WERAM Information

Tag Content
WERAM ID WERAM-Pot-0011
Ensembl Protein ID POPTR_0001s29240.1
Gene Name POPTR_0001s29240g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0001s29240 POPTR_0001s29240.1 POPTR_0001s29240.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 4.40e-24 85.5 186 257
Organism Populus trichocarpa
Domain Profile
  Ac_Reader Bromodomain
           BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssvq 72 
                         +h++  +F+ pvd    +++dY+diik PmdL t+k++l ++ Y+sp +f++Dvrl fnNa++yn+++++v+
  POPTR_0001s29240.1 186 KHKLGYIFNSPVDVVgMQLHDYHDIIKSPMDLGTVKSKLTKNLYESPRDFAADVRLTFNNAMKYNPKGHEVY 257
                         799999***************************************************************997 PP
Protein Sequence
(Fasta)		MASAVLANRN EPSWTQPQPQ QRGGGAKFMG KIPFSNPNPK FSKKRQFQPP QQPQILDVDE 60
SPSAASDDAS SINRRPQNNH QDFNTGGFVT FNVGSYSKKE LIELKNRLVH ELEKIRDLKN 120
RIESSESQIR QSSNFSYKKQ TSTNKKVSGN KRPFPAPSNF NNLKRSNPEN AQLMKNCSQI 180
LSKLMKHKLG YIFNSPVDVV GMQLHDYHDI IKSPMDLGTV KSKLTKNLYE SPRDFAADVR 240
LTFNNAMKYN PKGHEVYMLA EQFLTRFEDF YRPIKEKVGD DFDEEENDQV QEVQASSWDH 300
IRREPERVNQ IDDDFMQVTA KSDPIGHQMH QQPLQQPTGL NQNPNLVRTP SPMRMPQVKP 360
VKQPKPKAKD PNKREMSLEE KHKLGVGLQS LPQEKMEQVV QIIRKRNGHL RQEGDEIELD 420
IEAVDTETLW ELDRFVTNYK KMVSKIKRQA LMGINNNVGA ISTSEGNNKV CELS 474
Nucleotide Sequence
(Fasta)		CAAACCCTAA CCCTTCACGT CTGTTTGATT TTTAATCTTT TGGGAGTTTC CAATTATATT 60
TTCTGGGCGC GCGTGGAGGC AAAATCCCTG CAACGCGTGT CAGTCACGCT CCACTTGATT 120
CATGTTAAAT GCTCACCGGA GATCTACCGG AATCGTACCG GACTCATGGC GTCAGCTGTC 180
TTAGCGAACC GGAACGAACC GAGTTGGACC CAGCCACAGC CACAGCAACG CGGTGGTGGA 240
GCTAAATTCA TGGGCAAGAT CCCTTTCTCT AACCCTAACC CTAAATTCTC CAAAAAACGC 300
CAATTTCAAC CACCACAACA ACCGCAAATC CTCGACGTCG ATGAGTCCCC GTCAGCCGCA 360
TCAGATGACG CGTCGTCGAT AAACCGCCGT CCACAGAACA ATCACCAAGA TTTCAACACC 420
GGAGGATTCG TGACGTTCAA TGTTGGCTCG TATTCAAAAA AAGAATTAAT CGAGCTAAAA 480
AATCGATTGG TTCATGAGCT TGAAAAGATC CGAGATTTGA AAAATAGAAT CGAATCCTCC 540
GAATCCCAGA TCCGGCAATC CTCCAATTTC AGCTACAAAA AACAAACCTC TACAAACAAG 600
AAAGTATCAG GCAACAAGCG GCCGTTTCCG GCTCCTTCAA ATTTTAACAA TTTGAAGCGA 660
TCGAATCCAG AGAATGCGCA ATTGATGAAG AATTGCAGTC AAATTTTGTC AAAATTGATG 720
AAGCACAAAT TAGGGTATAT TTTTAATTCT CCAGTTGATG TTGTTGGTAT GCAATTACAT 780
GATTATCATG ATATAATCAA GAGCCCAATG GATTTGGGTA CGGTAAAGTC AAAATTGACC 840
AAGAATTTGT ATGAATCGCC AAGGGATTTC GCTGCTGATG TTAGATTGAC TTTTAATAAT 900
GCTATGAAGT ATAACCCTAA GGGTCATGAG GTTTATATGC TCGCTGAGCA GTTTTTAACT 960
AGATTTGAGG ATTTCTATCG GCCGATTAAG GAGAAGGTGG GTGATGATTT TGATGAGGAG 1020
GAGAATGATC AAGTTCAAGA AGTGCAAGCG AGTTCTTGGG ATCATATTAG AAGAGAGCCA 1080
GAAAGGGTTA ATCAAATTGA TGATGATTTT ATGCAAGTTA CAGCGAAATC TGATCCAATT 1140
GGGCACCAGA TGCATCAGCA GCCACTACAG CAGCCAACTG GGTTGAATCA AAACCCTAAT 1200
TTGGTGAGGA CGCCTTCGCC AATGAGAATG CCCCAAGTGA AGCCAGTGAA GCAACCAAAA 1260
CCGAAAGCAA AGGATCCAAA TAAAAGAGAG ATGAGCCTCG AAGAGAAGCA TAAGCTGGGA 1320
GTGGGGTTGC AGAGTTTGCC ACAAGAGAAA ATGGAGCAAG TTGTGCAGAT TATTAGGAAG 1380
AGGAATGGGC ATTTGAGGCA AGAGGGTGAT GAGATTGAGC TTGATATTGA GGCTGTTGAT 1440
ACAGAGACGT TATGGGAGTT GGATCGGTTT GTGACTAATT ACAAGAAGAT GGTTAGCAAG 1500
ATAAAGCGGC AAGCTTTGAT GGGTATAAAC AACAATGTGG GTGCTATTTC TACCAGCGAA 1560
GGCAATAATA AGGTATGTGA ACTGTCCTAG 1591
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0024 EOX98601 Theobroma cacao 60 4e-129 458
WERAM-Glm-0189 GLYMA15G06570.1 Glycine max 60 2e-127 453
WERAM-Viv-0014 VIT_03s0097g00570.t01 Vitis vinifera 58 2e-119 427
WERAM-Met-0110 AES90546 Medicago truncatula 55 2e-115 413
WERAM-Sot-0009 PGSC0003DMT400008039 Solanum tuberosum 49 2e-99 360
WERAM-Sol-0021 Solyc01g106280.2.1 Solanum lycopersicum 49 5e-98 355
WERAM-Mua-0050 GSMUA_Achr3P00480_001 Musa acuminata 43 1e-79 294
WERAM-Amt-0058 ERN18099 Amborella trichopoda 42 3e-74 276
WERAM-Prp-0054 EMJ01899 Prunus persica 49 3e-68 256
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 39 3e-62 236
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 43 2e-61 234
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 44 2e-61 234
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 46 1e-60 231
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 45 3e-60 230
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 45 7e-60 228
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 45 1e-59 228
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 45 1e-59 228
WERAM-Sei-0009 Si001167m Setaria italica 44 2e-59 227
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 45 2e-59 227
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 45 2e-59 227
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 45 3e-59 226
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 45 3e-59 226
WERAM-Zem-0093 GRMZM2G167718_P01 Zea mays 43 1e-58 224
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 43 2e-58 224
WERAM-Aet-0058 EMT09500 Aegilops tauschii 44 2e-57 221
WERAM-Art-0028 AT1G73150.1 Arabidopsis thaliana 38 2e-55 213
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 44 1e-54 211
WERAM-Orb-0001 OBART01G07260.1 Oryza barthii 46 1e-54 211
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 45 2e-54 210
WERAM-Brr-0041 Bra008074.1-P Brassica rapa 35 3e-53 206
WERAM-Bro-0148 Bo8g067470.1 Brassica oleracea 35 5e-53 206
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 45 7e-53 205
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 41 6e-50 196
WERAM-Arl-0050 fgenesh2_kg.112__ 2__ AT5G65630.1 Arabidopsis lyrata 45 7e-41 165
WERAM-Sem-0092 EFJ05740 Selaginella moellendorffii 33 5e-39 159
WERAM-Paa-0051 ENSPANP00000003567.1 Papio anubis 31 4e-27 120
WERAM-Dan-0098 ENSDNOP00000010335.3 Dasypus novemcinctus 31 1e-25 115
Created Date 25-Jun-2016