WERAM Information

Tag Content
WERAM ID WERAM-Sob-0092
Ensembl Protein ID Sb06g028960.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb06g028960 Sb06g028960.1 Sb06g028960.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 1.10e-18 67.8 130 198
Organism Sorghum bicolor
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   4 evsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                    + s  F+ pv+ + l ++dY+++ik+PmdL t+ke l +g+Y s ++f++Dvrl f+Na  yn+ +++v
  Sb06g028960.1 130 KRSVWFNAPVEVErLGLHDYHTVIKRPMDLGTVKEGLAAGRYASHDDFAADVRLTFTNALRYNPVGHEV 198
                    667789*********************************************************998887 PP
Protein Sequence
(Fasta)		MASALLAGRG GAHHHSSWET RAPLAPIPPN PSPSQPHPRA DGSKSKSKPR AAAAVGYVTF 60
RPSSLGQREA RALRDRLAGE LGQVRALLSR IDTWQQQGPP PLPPPPAKQQ LRGTMRKRCG 120
QILTRLRKDK RSVWFNAPVE VERLGLHDYH TVIKRPMDLG TVKEGLAAGR YASHDDFAAD 180
VRLTFTNALR YNPVGHEVHT FAGALLAYFE RMYKEALANF EEECRSLEPP PRPVAVELPP 240
PPAAEPVEAK VKPRAGNVRM RKPKAREPNK REMSLEEKNM LRIGLESLPE EKMHNVLQIV 300
RKRNNNPEML GDEIELDIDE MDVETQWELD RFVTNFNKAL KKSQRAAMMN GGAADVTSAA 360
VAEDDTAPVG DVPALVDNDD AESEKPVKST AMAEQVDEYV DIGDEMPTAT YQSMEIEKDA 420
EGVTGSGGSG SGSSSSSGSE SRSSGDSASG AGNAHSLA 458
Nucleotide Sequence
(Fasta)		ATGGCCTCCG CCCTGCTGGC CGGACGGGGC GGGGCGCACC ACCACAGCTC CTGGGAGACG 60
CGCGCCCCGC TCGCGCCCAT CCCGCCCAAC CCTAGCCCCA GCCAGCCCCA CCCGCGCGCC 120
GACGGGTCCA AGTCCAAGTC CAAGCCGCGG GCGGCGGCGG CGGTCGGCTA CGTGACGTTC 180
CGCCCGTCCT CCCTCGGCCA GCGCGAGGCC CGCGCGCTCC GGGACCGCCT CGCGGGGGAG 240
CTGGGCCAGG TCCGCGCCCT CCTCTCCCGC ATCGACACCT GGCAGCAGCA GGGCCCGCCA 300
CCGCTGCCTC CGCCGCCCGC GAAGCAGCAG CTCCGCGGGA CGATGCGGAA GCGGTGCGGC 360
CAGATCCTCA CCAGGCTGCG CAAGGACAAG CGGAGCGTGT GGTTCAACGC GCCCGTCGAG 420
GTGGAGCGCC TCGGCCTCCA CGACTACCAC ACCGTCATCA AGCGCCCCAT GGATCTCGGC 480
ACCGTCAAGG AGGGCCTCGC CGCCGGGAGG TACGCCTCGC ACGACGACTT CGCGGCCGAC 540
GTCCGCCTCA CCTTCACCAA CGCGCTGCGG TACAACCCCG TCGGCCACGA GGTCCACACG 600
TTCGCTGGCG CCCTCCTCGC CTACTTCGAG AGGATGTACA AGGAGGCGCT CGCTAATTTC 660
GAGGAAGAGT GCAGAAGCCT TGAGCCCCCG CCAAGGCCAG TGGCGGTGGA GTTGCCACCT 720
CCACCGGCAG CTGAGCCTGT TGAGGCGAAG GTTAAGCCGA GAGCTGGGAA TGTGAGGATG 780
CGGAAGCCCA AGGCGAGGGA GCCGAACAAG AGGGAGATGA GCCTGGAGGA GAAGAACATG 840
CTCAGGATTG GGCTGGAGAG TTTGCCTGAA GAGAAGATGC ATAATGTGCT TCAGATTGTG 900
AGGAAGAGGA ACAACAACCC GGAGATGCTT GGGGATGAGA TCGAGCTTGA TATTGATGAG 960
ATGGATGTTG AGACACAGTG GGAGCTTGAT CGTTTCGTAA CTAACTTCAA CAAGGCGCTC 1020
AAGAAGTCTC AGCGTGCTGC GATGATGAAT GGTGGCGCTG CTGATGTAAC CAGTGCTGCT 1080
GTGGCTGAGG ATGACACTGC ACCTGTGGGC GATGTGCCTG CATTGGTTGA CAATGATGAT 1140
GCGGAGAGTG AGAAACCTGT GAAGAGCACT GCTATGGCTG AGCAGGTGGA TGAATATGTT 1200
GATATTGGGG ATGAGATGCC TACAGCCACT TACCAATCCA TGGAGATCGA GAAGGATGCT 1260
GAAGGTGTGA CTGGCTCTGG TGGTTCTGGC AGTGGCTCTT CATCCTCCAG TGGTTCTGAG 1320
TCGAGGAGCT CAGGGGACAG TGCCTCAGGA GCTGGCAATG CTCATTCTTT GGCTTAG 1378
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0129 GRMZM2G396846_P01 Zea mays 88 0.0 634
WERAM-Sei-0075 Si020659m Setaria italica 75 2e-166 582
WERAM-Orgl-0046 OGLUM04G25680.1 Oryza glumaepatula 66 2e-143 506
WERAM-Org-0047 ORGLA04G0228000.1 Oryza glaberrima 65 1e-142 503
WERAM-Orb-0046 OBART04G26330.1 Oryza barthii 65 1e-142 503
WERAM-Orm-0048 OMERI04G21370.1 Oryza meridionalis 65 2e-141 499
WERAM-Orni-0043 ONIVA04G24780.1 Oryza nivara 66 1e-140 497
WERAM-Ori-0047 BGIOSGA014321-PA Oryza indica 65 4e-139 492
WERAM-Ors-0045 OS04T0623100-01 Oryza sativa 65 8e-139 491
WERAM-Lep-0049 LPERR04G21400.1 Leersia perrieri 63 1e-138 490
WERAM-Brd-0129 BRADI5G22200.1 Brachypodium distachyon 61 3e-127 452
WERAM-Orr-0047 ORUFI04G27450.1 Oryza rufipogon 63 2e-123 439
WERAM-Orbr-0057 OB04G32690.1 Oryza brachyantha 70 6e-119 425
WERAM-Hov-0040 MLOC_39251.1 Hordeum vulgare 71 1e-116 417
WERAM-Aet-0027 EMT12940 Aegilops tauschii 71 2e-115 413
WERAM-Orp-0086 OPUNC08G05270.1 Oryza punctata 58 8e-110 394
WERAM-Orl-0096 KN540796.1_FGP002 Oryza longistaminata 61 8e-95 345
WERAM-Mua-0034 GSMUA_Achr1P15650_001 Musa acuminata 40 4e-73 272
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 38 1e-52 204
WERAM-Amt-0025 ERN13953 Amborella trichopoda 38 2e-47 187
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 39 2e-46 184
WERAM-Thc-0011 EOX94205 Theobroma cacao 42 3e-46 183
WERAM-Prp-0041 EMJ12560 Prunus persica 38 1e-45 181
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 40 2e-45 180
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 41 2e-45 180
WERAM-Met-0054 KEH39252 Medicago truncatula 41 4e-45 179
WERAM-Pot-0170 POPTR_0019s12050.1 Populus trichocarpa 38 7e-45 179
WERAM-Bro-0148 Bo8g067470.1 Brassica oleracea 36 2e-44 177
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 41 3e-44 176
WERAM-Brr-0160 Bra032431.1-P Brassica rapa 38 2e-41 167
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 41 7e-41 165
WERAM-Arl-0033 fgenesh1_pm.C_scaffold_2001298 Arabidopsis lyrata 35 3e-39 160
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 34 9e-38 155
WERAM-Sol-0051 Solyc03g111090.2.1 Solanum lycopersicum 32 1e-29 128
WERAM-Art-0078 AT3G27260.1 Arabidopsis thaliana 39 5e-29 126
Created Date 25-Jun-2016