WERAM Information

Tag Content
WERAM ID WERAM-Sob-0049
Ensembl Protein ID Sb03g029565.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb03g029565 Sb03g029565.1 Sb03g029565.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 2.20e-21 76.5 72 143
Organism Sorghum bicolor
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssvq 72 
                    +h++ ++F  pvd++ l ++dYy+++  PmdL t+ +rle+++Y  p+ f++Dvrl f+Na+ yn++++ v+
  Sb03g029565.1  72 RHDDGWVFDAPVDARaLGLRDYYTVVADPMDLGTVLRRLERRRYVYPTAFADDVRLTFRNAMSYNDEGDPVY 143
                    599****************************************************************99987 PP
Protein Sequence
(Fasta)		MPRPKRPPPG FASEPRYPRP RPRTAAAASA PASAPASAPS PGGGAAGGGA GSCYDLSRAF 60
GRCRALLDDL LRHDDGWVFD APVDARALGL RDYYTVVADP MDLGTVLRRL ERRRYVYPTA 120
FADDVRLTFR NAMSYNDEGD PVYESAAELS GIFEARWASI EAELPHPLPP DDKLPRLPVA 180
RVPEKRDVRL RKKKGKMAGK ADAAALDELD LLVPDPEHGA DSPMQ 225
Nucleotide Sequence
(Fasta)		ATGCCGCGTC CAAAGCGCCC GCCGCCCGGC TTTGCCTCGG AGCCCAGGTA CCCGCGGCCG 60
CGGCCGCGGA CGGCGGCGGC GGCGTCGGCT CCAGCTTCCG CTCCCGCTTC GGCTCCGTCT 120
CCTGGGGGCG GCGCGGCAGG AGGCGGCGCC GGCAGCTGCT ACGATCTCAG CCGCGCGTTC 180
GGACGCTGCC GTGCGCTCCT GGACGACCTA CTGCGGCACG ACGACGGGTG GGTTTTCGAC 240
GCCCCTGTAG ACGCGCGCGC CCTCGGCCTC CGCGACTACT ACACCGTCGT CGCCGACCCC 300
ATGGATCTCG GCACCGTGCT CCGCCGCCTT GAGCGCCGCC GCTACGTCTA CCCAACCGCG 360
TTCGCGGACG ACGTCCGCCT CACGTTCCGG AACGCCATGT CATATAACGA CGAGGGCGAC 420
CCCGTTTACG AGAGCGCCGC CGAACTCTCC GGGATATTCG AGGCCAGGTG GGCTTCCATC 480
GAAGCGGAGC TCCCGCACCC GCTCCCGCCG GACGACAAGC TGCCGCGGTT GCCGGTGGCC 540
CGGGTCCCCG AGAAGCGGGA TGTGCGCCTG CGGAAGAAAA AGGGCAAGAT GGCGGGCAAG 600
GCGGATGCCG CGGCGCTGGA TGAGCTTGAC CTGCTGGTCC CAGACCCAGA GCATGGCGCC 660
GACTCCCCGA TGCAG 676
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sei-0013 Si002711m Setaria italica 67 9e-35 144
WERAM-Brd-0052 BRADI2G45190.1 Brachypodium distachyon 69 1e-27 120
WERAM-Orbr-0008 OB01G33830.1 Oryza brachyantha 71 2e-26 116
WERAM-Orp-0007 OPUNC01G24670.1 Oryza punctata 71 1e-25 114
WERAM-Orni-0006 ONIVA01G27980.1 Oryza nivara 72 1e-25 113
WERAM-Orm-0007 OMERI01G22470.1 Oryza meridionalis 72 1e-25 113
WERAM-Ors-0003 OS01T0648700-01 Oryza sativa 72 1e-25 113
WERAM-Org-0007 ORGLA01G0199400.1 Oryza glaberrima 72 1e-25 113
WERAM-Orr-0007 ORUFI01G27570.1 Oryza rufipogon 72 1e-25 113
WERAM-Orb-0006 OBART01G24650.1 Oryza barthii 72 1e-25 113
WERAM-Lep-0009 LPERR01G21120.1 Leersia perrieri 68 2e-25 112
WERAM-Ori-0004 BGIOSGA001116-PA Oryza indica 71 3e-25 112
WERAM-Orgl-0007 OGLUM01G28510.1 Oryza glumaepatula 71 3e-25 112
WERAM-Viv-0072 VIT_12s0028g02510.t01 Vitis vinifera 54 5e-25 111
WERAM-Aet-0018 EMT32508 Aegilops tauschii 63 1e-24 110
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 53 1e-24 110
WERAM-Thc-0011 EOX94205 Theobroma cacao 53 2e-24 110
WERAM-Hov-0074 MLOC_60367.1 Hordeum vulgare 67 2e-24 109
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 55 2e-24 109
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 55 3e-24 108
WERAM-Zem-0012 GRMZM2G010075_P01 Zea mays 56 5e-24 108
WERAM-Met-0055 KEH39253 Medicago truncatula 52 7e-24 107
WERAM-Bro-0090 Bo5g007360.1 Brassica oleracea 55 8e-24 107
WERAM-Glm-0172 GLYMA13G36821.1 Glycine max 53 1e-23 107
WERAM-Tru-0088 TRIUR3_32164-P1 Triticum urartu 66 2e-23 105
WERAM-Tra-0278 Traes_6DS_6D2C07E0F.2 Triticum aestivum 53 3e-23 105
WERAM-Brr-0160 Bra032431.1-P Brassica rapa 51 5e-23 104
WERAM-Amt-0025 ERN13953 Amborella trichopoda 48 4e-22 102
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 55 1e-21 100
WERAM-Sol-0141 Solyc12g014170.1.1 Solanum lycopersicum 50 2e-21 99.8
WERAM-Art-0014 AT1G17790.1 Arabidopsis thaliana 49 3e-21 99.0
WERAM-Pot-0017 POPTR_0001s38550.1 Populus trichocarpa 53 7e-21 97.8
WERAM-Prp-0055 EMJ15030 Prunus persica 51 1e-19 94.0
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 44 2e-18 89.7
WERAM-Sem-0092 EFJ05740 Selaginella moellendorffii 52 6e-15 78.2
WERAM-Cae-0070 Y119C1B.8a Caenorhabditis elegans 41 2e-14 76.3
Created Date 25-Jun-2016