WERAM Information

Tag Content
WERAM ID WERAM-Thc-0115
Ensembl Protein ID EOY33573
Gene Name TCM_041517
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
TCM_041517 EOY33573 EOY33573
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 7.00e-31 130
HDAC HD2 7.00e-29 124
Organism Theobroma cacao
Domain Profile
  HDAC HD2
Query: 1  MEFWGVEVKAGKPIKADPGANHVIHLSQATLGESKNK-AESVTLHVNADGQKLVLGTLSH 59
          MEFWG+EVK+GKP+   P    +IH+SQA+LGE KNK  E V LHV    Q LVLGTLS 
Sbjct: 1  MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 60 QNFPQLSFDLVFDQEFELSHNWKNGSVYFLGYKT 93
          +N PQL  DLVFD+EFELSH W  GSVYF+GYKT
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKT 94
Query: 201 TPKKVEASKKRPAEAA--TPVSAKKAKSAATPQKTDGKKGGHTATPHXXXXXXXXXXXXX 258
           TPKK  +SKKR  E     PVSAKKAK A TPQKTD KK G  A                
Sbjct: 164 TPKKPASSKKRANETTPKAPVSAKKAKVAVTPQKTDEKKKGGKAA-----------NQSP 212
Query: 259 XXXXXFSCGSCNKSFGSEGGLESHKKAKH 287
                 SCGSC K+F S   LESH KAKH
Sbjct: 213 KSASQVSCGSCKKTFNSGNALESHNKAKH 241
  HDAC HD2
Query: 1  MEFWGVEVKAGKPIKADPGANHVIHLSQATLGESKNKA-ESVTLHVNADGQKLVLGTLSH 59
          MEFWGVEVK GKP+  DPG + ++H+SQ  LGESKN   E + L+V     KL++GTLSH
Sbjct: 1  MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH 60
Query: 60 QNFPQLSFDLVFDQEFELSHNWKNGSVYFLGYKT 93
          + FPQLS ++V ++ F LSH WKNGSV+F GYK 
Sbjct: 61 EKFPQLSTEIVLERNFALSHTWKNGSVFFSGYKV 94
Query: 211 RPAEAATPVSAKKAKSAATPQKTDGKKGG-HTATPHXXXXX-----------XXXXXXXX 258
            P  +  P S KKAK   TPQKTD KK   H ATPH                        
Sbjct: 203 EPNSSKNPASNKKAK-FVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTP 261
Query: 259 XXXXXFSCGSCNKSFGSEGGLESHKKAKH 287
                F C SC ++F SE GL+SH KAKH
Sbjct: 262 KSAGAFGCKSCTRTFTSEMGLQSHTKAKH 290
Protein Sequence
(Fasta)		MEFWGVEVKA GKPIKADPGA NHVIHLSQAT LGESKNKAES VTLHVNADGQ KLVLGTLSHQ 60
NFPQLSFDLV FDQEFELSHN WKNGSVYFLG YKTFVPDEGD EFDMSSDEES SEDEELPVAA 120
AENGKAKTDV KTSKANAGKP DAVKQAVKIE EPSNNKKTEG DDDESDSEDE SGSDEEDDSE 180
DEDESDEMSM DESSDDEDEE TPKKVEASKK RPAEAATPVS AKKAKSAATP QKTDGKKGGH 240
TATPHPSKQA GKSSAKSPKS GGQFSCGSCN KSFGSEGGLE SHKKAKHGGK
Nucleotide Sequence
(Fasta)		ACAAGTTTCC GCCCTCTTTA AAGCGTTGAT ACTCTCGCGC TTCCCCTTTT TAAAACCCTA 60
GTTCCCCTTC CTCCCAAAAC CCTAGCCCCT CAGTTGCTTC CCTCTCTCCC ACTATCACCA 120
TCATCCATGG AGTTCTGGGG TGTTGAAGTT AAGGCTGGAA AGCCTATTAA AGCAGACCCT 180
GGTGCCAATC ACGTCATCCA TCTTTCCCAG GCAACACTTG GCGAGTCAAA GAACAAAGCA 240
GAATCTGTAA CCCTCCATGT AAATGCTGAT GGGCAGAAAC TCGTTCTTGG AACTCTTTCC 300
CACCAGAATT TCCCTCAATT ATCTTTTGAT TTAGTGTTTG ACCAAGAGTT TGAGCTCTCT 360
CACAACTGGA AAAATGGAAG TGTCTATTTC CTTGGTTACA AAACTTTCGT GCCGGATGAA 420
GGTGATGAAT TTGATATGTC TAGTGATGAA GAAAGTAGCG AGGATGAGGA GCTTCCTGTG 480
GCTGCTGCAG AAAATGGAAA AGCTAAGACA GATGTAAAAA CATCTAAGGC TAATGCTGGG 540
AAACCTGATG CTGTAAAACA AGCTGTGAAG ATAGAAGAAC CAAGCAATAA CAAGAAAACT 600
GAGGGTGATG ATGATGAGAG TGATTCTGAG GATGAAAGTG GTTCTGATGA GGAAGATGAT 660
TCTGAGGATG AAGATGAGTC TGATGAGATG TCTATGGATG AAAGTTCTGA TGATGAGGAT 720
GAGGAGACAC CTAAGAAGGT TGAGGCAAGC AAGAAGAGAC CTGCAGAAGC TGCTACCCCT 780
GTTTCTGCAA AAAAGGCAAA ATCTGCAGCA ACACCTCAGA AGACAGATGG TAAGAAGGGT 840
GGTCACACAG CAACACCTCA CCCATCAAAG CAAGCTGGGA AATCTTCTGC AAAGAGTCCG 900
AAGTCTGGTG GTCAATTCTC TTGTGGATCT TGTAACAAGT CATTCGGCTC TGAGGGTGGT 960
CTAGAATCTC ACAAAAAGGC CAAGCATGGT GGCAAATGAA TGGTGTAATA CATAACATGC 1020
TCTTATGTTG TGTGCATGTT TAATTTTGGG GGAGAGATGT GTTCTGTTGT GGTTTTGGTA 1080
GATTATGCTT ATCAGTAAAT GAGGGGTCTA TGGTTAACAA GACTTTGCGG ATCCTTTTTT 1140
CTGATTCGGC ACTATCATTT GGGTTATTAT CCTGGAAAGG GTTTAGATTG TGATGCCGTT 1200
ATCTATAATT TATGTGTTCT ATTCATGCCA GTATGCATTT ACATGGTCTT AAATGAAAGG 1260
TTCATGCTTT TCAAATTGTA TGTTGAAGTG AAGTTTTGCG TGGCGATGTT ATTCATTTGC 1320
CAGTTGACTT TTATGTTATG GTTCATTGCA GCTTCCTGCT 1361
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sot-0008 PGSC0003DMT400006927 Solanum tuberosum 50 2e-48 189
WERAM-Sol-0107 Solyc09g009030.2.1 Solanum lycopersicum 50 6e-48 188
WERAM-Prp-0078 EMJ06874 Prunus persica 50 6e-45 178
WERAM-Glm-0023 GLYMA03G34850.3 Glycine max 45 8e-41 164
WERAM-Mua-0063 GSMUA_Achr3P22840_001 Musa acuminata 46 3e-38 155
WERAM-Pot-0109 POPTR_0009s15160.1 Populus trichocarpa 68 6e-33 138
WERAM-Viv-0052 VIT_08s0007g03940.t01 Vitis vinifera 66 9e-33 137
WERAM-Art-0083 AT3G44750.1 Arabidopsis thaliana 65 1e-30 130
WERAM-Brd-0043 BRADI2G14120.1 Brachypodium distachyon 48 1e-30 130
WERAM-Arl-0089 fgenesh2_kg.5__ 872__ AT3G44750.1 Arabidopsis lyrata 64 4e-30 129
WERAM-Ors-0052 OS05T0597100-01 Oryza sativa 56 2e-28 123
WERAM-Ori-0055 BGIOSGA017430-PA Oryza indica 56 2e-28 123
WERAM-Orbr-0066 OB05G35770.1 Oryza brachyantha 55 7e-28 121
WERAM-Sei-0085 Si022778m Setaria italica 56 9e-28 121
WERAM-Brr-0103 Bra020209.1-P Brassica rapa 61 1e-27 120
WERAM-Bro-0028 Bo2g024240.1 Brassica oleracea 60 2e-27 120
WERAM-Sob-0127 Sb09g026730.1 Sorghum bicolor 57 2e-27 119
WERAM-Hov-0097 MLOC_70585.1 Hordeum vulgare 59 1e-26 117
WERAM-Zem-0158 GRMZM5G898314_P01 Zea mays 57 3e-26 115
WERAM-Orl-0054 KN539082.1_FGP007 Oryza longistaminata 55 9e-25 111
WERAM-Aet-0097 EMT09079 Aegilops tauschii 55 3e-24 109
WERAM-Tru-0046 TRIUR3_21067-P1 Triticum urartu 55 3e-24 109
WERAM-Orb-0056 OBART05G28290.1 Oryza barthii 56 4e-24 109
WERAM-Orp-0054 OPUNC05G25830.1 Oryza punctata 56 4e-24 108
WERAM-Lep-0059 LPERR05G23920.1 Leersia perrieri 54 7e-24 108
WERAM-Php-0037 PP1S183_93V6.3 Physcomitrella patens 51 6e-23 105
WERAM-Met-0051 KEH38943 Medicago truncatula 52 8e-23 104
WERAM-Tra-0342 TRAES3BF048700110CFD_t1 Triticum aestivum 47 7e-22 101
WERAM-Org-0014 ORGLA01G0351500.1 Oryza glaberrima 45 2e-17 87.0
WERAM-Orni-0013 ONIVA01G46280.1 Oryza nivara 47 3e-17 86.3
WERAM-Orr-0013 ORUFI01G44570.1 Oryza rufipogon 47 3e-17 86.3
WERAM-Amt-0052 ERN12770 Amborella trichopoda 65 1e-14 77.8
WERAM-Sem-0061 EFJ07202 Selaginella moellendorffii 41 3e-14 76.6
Created Date 25-Jun-2016