WERAM Information

Tag Content
WERAM ID WERAM-Sot-0033
Ensembl Protein ID PGSC0003DMT400028638
Gene Name PGSC0003DMG400011022
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400011022 PGSC0003DMT400028638 PGSC0003DMT400028638
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.50e-11 44.6 185 234
Organism Solanum tuberosum
Domain Profile
  Me_Reader PHD
               PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpeg.kswyCpsCk 51 
                           t+C  C+ +++ +++++ Cd C++wfH+kCvk++  ++ eg k++ Cp C 
  PGSC0003DMT400028638 185 TLCGCCDGNYNADEFWIGCDICERWFHGKCVKITPARA-EGiKQYKCPACN 234
                           78**89666666777*******************4444.45689******6 PP
Protein Sequence
(Fasta)		MASISSSPRT VEEIFKDYSA RRAGILRALT NDVEEFSNTC DPEKENLCLY GHPNETWEVN 60
LPADEVPPEL PEPALGINFA RDGMNRIDWL SLVAVHSDCW LLAVAYFFGA RLNRNERKRL 120
HSLINDLPTV FEVIAERKPI QDKPSADNGS KSRGSIQRTS DVQAKNTAKL ADESCDEDEE 180
EHGETLCGCC DGNYNADEFW IGCDICERWF HGKCVKITPA RAEGIKQYKC PACNLKRHRP 240
Nucleotide Sequence
(Fasta)		CCACACGCCC TCAATTCAAT GTTGTTCTTC TTTTCTAGTT CAATAGGTTT ACAAAAATTG 60
AGATCAATTT TCCTCTTTTG TTGTTAGCGA TAATTTCAGT TTGATTTTAT TTATTTGGAG 120
GAATATGGCT TCAATTTCTT CTAGTCCGAG GACTGTAGAA GAGATCTTCA AAGATTACAG 180
TGCTCGCCGT GCTGGGATAC TTCGTGCTTT AACTAATGAT GTGGAAGAGT TTTCTAATAC 240
GTGTGATCCA GAAAAGGAAA ATTTGTGTCT GTATGGACAT CCGAATGAAA CATGGGAAGT 300
CAACCTTCCA GCTGACGAAG TTCCACCTGA ACTCCCAGAG CCAGCTCTTG GGATAAATTT 360
TGCAAGGGAT GGGATGAATC GTATAGATTG GCTTTCATTG GTTGCTGTGC ACAGTGATTG 420
TTGGTTGCTT GCTGTGGCCT ATTTTTTTGG AGCTCGTCTT AACAGAAATG AAAGGAAGCG 480
TCTGCACAGC TTGATCAACG ATTTGCCCAC TGTTTTTGAA GTCATAGCAG AAAGAAAGCC 540
CATACAAGAC AAGCCTAGTG CAGATAATGG GAGCAAATCC CGTGGTAGTA TACAGAGGAC 600
AAGTGACGTT CAGGCAAAAA ACACTGCAAA GCTGGCAGAT GAAAGTTGCG ACGAGGATGA 660
AGAAGAACAT GGTGAAACAC TATGCGGATG TTGTGATGGG AATTACAATG CTGATGAATT 720
TTGGATTGGT TGTGATATCT GCGAGAGATG GTTCCATGGT AAGTGCGTGA AGATAACACC 780
TGCTAGAGCT GAGGGTATAA AGCAGTATAA ATGCCCTGCA TGTAACTTGA AGCGGCACAG 840
ACCATAGTTG TCTCATGAAT TAGAGAGAGG GGTCATATGC TTTGGCAACT AACAAAATAG 900
ATAGTACAGC ATTATGTAAT GGGAATCCTA ATGGTAACGA CTTCGCCATG ACCCTTGGGA 960
AAGAACGAAA TTTGGCTTCT TCCCTTAATC CATTTTCGGA TATATATAGG AAGTTTGTTA 1020
AATTTTTCGT GATCTATTTT TATGGTTTGA GTTGGTTAAT AGACGGTTAT ACTATAGCCT 1080
TGTTAGCTTG TTGATTGCCA TTGATTTTAG ATTTCTTCAC CGAAATGGTG TAAACTGTAA 1140
AGTAGAAAGC AAAACATCAA GTTCAGGAAG TTTGACAACC CTTTTAGCTT GGCTTAGTTT 1200
GTTTCTAAAA TTGCCTATTA TTTTCACAAA GAGCTT 1237
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0130 Solyc10g085180.1.1 Solanum lycopersicum 94 3e-126 448
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 80 2e-98 355
WERAM-Glm-0018 GLYMA03G07750.1 Glycine max 77 4e-98 354
WERAM-Prp-0083 EMJ07006 Prunus persica 78 2e-96 348
WERAM-Thc-0059 EOY07191 Theobroma cacao 77 2e-96 348
WERAM-Pot-0074 POPTR_0006s10180.1 Populus trichocarpa 76 3e-95 345
WERAM-Met-0092 KEH28874 Medicago truncatula 76 4e-94 341
WERAM-Mua-0047 GSMUA_Achr2P18960_001 Musa acuminata 72 1e-91 333
WERAM-Amt-0010 ERN05231 Amborella trichopoda 72 2e-91 332
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 66 7e-89 323
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 73 8e-89 323
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 73 1e-88 323
WERAM-Sob-0001 Sb01g003420.1 Sorghum bicolor 66 2e-88 322
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 71 1e-87 319
WERAM-Brr-0171 Bra034860.1-P Brassica rapa 71 2e-87 319
WERAM-Sei-0039 Si010912m Setaria italica 65 3e-87 318
WERAM-Lep-0051 LPERR05G03920.1 Leersia perrieri 66 6e-87 317
WERAM-Ori-0059 BGIOSGA018756-PA Oryza indica 65 2e-86 315
WERAM-Org-0051 ORGLA05G0040800.1 Oryza glaberrima 65 2e-86 315
WERAM-Orm-0050 OMERI05G04360.1 Oryza meridionalis 65 3e-86 315
WERAM-Php-0009 PP1S117_107V6.1 Physcomitrella patens 60 1e-85 313
WERAM-Brd-0001 BRADI1G03900.1 Brachypodium distachyon 66 6e-84 307
WERAM-Orbr-0082 OB07G15980.1 Oryza brachyantha 70 1e-83 306
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 73 5e-83 304
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 73 5e-83 304
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 73 6e-83 304
WERAM-Orb-0051 OBART05G04390.1 Oryza barthii 59 1e-82 303
WERAM-Orgl-0050 OGLUM05G04310.1 Oryza glumaepatula 59 1e-82 303
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 63 4e-82 301
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 63 1e-81 300
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 71 1e-81 300
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 67 3e-79 291
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 67 3e-78 288
WERAM-Aet-0099 EMT23706 Aegilops tauschii 57 2e-76 282
WERAM-Tru-0043 TRIUR3_20050-P1 Triticum urartu 67 5e-66 248
Created Date 25-Jun-2016