WERAM Information

Tag Content
WERAM ID WERAM-Orgl-0046
Ensembl Protein ID OGLUM04G25680.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OGLUM04G25680 OGLUM04G25680.1 OGLUM04G25680.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 4.60e-19 69.4 133 202
Organism Oryza glumaepatula
Domain Profile
  Ac_Reader Bromodomain
        BROMO.txt   3 hevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                       + s  F+ pv+ + l ++dY+ +ik PmdL t++++l +g+Yss ++f++Dvrl f+Na  yn+++++v
  OGLUM04G25680.1 133 DKRSIWFNAPVEVDrLGLHDYHAVIKCPMDLGTVRANLAAGRYSSHDDFAADVRLTFSNALRYNPAGHEV 202
                      56778899****999***************************************************9987 PP
Protein Sequence
(Fasta)		MASALLAGRG GANHHHHHQW GETRAPLAPV APNSDPNHPL QQRANGSATR PPPSSYVALR 60
PGAMAHREAR ALRDRLAGEL GQVRALIARI DTWQQGQVKR HGSPRRDLPT PPAKLRAAMR 120
KRCDQILAKL RKDKRSIWFN APVEVDRLGL HDYHAVIKCP MDLGTVRANL AAGRYSSHDD 180
FAADVRLTFS NALRYNPAGH EVHTFAGDLL ASFEKMYKAS VSWFEQELKL LEPPMPVPPP 240
ELPPATAPAQ VKPRAGNVKM RKPKAREPNK REMTLEEKNL LRIGLESLPE QKMHNVLQIV 300
RKRNGNPELV GGEIELDIDE MDVETQWELD RFVNNFKKAL NKSRRAAIVN GENADVIDAS 360
VANDSDMLVN GSTATMVDNG DVTMAIESKD PDKITTQAEQ LDEYVDIGDE MPTATYQSVE 420
IEKDTEVASS GSSSSSDSGS SKDSVSESGN AHSLV 455
Nucleotide Sequence
(Fasta)		ATGGCCTCCG CCCTGCTCGC CGGCCGGGGC GGGGCTAACC ACCACCACCA CCACCAGTGG 60
GGGGAGACCC GTGCCCCGCT CGCGCCCGTG GCCCCCAATT CCGATCCCAA CCACCCTCTC 120
CAGCAGCGCG CCAACGGCTC GGCCACGAGG CCGCCGCCGT CAAGCTACGT GGCGCTGCGG 180
CCGGGGGCGA TGGCTCACCG CGAGGCCCGC GCGCTGCGGG ACCGCCTCGC CGGCGAGCTG 240
GGCCAGGTCC GCGCCCTCAT CGCCCGGATC GACACGTGGC AGCAGGGTCA GGTGAAGCGC 300
CATGGCTCGC CTCGCCGGGA CCTCCCCACG CCGCCGGCGA AGCTCAGGGC GGCGATGCGG 360
AAGCGGTGCG ACCAGATCCT GGCGAAGCTG CGGAAGGACA AGCGGAGCAT CTGGTTCAAT 420
GCCCCCGTCG AGGTCGACCG CCTGGGGCTC CACGACTACC ACGCAGTCAT CAAATGCCCC 480
ATGGATCTCG GCACGGTGAG GGCGAACCTC GCCGCCGGAA GGTACTCCTC GCACGACGAC 540
TTCGCCGCCG ACGTCCGGCT CACGTTCAGC AACGCGCTGC GGTACAACCC TGCTGGACAC 600
GAGGTCCACA CCTTCGCCGG CGACCTCCTG GCGTCCTTTG AGAAGATGTA CAAAGCGTCG 660
GTGTCTTGGT TCGAGCAGGA ACTCAAGCTC CTTGAGCCGC CGATGCCAGT GCCGCCACCG 720
GAATTGCCGC CGGCGACTGC TCCGGCGCAG GTGAAACCAA GGGCAGGGAA TGTGAAAATG 780
CGGAAGCCGA AGGCAAGGGA GCCGAACAAG AGGGAGATGA CCCTGGAGGA GAAGAACTTG 840
TTGAGGATTG GGTTGGAGAG CTTGCCGGAG CAGAAGATGC ATAATGTGCT GCAGATTGTG 900
CGGAAGAGGA ATGGCAATCC TGAGCTGGTT GGGGGTGAGA TTGAGCTGGA TATTGATGAG 960
ATGGATGTCG AGACACAGTG GGAGCTTGAT CGATTCGTCA ACAACTTCAA GAAGGCGCTC 1020
AACAAGAGTC GACGGGCTGC CATTGTTAAT GGTGAAAATG CCGATGTCAT TGATGCTTCC 1080
GTGGCTAATG ATAGTGATAT GCTGGTGAAT GGCAGTACCG CTACGATGGT GGACAACGGT 1140
GATGTGACGA TGGCAATAGA GAGCAAGGAT CCTGACAAGA TCACTACACA GGCCGAGCAG 1200
TTGGATGAGT ATGTAGATAT CGGGGATGAA ATGCCAACAG CAACTTACCA ATCAGTGGAG 1260
ATTGAGAAGG ATACTGAGGT CGCGAGCAGT GGGTCCTCAT CATCCAGTGA TTCAGGGAGC 1320
TCAAAGGACA GTGTCTCAGA ATCTGGCAAT GCCCATTCTC TGGTGTAA 1369
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Org-0047 ORGLA04G0228000.1 Oryza glaberrima 98 0.0 808
WERAM-Orb-0046 OBART04G26330.1 Oryza barthii 98 0.0 808
WERAM-Orni-0043 ONIVA04G24780.1 Oryza nivara 98 0.0 806
WERAM-Ori-0047 BGIOSGA014321-PA Oryza indica 98 0.0 803
WERAM-Ors-0045 OS04T0623100-01 Oryza sativa 98 0.0 801
WERAM-Orm-0048 OMERI04G21370.1 Oryza meridionalis 97 0.0 788
WERAM-Orr-0047 ORUFI04G27450.1 Oryza rufipogon 98 0.0 740
WERAM-Lep-0049 LPERR04G21400.1 Leersia perrieri 81 0.0 646
WERAM-Sei-0075 Si020659m Setaria italica 72 3e-157 552
WERAM-Orbr-0057 OB04G32690.1 Oryza brachyantha 89 8e-154 540
WERAM-Zem-0129 GRMZM2G396846_P01 Zea mays 67 6e-151 531
WERAM-Sob-0092 Sb06g028960.1 Sorghum bicolor 67 9e-150 527
WERAM-Brd-0129 BRADI5G22200.1 Brachypodium distachyon 63 4e-142 502
WERAM-Aet-0027 EMT12940 Aegilops tauschii 69 2e-114 410
WERAM-Hov-0040 MLOC_39251.1 Hordeum vulgare 69 1e-112 404
WERAM-Orp-0086 OPUNC08G05270.1 Oryza punctata 53 6e-110 395
WERAM-Orl-0096 KN540796.1_FGP002 Oryza longistaminata 59 1e-90 330
WERAM-Mua-0050 GSMUA_Achr3P00480_001 Musa acuminata 41 6e-71 265
WERAM-Glm-0169 GLYMA13G32750.2 Glycine max 37 8e-55 212
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 38 8e-52 202
WERAM-Amt-0025 ERN13953 Amborella trichopoda 42 4e-47 186
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 40 4e-46 182
WERAM-Prp-0041 EMJ12560 Prunus persica 41 1e-44 177
WERAM-Pot-0170 POPTR_0019s12050.1 Populus trichocarpa 40 2e-44 177
WERAM-Met-0054 KEH39252 Medicago truncatula 40 3e-44 176
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 37 1e-40 165
WERAM-Brr-0041 Bra008074.1-P Brassica rapa 34 2e-40 164
WERAM-Bro-0090 Bo5g007360.1 Brassica oleracea 39 6e-40 162
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 38 2e-39 160
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 39 3e-39 160
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 39 4e-39 160
WERAM-Sot-0105 PGSC0003DMT400032373 Solanum tuberosum 36 2e-36 151
WERAM-Thc-0024 EOX98601 Theobroma cacao 48 7e-34 142
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 34 2e-33 141
WERAM-Sol-0021 Solyc01g106280.2.1 Solanum lycopersicum 42 7e-31 132
WERAM-Tar-0033 ENSTRUP00000007860.1 Takifugu rubripes 43 5e-20 96.7
Created Date 25-Jun-2016