WERAM Information

Tag Content
WERAM ID WERAM-Sol-0018
Ensembl Protein ID Solyc01g102760.2.1
Gene Name fin1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc01g102760.2 Solyc01g102760.2.1 Solyc01g102760.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.10e-12 48.7 193 243
Organism Solanum lycopersicum
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                         t+C +Cg++++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC  
  Solyc01g102760.2.1 193 TLCGACGDNYATDEFWICCDICERWFHGKCVKITPAKAEHIKQYKCPSCSS 243
                         68*****999999*********************555554479******85 PP
Protein Sequence
(Fasta)		MENTVPRTVE EVFNDFKGRR AGLIKALTTD VEKFYQSCDP EKENLCLYGL PNETWEVNLP 60
VEEVPPELPE PALGINFARD GMQEKDWLSL VAVHSDSWLL SVAFYFGARF GFGKSERKRL 120
FQMTNDLPTV FEVVTGAAKQ ARDAAHNNSS KSKSSGKPRQ PEPQPKEVKV SPPTMEDESG 180
EEEEEEEEEQ GATLCGACGD NYATDEFWIC CDICERWFHG KCVKITPAKA EHIKQYKCPS 240
CSSKRARV 248
Nucleotide Sequence
(Fasta)		CACCACCCCA CTTTCCTCTT TCTTCATGCT CTTCTCTCTC TCTCTCTATA TATCCGTTTC 60
TTACAATTTC TCTACTTGCT TCTCACAATT TCTCATGAAA ATTTGAGCTT TTCTCTTTAT 120
GAATCTTCAT TTTTCACAGC ACATAGCAAG CTATTTTTAA AGTTTTGGGC AACATGAAGA 180
GGAAACCCTA GTTCTTTGGG GAAAAAACCC TAATTTTCTT GTTTTTTTTC AAAGACTCGA 240
TTTTTTTCTT GTGGGGTTGT TAAAAATTGA GTGAAGAGAA GGATAATATG GAAAATACGG 300
TACCTAGGAC TGTAGAAGAA GTATTCAACG ATTTCAAAGG TCGTAGAGCT GGTTTAATTA 360
AAGCACTAAC TACAGATGTC GAGAAGTTCT ATCAGTCGTG TGATCCTGAA AAGGAGAACT 420
TGTGTCTCTA TGGGCTTCCT AATGAAACAT GGGAAGTAAA CCTCCCTGTT GAGGAGGTGC 480
CTCCAGAACT TCCGGAGCCA GCATTAGGCA TAAACTTTGC ACGTGATGGA ATGCAAGAGA 540
AAGACTGGTT ATCACTTGTT GCTGTTCATA GTGATTCATG GCTGCTTTCT GTTGCATTCT 600
ACTTTGGCGC ACGGTTTGGG TTTGGCAAGA GTGAAAGGAA GAGGCTTTTC CAAATGACAA 660
ATGATCTCCC AACAGTGTTT GAGGTTGTTA CTGGAGCTGC TAAGCAGGCA CGCGATGCCG 720
CTCACAACAA TAGCAGCAAA AGCAAATCAA GTGGAAAGCC TCGACAGCCA GAGCCCCAGC 780
CCAAGGAAGT AAAGGTGTCT CCACCTACAA TGGAGGATGA AAGTGGGGAG GAGGAGGAAG 840
AAGAAGAAGA AGAACAAGGG GCAACTCTCT GTGGAGCCTG TGGTGATAAT TATGCGACTG 900
ATGAATTCTG GATTTGCTGT GATATTTGTG AGAGATGGTT CCATGGCAAA TGTGTGAAGA 960
TTACCCCAGC AAAAGCTGAG CATATCAAGC AGTACAAGTG TCCCAGCTGC AGTAGCAAGA 1020
GAGCTAGAGT TTAAAATTTG TGGGACTTTT AGATCAACAT CAATTAAGTG GAGATGTTGG 1080
AAGGTCTAGG ACTTTTAGCT CAGTTATCAA ATGTAAGCTA TGTCAAAGTT AAATGTTTGC 1140
TGATGGAATT GGGATGTCCA TTTCATGAAC ATTTGCTTTC TGTTATCTTG CTTTCGGATT 1200
GTGTTTTAGA TGAAATTTGT GCCTGTTAAA ATCAAATCAA CCAA 1245
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 92 3e-110 394
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 84 9e-99 356
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 84 1e-98 356
WERAM-Pot-0035 POPTR_0003s04070.1 Populus trichocarpa 84 8e-97 350
WERAM-Prp-0081 EMJ24886 Prunus persica 85 7e-96 347
WERAM-Thc-0075 EOY26404 Theobroma cacao 78 1e-95 346
WERAM-Met-0117 KEH32736 Medicago truncatula 80 2e-95 345
WERAM-Arl-0043 fgenesh2_kg.1__ 1579__ AT1G14510.1 Arabidopsis lyrata 77 2e-92 335
WERAM-Art-0010 AT1G14510.1 Arabidopsis thaliana 76 6e-91 330
WERAM-Amt-0088 ERM99796 Amborella trichopoda 76 2e-90 329
WERAM-Brr-0124 Bra024817.1-P Brassica rapa 76 2e-87 319
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 73 2e-87 318
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 74 3e-86 315
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 77 6e-85 310
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 77 7e-85 310
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 77 7e-85 310
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 77 7e-85 310
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 77 7e-85 310
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 77 7e-85 310
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 77 7e-85 310
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 77 7e-85 310
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 77 7e-85 310
WERAM-Sob-0083 Sb05g007010.1 Sorghum bicolor 75 4e-84 308
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 77 6e-84 307
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 76 4e-82 301
WERAM-Brd-0116 BRADI4G40230.1 Brachypodium distachyon 71 9e-82 300
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 70 3e-81 298
WERAM-Sei-0086 Si023009m Setaria italica 70 3e-80 295
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 69 1e-79 293
WERAM-Aet-0106 EMT19247 Aegilops tauschii 67 1e-78 290
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 77 1e-77 286
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 66 8e-77 283
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 69 1e-76 283
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 67 3e-72 268
Created Date 25-Jun-2016