WERAM Information

Tag Content
WERAM ID WERAM-Orgl-0013
Ensembl Protein ID OGLUM01G45450.3
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OGLUM01G45450 OGLUM01G45450.3 OGLUM01G45450.3
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 2.00e-13 73
Organism Oryza glumaepatula
Domain Profile
  HDAC HD2
Query: 3   VDFWGVVIEPCNKEIFCPE-DTLYHLTSVALDEAYGLKDSNVKVFVEVNDEKFAIGTLSS 61
           ++FWGV + P N     PE D+L H++  +LD      +S V + V V   K  IGTLS 
Sbjct: 1   MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGES-VVLSVTVGGAKLVIGTLSQ 59
Query: 62  KRHPHIKVDFCFKKNFQLFHTSLISKVAFCGYQVKNLGK--FTDSEGDESNEEVP 114
            + P I  D  F K F+L H+   + V F GY+  N+ +  FT S+ ++  E VP
Sbjct: 60  DKFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFTSSDDEDVPEAVP 114
Protein Sequence
(Fasta)		MDVDFWGVVI EPCNKEIFCP EDTLYHLTSV ALDEAYGLKD SNVKVFVEVN DEKFAIGTLS 60
SKRHPHIKVD FCFKKNFQLF HTSLISKVAF CGYQVKNLGK FTDSEGDESN EEVPPGIRLY 120
PKSDDNMIKE AQKSKLPAKS AAVASAMQKA FVKEIEHYEK SKADDDNSER YSDSSVIGES 180
TGDEDSSDDA DDEGESSDEE ETPAKENTKE ENEPVVTPLK TAKLEVPIMT KLGLILAREA 240
KRTPIKNDTP KRSAGYVCNS CKK 263
Nucleotide Sequence
(Fasta)		ATGGACGTCG ATTTTTGGGG AGTGGTAATT GAGCCGTGTA ATAAGGAGAT CTTTTGTCCT 60
GAGGATACCC TGTATCATCT AACATCGGTA GCCCTTGATG AGGCTTACGG GCTAAAAGAC 120
TCCAACGTGA AAGTATTTGT CGAAGTTAAT GATGAGAAGT TTGCGATTGG GACGCTTTCC 180
TCCAAAAGGC ATCCGCATAT CAAGGTCGAC TTCTGTTTCA AGAAGAACTT TCAACTATTC 240
CACACCTCAC TAATCAGCAA AGTTGCCTTT TGTGGCTATC AAGTAAAGAA TTTGGGAAAA 300
TTCACTGATT CTGAAGGTGA TGAATCTAAT GAGGAGGTTC CACCAGGTAT TCGTCTATAC 360
CCCAAGTCAG ATGATAATAT GATCAAAGAA GCACAGAAAA GTAAACTTCC TGCAAAGTCT 420
GCTGCAGTTG CATCCGCAAT GCAAAAGGCT TTTGTAAAGG AAATAGAGCA CTATGAGAAA 480
TCAAAAGCTG ATGATGACAA CAGTGAACGA TACAGTGATA GTTCAGTAAT TGGTGAATCT 540
ACTGGTGATG AGGATTCAAG TGATGATGCT GATGATGAAG GTGAGAGTTC TGATGAAGAA 600
GAGACTCCTG CAAAGGAAAA TACTAAAGAG GAAAATGAAC CAGTGGTAAC ACCCTTGAAG 660
ACGGCAAAGC TAGAAGTACC AATTATGACA AAACTGGGAC TAATACTAGC AAGAGAGGCA 720
AAGAGGACGC CCATAAAGAA CGACACGCCT AAGCGTTCTG CTGGCTATGT CTGCAACTCA 780
TGCAAAAAGT AAAT 795
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orm-0015 OMERI01G38270.1 Oryza meridionalis 81 9e-111 396
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 42 5e-27 118
WERAM-Sei-0085 Si022778m Setaria italica 39 2e-14 76.6
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 38 4e-14 75.9
WERAM-Aet-0097 EMT09079 Aegilops tauschii 40 5e-14 75.5
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 40 7e-14 75.1
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 40 7e-14 75.1
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 40 8e-14 74.7
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 39 9e-14 74.3
WERAM-Zem-0158 GRMZM5G898314_P01 Zea mays 36 2e-13 73.9
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 39 2e-13 73.6
WERAM-Art-0126 AT5G22650.1 Arabidopsis thaliana 37 2e-13 73.2
WERAM-Sob-0059 Sb03g043350.1 Sorghum bicolor 36 3e-13 73.2
WERAM-Prp-0078 EMJ06874 Prunus persica 37 3e-13 72.8
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 39 2e-11 67.0
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 39 2e-11 67.0
WERAM-Mua-0063 GSMUA_Achr3P22840_001 Musa acuminata 32 2e-11 67.0
WERAM-Pot-0048 POPTR_0004s20020.1 Populus trichocarpa 33 3e-11 66.2
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 40 4e-11 65.9
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 40 5e-11 65.5
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 40 5e-11 65.5
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 35 1e-10 63.9
WERAM-Met-0051 KEH38943 Medicago truncatula 31 2e-10 63.5
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 33 3e-10 62.8
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 35 4e-10 62.4
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 34 1e-09 60.5
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 37 2e-09 60.5
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 34 2e-09 60.5
WERAM-Bro-0028 Bo2g024240.1 Brassica oleracea 37 2e-09 59.7
WERAM-Arl-0013 Al_scaffold_0006_2135 Arabidopsis lyrata 32 2e-08 56.6
WERAM-Sot-0008 PGSC0003DMT400006927 Solanum tuberosum 29 9e-08 54.7
WERAM-Sol-0107 Solyc09g009030.2.1 Solanum lycopersicum 29 2e-07 53.9
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 30 3e-07 53.1
WERAM-Thc-0115 EOY33573 Theobroma cacao 31 6e-07 52.0
Created Date 25-Jun-2016