WERAM Information

Tag Content
WERAM ID WERAM-Glm-0023
Ensembl Protein ID GLYMA03G34850.3
Gene Name GLYMA_03G190700
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GLYMA03G34850 GLYMA03G34850.3 GLYMA03G34850.3
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 3.00e-27 119
HDAC HD2 5.00e-27 118
Organism Glycine max
Domain Profile
  HDAC HD2
Query: 1  MEFWGVEVKSGESLKVDPGDDKIIHLSNACLGDVTKDKEGLPVALYVKFGNQKLVLGTLS 60
          MEFWGVEVK+G+ L +DPG D+++H+S   LG+ +K+    P+ LYV  G+ KL++GTLS
Sbjct: 1  MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGE-SKNNVTEPIQLYVTVGSDKLLIGTLS 59
Query: 61 SEAFPQISYDLVFEKEFELSHNWKHGSVFFTGFK 94
           E FPQ+S ++V E+ F LSH WK+GSVFF+G+K
Sbjct: 60 HEKFPQLSTEIVLERNFALSHTWKNGSVFFSGYK 93
Query: 233 VHVATPHPSKQTGKATA-------NNKQQTPKSGGDYSCKPCNRSFKTEDALSSHNKAKH 285
           VHVATPHPSKQ GK +        + +QQTPKS G + CK C R+F +E  L SH KAKH
Sbjct: 231 VHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTFTSEMGLQSHTKAKH 290
Query: 286 S 286
           S
Sbjct: 291 S 291
  HDAC HD2
Query: 1  MEFWGVEVKSGESLKVDPGDDKIIHLSNACLGDVTKDKEGLPVALYVKFGNQKLVLGTLS 60
          MEFWG+EVKSG+ + V P +  +IH+S A LG+  K+K+G  V L+VK GNQ LVLGTLS
Sbjct: 1  MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGEC-KNKKGEFVPLHVKVGNQNLVLGTLS 59
Query: 61 SEAFPQISYDLVFEKEFELSHNWKHGSVFFTGFK 94
          +E  PQ+  DLVF+KEFELSH W  GSV+F G+K
Sbjct: 60 TENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYK 93
Query: 242 KQTGKATANNKQQTPKSGGDYSCKPCNRSFKTEDALSSHNKAKHS 286
           K+ G   AN   Q+PKS    SC  C ++F + +AL SHNKAKH+
Sbjct: 201 KKKGGKAAN---QSPKSASQVSCGSCKKTFNSGNALESHNKAKHA 242
Protein Sequence
(Fasta)		MEFWGVEVKS GESLKVDPGD DKIIHLSNAC LGDVTKDKEG LPVALYVKFG NQKLVLGTLS 60
SEAFPQISYD LVFEKEFELS HNWKHGSVFF TGFKAQSQSE SDNDEDSDDF DEDIPVSAAN 120
GKPEIEVKNG IKPDANEAKQ KKIANGEDED SSESESDDDS SEDQLTANGD IESSEGDDDS 180
DDEEEGDDES DEETPKKIEA SNKRGIDSSK KTPVPVKKTK FVTPQKTDSK NVVHVATPHP 240
SKQTGKATAN NKQQTPKSGG DYSCKPCNRS FKTEDALSSH NKAKHSTK 288
Nucleotide Sequence
(Fasta)		TTCAAATTCA AAAAATAATA ATACCAGTAT ATACGGAGCG GATCCCTATA CAAATTCATT 60
CGATCAAATA CTCAGAACTG TTCGGTTTTT CTGGAAATTT TTCTTCTCTC AGCCATCTCT 120
CTCTCTCTCT GCGTCCATGG AGTTTTGGGG TGTTGAGGTG AAAAGTGGAG AATCTCTCAA 180
GGTTGATCCG GGAGATGACA AGATTATCCA CCTTTCAAAT GCATGCCTGG GGGATGTCAC 240
TAAGGATAAA GAAGGTCTAC CAGTAGCCCT GTATGTCAAG TTTGGTAACC AAAAGCTTGT 300
ACTTGGAACG CTTTCTTCTG AAGCTTTTCC TCAGATATCT TATGATTTGG TATTTGAGAA 360
GGAATTTGAG CTATCCCATA ACTGGAAACA TGGAAGTGTC TTCTTTACCG GATTTAAAGC 420
TCAATCTCAG TCAGAGTCTG ATAATGATGA AGATTCTGAT GATTTTGATG AAGATATTCC 480
AGTTAGTGCT GCCAATGGTA AACCTGAGAT TGAGGTGAAG AATGGCATCA AACCTGATGC 540
AAATGAAGCT AAACAGAAGA AGATAGCAAA TGGTGAAGAT GAAGATTCAT CCGAATCTGA 600
ATCTGATGAT GATTCAAGTG AAGATCAGCT CACAGCGAAT GGTGACATAG AAAGTAGTGA 660
AGGTGATGAT GATAGCGATG ATGAGGAGGA GGGGGACGAT GAATCTGATG AGGAGACACC 720
CAAGAAGATT GAAGCAAGCA ATAAGAGGGG TATTGACTCT TCTAAGAAAA CACCTGTTCC 780
TGTGAAGAAG ACAAAATTTG TTACTCCTCA GAAGACTGAT AGCAAGAATG TTGTCCATGT 840
TGCAACTCCT CACCCTTCTA AGCAGACTGG TAAAGCAACT GCTAATAACA AGCAGCAGAC 900
TCCGAAGTCA GGTGGAGATT ACAGCTGCAA GCCTTGCAAC AGGTCATTTA AGACAGAAGA 960
TGCCTTAAGT TCTCATAACA AGGCCAAGCA CAGCACTAAG TGAAGGCTTG CTTTTTGCCC 1020
GAGCAGTGAC AGTGAGTGTT GATGTTTCTG GTGTTGGATG ATTGTGTGAA AAAACAGTTT 1080
AGTTGATGTA GGAAAGCTGG GCTTAGTGAT TTTCAACTTT GATTGGATCA ACTTGAGTTT 1140
GTGGTAACTG CGCTTTGACC TTGATCCCAT GTCGGCCTTC TTTCAACCGA ATCTCTTTGT 1200
GATGAAATGC GTAAATACTC CCTGCAACTC ATGAAATAAG TATTCCTGAC TAAGTCAACT 1260
GGGATTTAAC GTTGCTAAAC CATCAACTAA TTGGGAGCTT TTTTTATCAC TTTTGTTTGT 1320
ATATTTCCAA TCTTCAACCA ATTTTTGTTT AATGACTTTT ATTAACAATT GGAAAATATT 1380
AAAGCTTTAA ATAGTGCCAT GTTTTATGTT TTTGAGAAA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sot-0024 PGSC0003DMT400021644 Solanum tuberosum 54 1e-51 200
WERAM-Prp-0077 EMJ03579 Prunus persica 43 7e-47 184
WERAM-Thc-0115 EOY33573 Theobroma cacao 45 2e-44 176
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 68 2e-35 146
WERAM-Pot-0109 POPTR_0009s15160.1 Populus trichocarpa 67 3e-31 132
WERAM-Sol-0131 Solyc10g085560.1.1 Solanum lycopersicum 62 3e-31 132
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 58 9e-29 124
WERAM-Mua-0006 GSMUA_Achr10P04780_001 Musa acuminata 61 1e-28 124
WERAM-Aet-0097 EMT09079 Aegilops tauschii 59 7e-28 121
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 57 2e-27 120
WERAM-Arl-0089 fgenesh2_kg.5__ 872__ AT3G44750.1 Arabidopsis lyrata 60 3e-27 119
WERAM-Art-0114 AT5G03740.1 Arabidopsis thaliana 54 4e-27 119
WERAM-Met-0051 KEH38943 Medicago truncatula 52 7e-27 118
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 55 1e-26 117
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 55 1e-26 117
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 60 2e-26 116
WERAM-Bro-0186 Bo9g181760.1 Brassica oleracea 55 3e-26 115
WERAM-Sei-0085 Si022778m Setaria italica 54 8e-26 114
WERAM-Sob-0127 Sb09g026730.1 Sorghum bicolor 54 5e-25 112
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 52 4e-24 108
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 59 6e-24 108
WERAM-Zem-0062 GRMZM2G100146_P01 Zea mays 52 7e-24 108
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 51 9e-24 108
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 53 9e-23 104
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 55 1e-22 104
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 55 1e-22 103
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 42 9e-19 91.3
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 42 5e-16 82.4
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 39 2e-14 77.0
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 39 7e-14 75.1
WERAM-Amt-0052 ERN12770 Amborella trichopoda 64 2e-13 73.6
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 42 4e-13 72.8
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 42 4e-13 72.8
WERAM-Orm-0014 OMERI01G38240.2 Oryza meridionalis 50 4e-09 59.3
WERAM-Orgl-0013 OGLUM01G45450.3 Oryza glumaepatula 30 3e-07 52.8
Created Date 25-Jun-2016