WERAM Information

Tag Content
WERAM ID WERAM-Lep-0059
Ensembl Protein ID LPERR05G23920.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
LPERR05G23920 LPERR05G23920.1 LPERR05G23920.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 3.00e-22 102
Organism Leersia perrieri
Domain Profile
  HDAC HD2
Query: 1  MEFWGIEVKPGQTVKCEPEDDRFLHLSQAALGESKKGTDNAVMYVKVDDQKLVIGSLSAD 60
          MEFWG+ V P    K  PE+D  +H+SQA+L  + K  ++ V+ V V   KLVIG+LS D
Sbjct: 1  MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 61 KFPQIQFDLVFDKKFELSHTSKSAS 85
          KFPQI FDLVFDK+FELSH+   A+
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKAN 85
Query: 153 TPKKPE-TGKKRAAEVVLKTPASDKKAKV-----ATPSGQKTGDKK-GVHVATPHPAKQA 205
           TPKKPE   KKR  E V KTP S KKAK      +TP  QKT +KK G H ATPHPAK+ 
Sbjct: 199 TPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTP--QKTEEKKKGGHTATPHPAKKG 256
Query: 206 SKTPVN 211
            K+PVN
Sbjct: 257 GKSPVN 262
Protein Sequence
(Fasta)		MEFWGIEVKP GQTVKCEPED DRFLHLSQAA LGESKKGTDN AVMYVKVDDQ KLVIGSLSAD 60
KFPQIQFDLV FDKKFELSHT SKSASEQKKL GETDSSASKA KAENNKVDED DDDDDSDDDD 120
SEDGLSPEDD DDDDSSEDDS SDEDEDESDE EETPKKPETG KKRAAEVVLK TPASDKKAKV 180
ATPSGQKTGD KKGVHVATPH PAKQASKTPV NNDKAKEKSP KSGGGSISCK SCSKTFNSEM 240
ALQSHSKAKH SAK 253
Nucleotide Sequence
(Fasta)		ATGGAGTTCT GGGGTATTGA AGTGAAGCCT GGGCAGACTG TCAAATGTGA GCCTGAAGAT 60
GACCGCTTTT TGCACCTTTC TCAGGCTGCA CTCGGGGAAT CAAAGAAAGG AACTGACAAT 120
GCAGTAATGT ATGTCAAAGT TGATGATCAG AAGCTGGTCA TTGGAAGCCT CTCAGCTGAC 180
AAGTTCCCTC AAATCCAGTT TGATTTGGTC TTTGACAAAA AGTTTGAACT GTCACACACT 240
TCAAAGAGTG CCAGCGAGCA GAAAAAACTA GGCGAGACAG ATTCTTCAGC TTCAAAAGCA 300
AAGGCTGAGA ACAATAAGGT TGATGAAGAC GATGATGATG ATGACAGTGA TGATGATGAT 360
TCTGAGGATG GACTTTCACC TGAGGATGAT GATGACGATG ATTCTTCTGA GGATGATTCT 420
AGTGATGAGG ATGAGGATGA GAGTGACGAG GAAGAAACTC CAAAGAAGCC TGAGACTGGC 480
AAGAAGAGAG CAGCTGAAGT TGTGCTGAAG ACGCCTGCAT CTGATAAGAA AGCAAAGGTT 540
GCTACACCAT CTGGCCAGAA GACAGGTGAC AAGAAGGGTG TCCATGTAGC AACTCCACAT 600
CCCGCGAAGC AGGCTAGCAA GACCCCTGTG AACAATGACA AGGCAAAGGA GAAGTCCCCA 660
AAATCCGGTG GTGGGTCAAT TTCTTGCAAG TCATGCAGCA AGACATTCAA CAGTGAAATG 720
GCTCTGCAAT CCCACTCGAA GGCAAAGCAC TCTGCCAAAT GA 763
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 71 2e-79 292
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 72 6e-77 284
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 73 6e-77 284
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 77 7e-76 280
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 92 1e-43 174
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 89 3e-41 165
WERAM-Sei-0085 Si022778m Setaria italica 81 1e-36 150
WERAM-Sob-0127 Sb09g026730.1 Sorghum bicolor 80 2e-35 146
WERAM-Zem-0062 GRMZM2G100146_P01 Zea mays 75 1e-33 140
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 72 2e-31 132
WERAM-Aet-0097 EMT09079 Aegilops tauschii 71 7e-31 131
WERAM-Mua-0006 GSMUA_Achr10P04780_001 Musa acuminata 64 4e-30 128
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 70 2e-29 126
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 74 2e-29 126
WERAM-Prp-0078 EMJ06874 Prunus persica 62 4e-27 119
WERAM-Pot-0109 POPTR_0009s15160.1 Populus trichocarpa 59 2e-25 113
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 58 5e-25 112
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 57 1e-24 110
WERAM-Bro-0028 Bo2g024240.1 Brassica oleracea 58 3e-24 109
WERAM-Sot-0024 PGSC0003DMT400021644 Solanum tuberosum 59 4e-24 108
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 58 4e-24 108
WERAM-Thc-0115 EOY33573 Theobroma cacao 54 1e-23 107
WERAM-Sol-0131 Solyc10g085560.1.1 Solanum lycopersicum 57 5e-23 105
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 53 8e-23 104
WERAM-Met-0051 KEH38943 Medicago truncatula 56 2e-22 102
WERAM-Art-0126 AT5G22650.1 Arabidopsis thaliana 54 4e-22 102
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 56 4e-21 99.0
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 56 4e-21 99.0
WERAM-Arl-0089 fgenesh2_kg.5__ 872__ AT3G44750.1 Arabidopsis lyrata 54 1e-20 97.8
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 51 1e-20 97.4
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 46 1e-18 90.5
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 39 6e-15 78.2
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 39 5e-11 65.5
WERAM-Orm-0014 OMERI01G38240.2 Oryza meridionalis 40 4e-10 62.4
WERAM-Amt-0052 ERN12770 Amborella trichopoda 64 2e-07 53.1
Created Date 25-Jun-2016