WERAM Information

Tag Content
WERAM ID WERAM-Orgl-0042
Ensembl Protein ID OGLUM03G38760.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OGLUM03G38760 OGLUM03G38760.1 OGLUM03G38760.1
OGLUM03G38760 OGLUM03G38760.2 OGLUM03G38760.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.00e-11 46 187 237
Organism Oryza glumaepatula
Domain Profile
  Me_Reader PHD
          PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                      t+C +Cg  ++ +++++ Cd C++wfH+kCv ++  +++  k++ Cp C  
  OGLUM03G38760.1 187 TFCGTCGGLYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDCSS 237
                      89****888888889*******************555554479******75 PP
Protein Sequence
(Fasta)		MAPAAQVASN PRTVEDIFKD YSARRGALVR ALTSDVDEFF GLCDPDKENL CLYGLANGSW 60
EVALPAEEVP PELPEPALGI NFARDGMNRR DWLSLVAVHS DSWLVSVAFF FAARLNGNER 120
KRLFNMINDL PTVYEALVDR KHVRDRSGVD SSGKSKHSTK RTGEGQVKRS RVVAEEYDDD 180
DEEHNETFCG TCGGLYNANE FWIGCDICER WFHGKCVRIT PAKAEHIKHY KCPDCSSSSS 240
KKTRL 245
Nucleotide Sequence
(Fasta)		ATGGCCCCCG CGGCGCAGGT GGCGTCGAAC CCGCGGACGG TGGAGGACAT CTTCAAGGAT 60
TACTCGGCGC GGCGCGGCGC GCTCGTCCGC GCGCTCACCT CAGATGTGGA CGAGTTCTTC 120
GGGCTCTGCG ACCCAGATAA GGAGAATTTG TGCCTGTACG GCCTCGCCAA CGGGAGCTGG 180
GAGGTGGCGC TGCCGGCGGA GGAGGTGCCG CCGGAGCTGC CCGAGCCGGC GCTCGGCATC 240
AACTTCGCCC GCGACGGGAT GAACCGCCGG GACTGGCTCT CCCTCGTCGC CGTCCACTCC 300
GACTCGTGGC TCGTCTCCGT CGCCTTCTTC TTCGCCGCGC GGCTCAACGG AAACGAACGG 360
AAGCGGCTCT TCAACATGAT CAATGATCTA CCTACTGTAT ATGAAGCATT GGTTGACAGG 420
AAGCACGTCA GGGATAGGTC TGGTGTCGAT AGCAGCGGAA AATCCAAACA TTCAACAAAG 480
AGAACAGGCG AAGGGCAGGT AAAGCGCTCC AGGGTTGTCG CAGAGGAGTA CGACGACGAC 540
GACGAAGAAC ACAACGAGAC ATTCTGCGGA ACTTGCGGTG GCCTCTACAA CGCGAACGAG 600
TTCTGGATCG GGTGCGACAT CTGTGAGCGG TGGTTCCACG GCAAATGCGT CAGGATAACC 660
CCGGCTAAGG CGGAGCACAT CAAGCACTAC AAGTGCCCTG ACTGCAGCAG CAGCTCCTCC 720
AAGAAAACCA GGCTATAG 739
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orr-0041 ORUFI03G40590.1 Oryza rufipogon 100 3e-121 431
WERAM-Orni-0038 ONIVA03G40570.1 Oryza nivara 100 3e-121 431
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 100 3e-121 431
WERAM-Ori-0031 BGIOSGA009559-PA Oryza indica 100 3e-121 431
WERAM-Ors-0037 OS03T0818300-01 Oryza sativa 100 4e-121 431
WERAM-Org-0041 ORGLA03G0356800.1 Oryza glaberrima 100 4e-121 431
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 98 5e-119 424
WERAM-Orp-0040 OPUNC03G36010.1 Oryza punctata 93 7e-115 410
WERAM-Orm-0044 OMERI03G35810.1 Oryza meridionalis 84 1e-114 409
WERAM-Lep-0044 LPERR03G33070.1 Leersia perrieri 94 4e-113 404
WERAM-Orbr-0050 OB03G45850.1 Oryza brachyantha 94 4e-111 397
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 78 2e-97 352
WERAM-Sei-0134 Si037171m Setaria italica 76 9e-96 347
WERAM-Sob-0001 Sb01g003420.1 Sorghum bicolor 76 1e-95 346
WERAM-Brd-0001 BRADI1G03900.1 Brachypodium distachyon 76 3e-89 325
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 73 2e-87 319
WERAM-Amt-0010 ERN05231 Amborella trichopoda 72 4e-86 314
WERAM-Mua-0013 GSMUA_Achr10P23040_001 Musa acuminata 73 6e-86 314
WERAM-Thc-0059 EOY07191 Theobroma cacao 73 6e-86 314
WERAM-Prp-0083 EMJ07006 Prunus persica 73 7e-86 313
WERAM-Sol-0125 Solyc10g076690.1.1 Solanum lycopersicum 70 2e-85 312
WERAM-Sot-0057 PGSC0003DMT400049364 Solanum tuberosum 70 7e-85 310
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 71 9e-84 306
WERAM-Pot-0155 POPTR_0016s12420.1 Populus trichocarpa 70 1e-83 306
WERAM-Met-0092 KEH28874 Medicago truncatula 72 6e-83 304
WERAM-Aet-0107 EMT22745 Aegilops tauschii 76 6e-78 287
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 69 7e-77 283
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 69 8e-77 283
WERAM-Tru-0043 TRIUR3_20050-P1 Triticum urartu 80 1e-76 283
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 65 1e-75 280
WERAM-Brr-0171 Bra034860.1-P Brassica rapa 64 2e-75 279
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 65 3e-74 275
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 65 3e-74 275
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 60 8e-73 270
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 62 1e-71 266
Created Date 25-Jun-2016