WERAM Information

Tag Content
WERAM ID WERAM-Sol-0102
Ensembl Protein ID Solyc08g065350.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc08g065350.2 Solyc08g065350.2.1 Solyc08g065350.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 9.20e-29 101.7 38 325
Organism Solanum lycopersicum
Domain Profile
  HDAC Class-I
         class-1.txt   4 ayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPv 94 
                          y  + d++ + +++ hp   +++  +  ++++ g++ + ++v+p +a++++ll +hse y++ l+++ +    +++ e+   ++  +c v
  Solyc08g065350.2.1  38 IYSSSYDIAFFGIEKLHPFDSSKWGRICRFLTKEGIMDQKHVVEPVEATKDDLLVVHSESYLKSLNSSLN---VSMIIEVPPVAMLPNCLV 125
                         5778889999999************************************************999987643...44555788999999**** PP
         class-1.txt  95 fdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlail.ellk.khkrvlyididlhhGDgveeafyttd 183
                          +++ +  +   G+++ aa kL  ke+  ain  GG+hh   ++  Gfc   Di l i   + + + +rv+ id+d h G+g e  f+   
  Solyc08g065350.2.1 126 QKKVLHPFRKQVGGTILAA-KLA-KERGWAINVGGGFHHCSSEKGGGFCVYADISLCIHfAFVRlNISRVMIIDLDAHQGNGHEMDFSDDR 214
                         *999998889999999766.565.56789****************************9634555599************************ PP
         class-1.txt 184 rvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikgh 274
                         rv+ +    y++  +P          e  +y  + v +k g   ++y + + + ++   ++f+P+ +v + G+D l gD+lg  ++s +g+
  Solyc08g065350.2.1 215 RVFIL--DMYNPRIYP-------LDFEARRYIDLKVEVKSGTATDEYLTKLDHALEVAEKRFDPDFIVYNAGTDILDGDPLGRLKISPDGI 296
                         **986..568996666.......6778899***********9988888889999************************************9 PP
         class-1.txt 275 ae....cvkfvksfnlpllvlGGGGYtlr 299
                         a+    + +f ++  +pl++l  GGY + 
  Solyc08g065350.2.1 297 ASrdekVFRFARERSIPLIMLTSGGYMKS 325
                         84344489999999************865 PP
Protein Sequence
(Fasta)		MSSAASSSKT DDAEALRRSR ILSSPLYYDV PPSKVPLIYS SSYDIAFFGI EKLHPFDSSK 60
WGRICRFLTK EGIMDQKHVV EPVEATKDDL LVVHSESYLK SLNSSLNVSM IIEVPPVAML 120
PNCLVQKKVL HPFRKQVGGT ILAAKLAKER GWAINVGGGF HHCSSEKGGG FCVYADISLC 180
IHFAFVRLNI SRVMIIDLDA HQGNGHEMDF SDDRRVFILD MYNPRIYPLD FEARRYIDLK 240
VEVKSGTATD EYLTKLDHAL EVAEKRFDPD FIVYNAGTDI LDGDPLGRLK ISPDGIASRD 300
EKVFRFARER SIPLIMLTSG GYMKSSAKVI ADSIVNLSSK SLIDMKS 347
Nucleotide Sequence
(Fasta)		GAGAGTGTAT ATATACATAC ATACAGTCAA CATACACCTT CTGGTTCTCT CACACACGCC 60
TCAAACAAAA CCATCATCGC CATCAAAGCT GCTCGATATC TCAATCGTTT CACTTTCTGC 120
AACTTTTCTC TCCTCTCTGC ATCTCAATCA ATGTCATCCG CTGCCTCTTC CTCCAAAACC 180
GACGACGCTG AAGCTCTACG CCGTAGCCGT ATTCTCTCTA GCCCCCTATA TTACGATGTG 240
CCTCCTTCTA AGGTTCCGTT GATATACTCG TCATCCTACG ACATTGCTTT TTTTGGGATT 300
GAAAAACTGC ATCCATTTGA CTCTTCTAAA TGGGGTCGAA TCTGTCGGTT TCTCACTAAG 360
GAAGGTATCA TGGACCAAAA GCATGTAGTT GAGCCTGTGG AGGCAACTAA AGATGATCTG 420
CTAGTGGTGC ATTCTGAATC ATACCTGAAA AGTTTGAACA GCAGCTTGAA TGTCTCCATG 480
ATTATTGAGG TCCCTCCTGT TGCGATGCTT CCTAATTGCC TTGTGCAAAA GAAAGTGCTC 540
CACCCCTTCC GCAAGCAGGT GGGAGGAACA ATTTTGGCTG CAAAGCTTGC AAAAGAACGA 600
GGATGGGCTA TTAATGTTGG TGGTGGATTT CATCATTGCT CATCAGAGAA GGGAGGCGGT 660
TTTTGTGTTT ATGCTGATAT ATCTCTTTGT ATACATTTTG CATTTGTGCG TCTAAATATC 720
TCAAGGGTCA TGATAATTGA CCTTGATGCA CACCAAGGAA ATGGCCATGA AATGGACTTC 780
TCTGATGACA GAAGAGTCTT TATCCTTGAT ATGTACAATC CCAGAATTTA TCCACTTGAT 840
TTTGAAGCCA GGCGTTACAT TGATCTGAAA GTCGAAGTTA AGAGTGGGAC TGCGACAGAT 900
GAATACTTAA CTAAGCTAGA TCATGCACTT GAGGTTGCAG AGAAGAGATT TGATCCTGAT 960
TTCATTGTTT ATAATGCTGG TACTGATATC TTGGATGGGG ATCCACTTGG CAGGTTGAAG 1020
ATCAGTCCTG ATGGCATTGC TAGTAGGGAT GAAAAAGTTT TCAGGTTTGC TCGAGAGAGA 1080
AGCATCCCCC TCATCATGCT CACATCAGGC GGTTACATGA AATCGAGTGC CAAAGTTATT 1140
GCTGATTCCA TCGTAAATCT CTCTAGTAAA TCCCTGATAG ATATGAAGAG CTAGCTTACT 1200
AACTGGGCAA GCATGTCTTT GCATAGCTAC TTAAAAAGGC CTGAAATTGA CCTATGTGGT 1260
AAAGTCGAGA TTGCTCATTT GTGTTGTAAG GAAATAGATT AACTTCCCTT GATAGTGAAT 1320
GCTTGTATGG GATTCTAGAG ATGGGAAAAG CAGAGGCGAA CTTGTGAAGA TTTGTGTGCC 1380
TTAATGCATT TAGGCTAGAA TGTAAATTGT GTAAGTGCTA GTTCATGTTC ATGTAGCTTG 1440
AAATCATTGA TACGTCAGGA TATGGTCTCT GCTGTCATGG ATTGTGATGC AGGAAGGAGC 1500
ATAATTTAAC GTTATGGCTC AATCTTGGCA ATAGATTGGA ACCTGTTTGT ACGTTGTTGT 1560
GCTTATGTTG ATTATCTAGA GAGTTGTGCA ATCAAGTTCT CGTCGTACCT CCTGTAGTCC 1620
TATCTCATGT TTCCAGCAGC CCATATGATG TTAAAGTCAT ATCCAGAGAC TTCATTTATG 1680
TTGGTCTATA TGGCTTCAAA TGCCCATCTC TCCCTCTACT GGAAAATGGA AATAGACATA 1740
AAACCATTTC CTTATCAGGG TCATCTTTTA CCCTATTGAT TTGCTGTCTC TTTCTAATCA 1800
TTTCCCCTTG AAACCCCTGT TAGCATACTT ACTGAGATTT GATGTAGTAA ACTAAAGAAA 1860
ACAAAATTAT GACAGAACAA TAGATCTAGA GGGTTAGAAA TGACGGATCT ATTAATCATG 1920
TTATATGAGT TTTTTTTTTT TTTTTTGCTT AATAATAAGA CTTATCA 1968
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Viv-0015 VIT_04s0008g00910.t01 Vitis vinifera 82 1e-166 583
WERAM-Glm-0229 GLYMA17G34770.1 Glycine max 80 7e-163 570
WERAM-Pot-0080 POPTR_0006s24640.1 Populus trichocarpa 79 7e-162 566
WERAM-Met-0014 AES59273 Medicago truncatula 79 1e-159 559
WERAM-Mua-0015 GSMUA_Achr10P28050_001 Musa acuminata 78 4e-156 548
WERAM-Art-0129 AT5G26040.2 Arabidopsis thaliana 75 2e-153 539
WERAM-Arl-0095 fgenesh2_kg.6__ 2585__ AT5G26040.2 Arabidopsis lyrata 75 2e-153 539
WERAM-Thc-0103 EOY29884 Theobroma cacao 76 4e-153 538
WERAM-Orgl-0063 OGLUM06G20210.1 Oryza glumaepatula 76 1e-152 536
WERAM-Ors-0058 OS06T0571100-01 Oryza sativa 76 3e-152 535
WERAM-Orni-0064 ONIVA06G22840.1 Oryza nivara 76 3e-152 535
WERAM-Ori-0066 BGIOSGA021002-PA Oryza indica 76 3e-152 535
WERAM-Org-0062 ORGLA06G0157900.1 Oryza glaberrima 76 3e-152 535
WERAM-Orb-0065 OBART06G18360.1 Oryza barthii 76 3e-152 535
WERAM-Orr-0066 ORUFI06G20130.1 Oryza rufipogon 75 7e-152 533
WERAM-Brd-0021 BRADI1G37510.1 Brachypodium distachyon 75 4e-151 531
WERAM-Sei-0028 Si006784m Setaria italica 72 5e-150 527
WERAM-Bro-0132 Bo7g095520.1 Brassica oleracea 74 1e-149 526
WERAM-Brr-0052 Bra009877.1-P Brassica rapa 74 1e-149 526
WERAM-Zem-0011 GRMZM2G008425_P01 Zea mays 71 3e-149 525
WERAM-Tra-0321 Traes_7DL_86EEFA04E.2 Triticum aestivum 72 3e-148 521
WERAM-Sob-0134 Sb10g022550.1 Sorghum bicolor 71 6e-148 520
WERAM-Orbr-0073 OB06G26590.1 Oryza brachyantha 71 7e-138 487
WERAM-Orm-0062 OMERI06G19350.1 Oryza meridionalis 70 1e-136 483
WERAM-Sem-0048 EFJ15307 Selaginella moellendorffii 66 6e-134 474
WERAM-Aet-0055 EMT26973 Aegilops tauschii 63 2e-132 469
WERAM-Tru-0023 TRIUR3_12206-P1 Triticum urartu 72 4e-131 464
WERAM-Prp-0064 EMJ26901 Prunus persica 78 8e-131 463
WERAM-Sot-0090 PGSC0003DMT400076986 Solanum tuberosum 97 3e-130 462
WERAM-Lep-0065 LPERR06G15640.1 Leersia perrieri 72 4e-130 461
WERAM-Php-0113 PP1S53_217V6.1 Physcomitrella patens 65 5e-130 461
WERAM-Pof-0112 ENSPFOP00000009813.1 Poecilia formosa 59 6e-114 407
WERAM-Xim-0081 ENSXMAP00000007517.1 Xiphophorus maculatus 58 9e-113 404
WERAM-Hov-0085 MLOC_6441.1 Hordeum vulgare 72 4e-111 398
WERAM-Pes-0146 ENSPSIP00000017189.1 Pelodiscus sinensis 59 2e-110 395
WERAM-Leo-0143 ENSLOCP00000017300.1 Lepisosteus oculatus 58 7e-110 394
WERAM-Orla-0136 ENSORLP00000016174.1 Oryzias latipes 59 7e-110 394
WERAM-Gaga-0055 ENSGALP00000008151.4 Gallus gallus 59 5e-109 391
WERAM-Anp-0099 ENSAPLP00000011801.1 Anas platyrhynchos 59 5e-109 391
WERAM-Meg-0057 ENSMGAP00000005254.2 Meleagris gallopavo 58 9e-109 390
WERAM-Mup-0199 ENSMPUP00000017162.1 Mustela putorius furo 57 1e-108 390
WERAM-Mam-0008 ENSMMUP00000001824.2 Macaca mulatta 57 2e-108 389
WERAM-Aim-0104 ENSAMEP00000010054.1 Ailuropoda melanoleuca 57 2e-108 389
WERAM-Gaa-0111 ENSGACP00000014764.1 Gasterosteus aculeatus 57 3e-108 389
WERAM-Cap-0083 ENSCPOP00000005971.2 Cavia porcellus 57 3e-108 389
WERAM-Poa-0118 ENSPPYP00000014982.2 Pongo abelii 57 3e-108 389
WERAM-Paa-0195 ENSPANP00000003035.1 Papio anubis 57 5e-108 388
WERAM-Gog-0090 ENSGGOP00000007570.2 Gorilla gorilla 57 6e-108 387
WERAM-Ptv-0049 ENSPVAP00000005253.1 Pteropus vampyrus 57 7e-108 387
WERAM-Hos-0174 ENSP00000295757.3 Homo sapiens 57 7e-108 387
WERAM-Tut-0131 ENSTTRP00000010611.1 Tursiops truncatus 56 9e-108 387
WERAM-Orc-0095 ENSOCUP00000008476.2 Oryctolagus cuniculus 57 1e-107 386
WERAM-Loa-0005 ENSLAFP00000000421.3 Loxodonta africana 56 2e-107 386
WERAM-Eqc-0015 ENSECAP00000002522.1 Equus caballus 57 3e-107 385
WERAM-Chs-0115 ENSCSAP00000005710.1 Chlorocebus sabaeus 57 3e-107 385
WERAM-Myl-0189 ENSMLUP00000015766.2 Myotis lucifugus 57 5e-107 384
WERAM-Bot-0074 ENSBTAP00000009482.5 Bos taurus 57 6e-107 384
WERAM-Ocp-0102 ENSOPRP00000009462.1 Ochotona princeps 56 3e-106 382
WERAM-Anc-0120 ENSACAP00000011278.3 Anolis carolinensis 57 1e-105 380
WERAM-Orn-0036 ENSONIP00000004088.1 Oreochromis niloticus 62 2e-105 380
WERAM-Dio-0089 ENSDORP00000009107.1 Dipodomys ordii 57 2e-105 379
WERAM-Ran-0042 ENSRNOP00000008962.5 Rattus norvegicus 56 6e-105 378
WERAM-Mum-0132 ENSMUSP00000043828.4 Mus musculus 56 8e-105 377
WERAM-Pem-0019 ENSPMAP00000002586.1 Petromyzon marinus 55 1e-104 377
WERAM-Tag-0056 ENSTGUP00000003927.1 Taeniopygia guttata 59 2e-104 376
WERAM-Sah-0048 ENSSHAP00000005466.1 Sarcophilus harrisii 57 2e-104 375
WERAM-Otg-0083 ENSOGAP00000006490.2 Otolemur garnettii 56 6e-104 374
WERAM-Mae-0056 ENSMEUP00000005580.1 Macropus eugenii 56 6e-103 371
WERAM-Orp-0063 OPUNC06G17220.1 Oryza punctata 75 2e-102 369
WERAM-Mod-0065 ENSMODP00000010728.2 Monodelphis domestica 54 1e-101 367
WERAM-Caf-0054 ENSCAFP00000006551.3 Canis familiaris 58 4e-101 365
WERAM-Fec-0086 ENSFCAP00000006953.3 Felis catus 58 4e-101 365
WERAM-Nol-0049 ENSNLEP00000005908.2 Nomascus leucogenys 58 2e-100 362
WERAM-Cis-0041 ENSCSAVP00000009072.1 Ciona savignyi 54 2e-99 359
WERAM-Dar-0190 ENSDARP00000109681.2 Danio rerio 55 8e-99 357
WERAM-Sus-0082 ENSSSCP00000012372.2 Sus scrofa 53 2e-98 356
WERAM-Lac-0082 ENSLACP00000010626.1 Latimeria chalumnae 53 3e-96 348
WERAM-Gam-0017 ENSGMOP00000001513.1 Gadus morhua 52 1e-93 340
WERAM-Fia-0001 ENSFALP00000000041.1 Ficedula albicollis 60 1e-91 333
WERAM-Mim-0127 ENSMICP00000012962.1 Microcebus murinus 50 7e-90 328
WERAM-Ova-0011 ENSOARP00000001712.1 Ovis aries 51 3e-88 322
WERAM-Cae-0036 C35A5.9 Caenorhabditis elegans 49 6e-88 321
WERAM-Cii-0063 ENSCINP00000027979.2 Ciona intestinalis 55 2e-87 320
WERAM-Asm-0175 ENSAMXP00000017267.1 Astyanax mexicanus 64 8e-87 317
WERAM-Drm-0083 FBpp0084109 Drosophila melanogaster 50 3e-86 316
WERAM-Ict-0088 ENSSTOP00000009419.2 Ictidomys tridecemlineatus 56 1e-83 307
WERAM-Dan-0117 ENSDNOP00000014714.2 Dasypus novemcinctus 57 5e-79 291
WERAM-Prc-0001 ENSPCAP00000000121.1 Procavia capensis 45 2e-77 286
WERAM-Chr-0007 EDP00102 Chlamydomonas reinhardtii 48 3e-74 276
WERAM-Pat-0124 ENSPTRP00000025262.3 Pan troglodytes 61 2e-67 253
WERAM-Orl-0079 KN539689.1_FGP004 Oryza longistaminata 57 7e-59 224
WERAM-Chh-0019 ENSCHOP00000001858.1 Choloepus hoffmanni 36 3e-49 192
WERAM-Amt-0062 ERN16364 Amborella trichopoda 67 3e-43 172
WERAM-Tub-0108 ENSTBEP00000012162.1 Tupaia belangeri 53 2e-42 170
WERAM-Ect-0025 ENSETEP00000001831.1 Echinops telfairi 36 1e-41 167
WERAM-Ora-0107 ENSOANP00000020314.1 Ornithorhynchus anatinus 56 2e-39 160
WERAM-Caj-0177 ENSCJAP00000031023.1 Callithrix jacchus 54 4e-35 146
WERAM-Tar-0078 ENSTRUP00000015330.1 Takifugu rubripes 31 2e-33 140
WERAM-Osl-0038 ABO99879 Ostreococcus lucimarinus 29 2e-26 117
WERAM-Cym-0025 CMQ158CT Cyanidioschyzon merolae 31 6e-24 108
WERAM-Xet-0128 ENSXETP00000044353.3 Xenopus tropicalis 26 7e-22 102
WERAM-Miv-0013 MVLG_01994T0 Microbotryum violaceum 27 4e-20 96.3
WERAM-Mel-0007 EGF99116 Melampsora laricipopulina 26 1e-18 91.3
WERAM-Trr-0017 EGR48353 Trichoderma reesei 26 2e-18 90.5
WERAM-Tas-0086 ENSTSYP00000008784.1 Tarsius syrichta 24 3e-18 90.1
WERAM-Lab-0002 EDR16061 Laccaria bicolor 29 5e-18 89.4
WERAM-Crn-0011 AAW42664 Cryptococcus neoformans 28 9e-18 88.2
WERAM-Trv-0003 EHK19072 Trichoderma virens 26 1e-17 87.8
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 25 2e-17 87.8
WERAM-Scp-0016 SPAC3G9.07c.1:pep Schizosaccharomyces pombe 25 3e-17 87.0
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 26 4e-17 86.3
WERAM-Ten-0066 ENSTNIP00000008499.1 Tetraodon nigroviridis 26 4e-17 86.3
WERAM-Scj-0027 EEB08472 Schizosaccharomyces japonicus 26 6e-17 85.5
WERAM-Caa-0034 KGT64501 Candida albicans 25 7e-17 85.5
Created Date 25-Jun-2016