WERAM Information

Tag Content
WERAM ID WERAM-Pot-0155
Ensembl Protein ID POPTR_0016s12420.1
Gene Name POPTR_0016s12420g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0016s12420 POPTR_0016s12420.1 POPTR_0016s12420.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.20e-12 48.9 183 233
Organism Populus trichocarpa
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                         t+C  Cg +++ +++++ Cd C++w+H+kCvk++  ++ + k++ CpsC++
  POPTR_0016s12420.1 183 TLCGSCGGNYNADEFWIGCDVCERWYHGKCVKITPAKADSIKQYKCPSCMK 233
                         78****888888889*******************555554489******97 PP
Protein Sequence
(Fasta)		MEMASSARTV EEIFKDFSAR RAAVVRALTH DVDAFYGLCD PDKENLCLYG HPSETWEVAL 60
PAEEVPPELP EPALGINFAR DGMNRKDWLS LVAVHSDSWL LSVAFYLGAR LNRNERKRLF 120
SLINDLPTVF EVVTERKPVK EKPSVDSGSK SRGSIKRSSD GQMKSNPKLM EDSYEDEEDH 180
TETLCGSCGG NYNADEFWIG CDVCERWYHG KCVKITPAKA DSIKQYKCPS CMKRSRS 237
Nucleotide Sequence
(Fasta)		AATTCTTAAA AAGTTTAATA AATAAATAAA ATTTCCGTTA TTTTAGATCT TTGTAATTAA 60
CTGTCTATGG AAATGGCTTC AAGCGCACGA ACTGTAGAGG AGATCTTCAA AGATTTCAGT 120
GCTAGAAGAG CTGCTGTTGT GCGTGCTTTA ACTCATGATG TGGATGCTTT TTATGGACTC 180
TGTGATCCAG ACAAGGAGAA TTTGTGTCTG TACGGACATC CAAGTGAGAC ATGGGAAGTA 240
GCCCTGCCAG CAGAAGAAGT TCCACCAGAG CTCCCTGAAC CTGCCCTTGG AATTAATTTT 300
GCTAGAGATG GGATGAACAG AAAAGACTGG CTTTCTCTTG TTGCTGTGCA CAGTGATTCA 360
TGGTTGCTTT CGGTGGCTTT CTATCTCGGT GCTCGTCTTA ATCGGAATGA GAGGAAACGA 420
CTATTCAGCT TGATCAATGA TCTGCCTACT GTCTTTGAAG TTGTAACAGA AAGGAAACCT 480
GTGAAAGAAA AGCCTAGTGT AGATAGTGGA AGCAAATCTC GAGGCAGCAT AAAGAGATCA 540
AGTGATGGAC AAATGAAAAG CAACCCTAAG CTTATGGAAG ATAGTTACGA GGATGAAGAA 600
GACCACACTG AAACGCTATG TGGGAGCTGT GGTGGAAATT ACAATGCTGA CGAATTCTGG 660
ATTGGCTGCG ATGTCTGCGA GAGGTGGTAC CATGGAAAGT GCGTGAAGAT AACACCCGCT 720
AAGGCTGACA GTATTAAGCA ATACAAGTGT CCATCTTGTA TGAAGAGGAG CCGGTCATAG 780
TCAGTGTCGT TGCAGTGGCA GACAAAGTAG TGTATTAACA TCACCTCTTA TGCAATGTGA 840
AAGTTAAAAA TGCTTGTTTA TAACAGATGC CCCCAACGGT TTAGTTTGCC TTCTTCCCAA 900
CTGAACCATT TGCTTAAATA GCAGGTTATG TAATCTGATC TCTTATTTTA TGTTAAATGC 960
ACGAATAACA TTACACC 978
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 86 2e-102 368
WERAM-Prp-0083 EMJ07006 Prunus persica 88 9e-99 356
WERAM-Thc-0059 EOY07191 Theobroma cacao 86 3e-98 355
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 81 2e-95 345
WERAM-Met-0092 KEH28874 Medicago truncatula 85 2e-95 345
WERAM-Sol-0105 Solyc09g005360.2.1 Solanum lycopersicum 81 8e-95 343
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 83 4e-94 341
WERAM-Mua-0107 GSMUA_Achr7P15530_001 Musa acuminata 77 6e-91 330
WERAM-Amt-0010 ERN05231 Amborella trichopoda 76 9e-87 316
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 78 1e-83 306
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 78 2e-83 305
WERAM-Brr-0171 Bra034860.1-P Brassica rapa 77 2e-83 305
WERAM-Bro-0102 Bo5g136750.1 Brassica oleracea 76 8e-83 303
WERAM-Lep-0074 LPERR07G06880.1 Leersia perrieri 66 2e-80 295
WERAM-Orm-0069 OMERI07G06560.1 Oryza meridionalis 72 2e-80 295
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 72 2e-80 295
WERAM-Org-0074 ORGLA07G0067800.1 Oryza glaberrima 72 2e-80 295
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 71 2e-80 295
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 67 4e-80 295
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 72 7e-80 293
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 72 7e-80 293
WERAM-Ori-0080 BGIOSGA024567-PA Oryza indica 72 7e-80 293
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 72 3e-79 291
WERAM-Zem-0157 GRMZM5G893976_P01 Zea mays 68 5e-79 291
WERAM-Sei-0119 Si030965m Setaria italica 67 7e-79 290
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 70 1e-78 289
WERAM-Sob-0020 Sb02g006980.1 Sorghum bicolor 67 5e-78 287
WERAM-Orbr-0050 OB03G45850.1 Oryza brachyantha 69 1e-75 279
WERAM-Brd-0027 BRADI1G53660.1 Brachypodium distachyon 63 2e-75 279
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 65 1e-74 276
WERAM-Php-0137 PP1S97_167V6.1 Physcomitrella patens 63 5e-74 274
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 65 9e-73 270
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 64 4e-72 268
WERAM-Aet-0099 EMT23706 Aegilops tauschii 58 8e-68 253
WERAM-Tru-0043 TRIUR3_20050-P1 Triticum urartu 62 1e-59 226
Created Date 25-Jun-2016