WERAM Information

Tag Content
WERAM ID WERAM-Sol-0059
Ensembl Protein ID Solyc03g121930.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc03g121930.2 Solyc03g121930.2.1 Solyc03g121930.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.00e-12 47.8 216 266
Organism Solanum lycopersicum
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                         t+C +C+ ++++++++++Cd+C++wfH++Cvk++  ++++ k++ Cp C  
  Solyc03g121930.2.1 216 TLCGICEGKYAKDEFWICCDHCETWFHGQCVKITAATAEYMKQYKCPPCSS 266
                         78****999999999*******************888887789******75 PP
Protein Sequence
(Fasta)		MEFGAKGQKK AKPIDVFKNV KGRYTGLIKA LTTDVDEFYK QCDPEKENLS LYGLPNERWE 60
VNLPAEDSPP GLPEPVLGIN FAREGMEQKE WLSFVAYHSD SWLLAIAFYA GARCGFGKAD 120
RKKLFDMIND LPSIHEVVIG VPKTQQKEKP TVANQSKNKS KPNATKRAAE PQDMFTKMQQ 180
KYEEDDDDDD DDDEAGEEDE DEWGIEMDVE EEEGETLCGI CEGKYAKDEF WICCDHCETW 240
FHGQCVKITA ATAEYMKQYK CPPCSSKRAR THFTEY 276
Nucleotide Sequence
(Fasta)		ATAGCAGTAT CAGAATTGGT AAGCGTATTA TCAAATTCTC TCAAACTTTC TTCTTCTTCT 60
CTCATATGAT TTTTGACGAC GCTGCTTGTA ACCGCAGAAG TGGTGTTTAA TTATTTTTTT 120
TAAAAAAAGA TGGAATTTGG AGCTAAAGGA CAGAAGAAGG CAAAACCCAT TGATGTCTTC 180
AAGAATGTCA AGGGCAGATA TACTGGTCTA ATTAAAGCTC TCACAACAGA TGTGGATGAA 240
TTTTATAAGC AGTGTGATCC TGAAAAGGAG AACTTAAGCT TGTATGGACT CCCAAATGAG 300
CGATGGGAGG TCAATCTGCC TGCTGAAGAT TCACCACCAG GCCTTCCAGA GCCTGTTCTT 360
GGTATCAACT TTGCTAGAGA GGGAATGGAA CAAAAGGAGT GGCTTTCTTT TGTTGCTTAT 420
CACAGTGATT CTTGGTTGCT TGCTATTGCC TTCTACGCTG GTGCTAGATG TGGATTTGGT 480
AAAGCCGACA GGAAGAAGCT CTTTGACATG ATAAATGATT TACCTTCAAT ACATGAAGTA 540
GTGATTGGTG TTCCAAAGAC GCAACAAAAA GAAAAACCTA CAGTCGCTAA TCAAAGTAAA 600
AACAAATCCA AGCCAAACGC CACTAAGAGG GCAGCGGAGC CTCAGGATAT GTTTACGAAG 660
ATGCAGCAAA AATATGAAGA AGATGATGAT GATGATGATG ACGACGACGA AGCAGGAGAA 720
GAAGATGAGG ATGAATGGGG TATTGAGATG GATGTTGAAG AGGAGGAAGG TGAGACACTG 780
TGCGGCATAT GTGAGGGGAA GTATGCGAAG GATGAATTTT GGATATGTTG CGATCATTGT 840
GAAACATGGT TCCACGGCCA GTGTGTTAAG ATCACCGCTG CCACAGCTGA GTATATGAAG 900
CAATACAAGT GCCCGCCTTG CAGCAGCAAA AGAGCCCGGA CTCACTTTAC AGAATACTGA 960
TCAACAACAG TTCTCTTGCT GCTAACTGTC TATTCATGAT GTTTTGCTAA AATGTCTGAA 1020
GTATGAAACT GAAGTTAGAC TCTGTTAAGA CTAACTTCAG TCGTTACGTC TAAAGTTGTC 1080
CCGAATTGAG TAGATGTACC AAAATTTTAT AAATTTAGGA CATTACTTAA ACAGTGACAC 1140
CAAAATTGTG TCTGTGTGTA CTCCCCAACC CCACCCAATT TTAAACGTAT TTATTTTTTA 1200
1201
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sot-0006 PGSC0003DMT400006365 Solanum tuberosum 90 6e-132 467
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 62 1e-77 286
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 55 3e-76 281
WERAM-Amt-0032 ERN11177 Amborella trichopoda 61 4e-74 275
WERAM-Prp-0082 EMJ27202 Prunus persica 61 1e-73 273
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 57 3e-73 272
WERAM-Glm-0185 GLYMA15G03160.1 Glycine max 59 5e-73 271
WERAM-Met-0172 KEH18446 Medicago truncatula 61 2e-72 269
WERAM-Viv-0061 VIT_09s0002g01600.t01 Vitis vinifera 60 1e-71 266
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 55 2e-71 266
WERAM-Thc-0077 EOY27191 Theobroma cacao 62 2e-71 266
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 56 4e-70 261
WERAM-Orm-0047 OMERI04G12540.2 Oryza meridionalis 53 6e-70 261
WERAM-Orbr-0055 OB04G21120.1 Oryza brachyantha 52 6e-70 261
WERAM-Orni-0040 ONIVA04G12140.1 Oryza nivara 53 7e-70 261
WERAM-Ors-0042 OS04T0444900-01 Oryza sativa 53 7e-70 261
WERAM-Orgl-0044 OGLUM04G13710.1 Oryza glumaepatula 53 7e-70 261
WERAM-Orb-0044 OBART04G13930.1 Oryza barthii 53 7e-70 261
WERAM-Zem-0026 GRMZM2G038066_P01 Zea mays 54 1e-69 260
WERAM-Orr-0044 ORUFI04G15210.1 Oryza rufipogon 52 2e-69 259
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 57 3e-69 259
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 57 3e-69 259
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 54 3e-69 259
WERAM-Orp-0045 OPUNC04G11800.1 Oryza punctata 52 3e-69 258
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 54 5e-69 258
WERAM-Sei-0118 Si030765m Setaria italica 57 7e-68 254
WERAM-Php-0009 PP1S117_107V6.1 Physcomitrella patens 51 8e-67 250
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 53 1e-65 247
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 56 3e-65 245
WERAM-Brd-0116 BRADI4G40230.1 Brachypodium distachyon 54 6e-65 244
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 58 2e-64 243
WERAM-Aet-0106 EMT19247 Aegilops tauschii 53 3e-64 242
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 47 2e-63 239
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 51 1e-58 223
Created Date 25-Jun-2016