0091 Bra017415.1-P Brassica rapa 59 4e-51 197
WERAM-Php-0091 PP1S38_137V6.1 Physcomitrella patens 60 3e-46 181
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 57 4e-42 167
WERAM-Tru-0076 TRIUR3_28057-P1 Triticum urartu 55 1e-41 166
Created Date 25-Jun-2016