WERAM Information

Tag Content
WERAM ID WERAM-Sot-0006
Ensembl Protein ID PGSC0003DMT400006365
Gene Name PGSC0003DMG400002485
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400002485 PGSC0003DMT400006365 PGSC0003DMT400006365
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 4.20e-12 47.5 216 266
Organism Solanum tuberosum
Domain Profile
  Me_Reader PHD
               PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                           t+C vC+ ++++++++++Cd+C++wfH++Cvk++  ++++ k++ Cp C  
  PGSC0003DMT400006365 216 TLCGVCEGKYAKDEFWICCDHCETWFHGQCVKITAATAEYIKQYKCPPCSS 266
                           78****999999999*******************777776689******75 PP
Protein Sequence
(Fasta)		MEFGAKGQKK PKPIDVFKNV KGRYTGLIKA LTTDVEELYK QCDPEKENLS LYGLPNEQWE 60
VNLPAEDSPP GLPEPVLGIN FAREGMEQKE WLSFVAYHSD SWLLAIAFYV GARFGFGKAE 120
RKKLFDMIND LPSIHEVVIG VPETQQKEKP TVPNQSKNKS KPNASKRASE PQGMLTKLQQ 180
KYEDDDDEED DEEEEDKEDE EEWGIEMDVE EEGGETLCGV CEGKYAKDEF WICCDHCETW 240
FHGQCVKITA ATAEYIKQYK CPPCSSKRSR SHFTEY 276
Nucleotide Sequence
(Fasta)		GGAGAAAATA GAATAAGTAG TATAGTAGTA TCAGAATTGG TAATCTTATT ATCAAATTCT 60
CTCAGACTCA GAAACCTTGT ACGAAGTCAA AACTGCTTTT GACTTTCTTC TTCTTCTCTC 120
ATATGATTTT TGCCGGTGCT GTTTGTAGCT GCAAAAGAGG TATTTTTTGA AAAAAAAGAG 180
ATGGAATTTG GAGCAAAAGG ACAGAAGAAG CCTAAACCCA TTGATGTGTT TAAGAATGTC 240
AAGGGCAGAT ATACTGGTTT AATTAAAGCT CTCACAACAG ATGTGGAAGA ACTTTATAAG 300
CAGTGTGATC CTGAAAAGGA GAACTTAAGC TTGTATGGAC TCCCAAATGA GCAATGGGAG 360
GTCAATCTAC CTGCTGAAGA TTCACCACCA GGCCTTCCAG AGCCTGTTCT TGGTATCAAC 420
TTTGCTAGAG AGGGGATGGA ACAAAAGGAG TGGCTTTCTT TTGTTGCCTA TCACAGTGAT 480
TCTTGGTTGC TTGCTATTGC CTTCTACGTT GGTGCTAGAT TTGGATTTGG TAAAGCCGAG 540
AGGAAGAAGC TCTTTGACAT GATAAATGAT TTACCTTCAA TACATGAAGT AGTGATTGGT 600
GTGCCAGAGA CGCAACAAAA AGAAAAACCT ACAGTCCCTA ATCAAAGTAA AAACAAATCC 660
AAGCCAAACG CCAGTAAGAG GGCATCGGAG CCTCAGGGTA TGCTTACAAA GTTGCAGCAA 720
AAATATGAAG ATGATGATGA TGAAGAAGAT GATGAAGAAG AAGAAGATAA AGAAGACGAG 780
GAGGAATGGG GTATTGAGAT GGATGTTGAA GAGGAGGGAG GTGAGACACT GTGCGGCGTA 840
TGTGAGGGGA AGTATGCAAA GGATGAATTT TGGATATGTT GCGATCATTG TGAAACATGG 900
TTCCACGGCC AGTGTGTGAA GATCACCGCT GCCACAGCTG AGTACATTAA GCAATACAAG 960
TGCCCGCCTT GCAGCAGCAA AAGATCCCGG TCTCACTTTA CAGAATACTG ATCAACAAGA 1020
GTTCTCTTGC TGCTAAGTGC AGCTAACTGT TTTAGTTAGG CTATTCATGA TGTTTAGCAA 1080
AAATGTCTGA AGTTCAGTCT CAGCCATATG AAACTTCAAA CGTTTTATCT CAAGTTAGAC 1140
TTTGTTAAGA CTAACTTCAG TCGTTGCATG TCTGAAGTTG TCCCGAAGTA AGTAGATGTG 1200
CCAAAATTTT AGGACATAAC TTAAACAGTG ACACCAAAAT CAGGTCTATG TGTACTCCTC 1260
TACCCTATCC CCACCCAATT TTAAAAGTAT TTATTTTTTA AACCACTTAG CTCGCTATCA 1320
TTAGCTGTAT TTTTT 1336
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0059 Solyc03g121930.2.1 Solanum lycopersicum 90 8e-132 466
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 61 3e-79 291
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 55 4e-78 288
WERAM-Glm-0185 GLYMA15G03160.1 Glycine max 61 3e-76 281
WERAM-Prp-0082 EMJ27202 Prunus persica 61 6e-76 281
WERAM-Met-0172 KEH18446 Medicago truncatula 60 2e-75 279
WERAM-Amt-0032 ERN11177 Amborella trichopoda 60 1e-74 276
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 55 4e-74 275
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 61 8e-74 274
WERAM-Thc-0077 EOY27191 Theobroma cacao 60 1e-72 270
WERAM-Orbr-0055 OB04G21120.1 Oryza brachyantha 53 1e-72 270
WERAM-Orm-0047 OMERI04G12540.2 Oryza meridionalis 53 1e-72 270
WERAM-Orni-0040 ONIVA04G12140.1 Oryza nivara 53 1e-72 270
WERAM-Ors-0042 OS04T0444900-01 Oryza sativa 53 2e-72 270
WERAM-Orgl-0044 OGLUM04G13710.1 Oryza glumaepatula 53 2e-72 270
WERAM-Orb-0044 OBART04G13930.1 Oryza barthii 53 2e-72 270
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 57 2e-72 269
WERAM-Zem-0026 GRMZM2G038066_P01 Zea mays 55 3e-72 269
WERAM-Orr-0044 ORUFI04G15210.1 Oryza rufipogon 53 5e-72 268
WERAM-Orp-0045 OPUNC04G11800.1 Oryza punctata 53 7e-72 267
WERAM-Ori-0053 BGIOSGA016480-PA Oryza indica 53 1e-71 266
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 56 5e-71 265
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 53 3e-70 262
WERAM-Sei-0118 Si030765m Setaria italica 59 5e-70 261
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 57 6e-70 261
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 54 3e-69 259
WERAM-Php-0009 PP1S117_107V6.1 Physcomitrella patens 51 3e-68 255
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 56 5e-67 251
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 56 7e-67 251
WERAM-Brd-0058 BRADI2G57280.2 Brachypodium distachyon 49 2e-65 246
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 57 3e-65 245
WERAM-Aet-0106 EMT19247 Aegilops tauschii 52 8e-64 241
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 46 2e-63 239
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 52 9e-60 227
Created Date 25-Jun-2016