| Tag |
Content |
| WERAM ID |
WERAM-Xim-0081 |
| Ensembl Protein ID |
ENSXMAP00000007517.1 |
| Gene Name |
hdac11 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-IV |
6.60e-155 |
514.8 |
42 |
328 |
| HDAC |
Class-I |
1.80e-23 |
83.6 |
36 |
321 |
|
| Organism |
Xiphophorus maculatus |
| Domain Profile |
HDAC Class-IV
class-4.txt 1 leklhpfdaskwkkvikflkeeklledealveareaskedllvvhtrkylkslksslkvatiteiplvaflpnflvqrkvlrplrlqag 89
leklhpfd++kw+kvi+flkee++++de +veareas+edllvvht++yl slk+s++vatiteipl+++lpn+lvq+kvlrplr+q+g
ENSXMAP00000007517.1 42 LEKLHPFDSGKWGKVIRFLKEEQFITDENIVEAREASEEDLLVVHTKRYLCSLKWSFVVATITEIPLLVILPNCLVQQKVLRPLRTQTG 130
79*************************************************************************************** PP
class-4.txt 90 GtilaaklaverGwainvGGGfhhcsserGGGfcayaditlaikflferlkaisrviiidldahqGnGherdfaddkrvyildvynrei 178
Gti+a+klaverGwain+GGGfhhcs ++GGGfcayaditlaikflfer+++isr++iidldahqGnGherdf +d+rv+i+d+yn++i
ENSXMAP00000007517.1 131 GTIMAGKLAVERGWAINIGGGFHHCSGDKGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFLGDTRVFIMDMYNHNI 219
***************************************************************************************** PP
class-4.txt 179 ypkdrvakeairrkvelesgtedeeylekleralkkslqefepdlvvynaGtdvleGdrlGalkispegivkrdevvfrlvrakdipiv 267
yp+d+ ak+ai+rkvel++gted+eyl+k+e + + +l+e +pd++vynaGtd+l+Gd+lG+l+isp+givkrde+vfr +++++ipi+
ENSXMAP00000007517.1 220 YPGDEYAKRAIKRKVELDWGTEDSEYLQKVELHSEGALNEVRPDIIVYNAGTDILDGDPLGGLSISPQGIVKRDEIVFRAAKQRGIPIL 308
***************************************************************************************** PP
class-4.txt 268 mvtsGGyqkrsarviadsil 287
mvtsGGyqk++ar+iadsil
ENSXMAP00000007517.1 309 MVTSGGYQKKTARIIADSIL 328
******************95 PP
HDAC Class-I
class-1.txt 10 dvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdgl 98
+++ + ++ hp ++ + ++ + + + +iv++++as e+ll +h++ y+ lk + + +++e+ + +c v +++
ENSXMAP00000007517.1 36 NITFMGLEKLHPFDSGKWGKVIRFLKEEQFITDENIVEAREASEEDLLVVHTKRYLCSLKWSFVV---ATITEIPLLVILPNCLVQQKV 121
55555566778888888888888888888999999********************9999876544...3445667889999******** PP
class-1.txt 99 feycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlhhGDgveeafyttdr 184
++ tG+++ a kL e+ ain GG+hh ++ Gfc Di lai l +r + id+d h G+g e f r
ENSXMAP00000007517.1 122 LRPLRTQTGGTIMAG-KLA-VERGWAINIGGGFHHCSGDKGGGFCAYADITLAIKFLFErveGISRATIIDLDAHQGNGHERDFLGDTR 208
************876.554.45788*****************************99987222467999********************* PP
class-1.txt 185 vmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikg 273
v+ + + y+++ +Pg + ++a k v l+ g +D++y + ++ + ++ +P+++v + G+D l gD+lg ++s +g
ENSXMAP00000007517.1 209 VFIMDM--YNHNIYPGDE--YAKRAIKR-----KVELDWGTEDSEYLQKVELHSEGALNEVRPDIIVYNAGTDILDGDPLGGLSISPQG 288
*99876..5666699853..33444444.....589***************************************************** PP
class-1.txt 274 hae....cvkfvksfnlpllvlGGGGYtlrnvaR 303
+ + + + k+ +p+l++ GGY+++ +aR
ENSXMAP00000007517.1 289 IVKrdeiVFRAAKQRGIPILMVTSGGYQKK-TAR 321
987555445677999************875.455 PP
|
Protein Sequence
(Fasta) | MSAKEDNEGK SSFHHTDLYG SIPPTCLPIV YHPGYNITFM GLEKLHPFDS GKWGKVIRFL 60
KEEQFITDEN IVEAREASEE DLLVVHTKRY LCSLKWSFVV ATITEIPLLV ILPNCLVQQK 120
VLRPLRTQTG GTIMAGKLAV ERGWAINIGG GFHHCSGDKG GGFCAYADIT LAIKFLFERV 180
EGISRATIID LDAHQGNGHE RDFLGDTRVF IMDMYNHNIY PGDEYAKRAI KRKVELDWGT 240
EDSEYLQKVE LHSEGALNEV RPDIIVYNAG TDILDGDPLG GLSISPQGIV KRDEIVFRAA 300
KQRGIPILMV TSGGYQKKTA RIIADSILNL RQQGLIGAKA TEREGLSQLV THLTQSSGSA 360
GSAHTAV 367Protein Fasta Sequence
>ENSXMAP00000007517.1|Class-I|Xiphophorus maculatus
MSAKEDNEGKSSFHHTDLYGSIPPTCLPIVYHPGYNITFMGLEKLHPFDSGKWGKVIRFLKEEQFITDENIVEAREASEEDLLVVHTKRYLCSLKWSFVVATITEIPLLVILPNCLVQQKVLRPLRTQTGGTIMAGKLAVERGWAINIGGGFHHCSGDKGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFLGDTRVFIMDMYNHNIYPGDEYAKRAIKRKVELDWGTEDSEYLQKVELHSEGALNEVRPDIIVYNAGTDILDGDPLGGLSISPQGIVKRDEIVFRAAKQRGIPILMVTSGGYQKKTARIIADSILNLRQQGLIGAKATEREGLSQLVTHLTQSSGSAGSAHTAV |
Nucleotide Sequence
(Fasta) | ATGTCTGCTA AAGAAGACAA TGAAGGGAAA TCGAGCTTTC ACCACACCGA TTTGTACGGC 60
AGCATCCCTC CAACATGTCT GCCCATCGTG TACCACCCTG GCTATAACAT CACATTCATG 120
GGCCTGGAAA AGCTCCACCC ATTTGACTCA GGAAAGTGGG GGAAAGTCAT CCGCTTCCTG 180
AAAGAGGAGC AGTTCATCAC CGATGAGAAC ATTGTGGAAG CCCGTGAAGC CTCAGAGGAG 240
GATCTGCTGG TGGTTCACAC GAAGCGTTAT CTCTGTAGTT TAAAGTGGTC TTTTGTGGTG 300
GCAACTATCA CTGAAATCCC ACTCCTGGTG ATTTTACCTA ACTGTCTGGT TCAACAGAAG 360
GTGCTGAGAC CTTTACGGAC CCAAACAGGA GGAACAATAA TGGCTGGGAA GCTGGCTGTT 420
GAGCGAGGAT GGGCCATAAA TATAGGGGGA GGTTTCCACC ACTGCTCCGG TGACAAGGGA 480
GGCGGCTTCT GTGCCTATGC TGACATCACA CTGGCCATCA AGTTTCTCTT TGAGAGAGTG 540
GAAGGCATCT CCAGAGCCAC CATCATTGAC CTTGATGCTC ATCAGGGAAA TGGACACGAG 600
CGAGACTTTT TGGGCGACAC CAGAGTGTTC ATAATGGACA TGTATAATCA CAACATCTAT 660
CCAGGGGACG AATATGCCAA ACGAGCCATA AAGAGGAAGG TGGAGCTAGA CTGGGGCACT 720
GAAGATTCAG AGTACCTTCA GAAGGTGGAG CTTCACTCTG AGGGAGCGCT GAACGAGGTT 780
CGTCCGGATA TCATCGTCTA TAATGCAGGG ACAGACATCT TGGACGGGGA TCCCCTCGGA 840
GGCCTCTCCA TATCTCCACA GGGCATTGTT AAAAGGGACG AGATTGTGTT CAGGGCCGCA 900
AAGCAACGAG GTATTCCCAT CCTGATGGTG ACGTCAGGAG GGTACCAGAA GAAAACGGCG 960
CGGATTATCG CTGACTCCAT TCTTAACTTA CGTCAGCAGG GTTTGATTGG AGCCAAAGCT 1020
ACGGAGAGGG AGGGATTGTC ACAACTGGTG ACCCACTTGA CCCAAAGCTC CGGTTCTGCA 1080
GGATCAGCAC ACACCGCTGT GTGA
1105Nucleotide Fasta Sequence
>ENSXMAP00000007517.1|Class-I|Xiphophorus maculatus
ATGTCTGCTAAAGAAGACAATGAAGGGAAATCGAGCTTTCACCACACCGATTTGTACGGCAGCATCCCTCCAACATGTCTGCCCATCGTGTACCACCCTGGCTATAACATCACATTCATGGGCCTGGAAAAGCTCCACCCATTTGACTCAGGAAAGTGGGGGAAAGTCATCCGCTTCCTGAAAGAGGAGCAGTTCATCACCGATGAGAACATTGTGGAAGCCCGTGAAGCCTCAGAGGAGGATCTGCTGGTGGTTCACACGAAGCGTTATCTCTGTAGTTTAAAGTGGTCTTTTGTGGTGGCAACTATCACTGAAATCCCACTCCTGGTGATTTTACCTAACTGTCTGGTTCAACAGAAGGTGCTGAGACCTTTACGGACCCAAACAGGAGGAACAATAATGGCTGGGAAGCTGGCTGTTGAGCGAGGATGGGCCATAAATATAGGGGGAGGTTTCCACCACTGCTCCGGTGACAAGGGAGGCGGCTTCTGTGCCTATGCTGACATCACACTGGCCATCAAGTTTCTCTTTGAGAGAGTGGAAGGCATCTCCAGAGCCACCATCATTGACCTTGATGCTCATCAGGGAAATGGACACGAGCGAGACTTTTTGGGCGACACCAGAGTGTTCATAATGGACATGTATAATCACAACATCTATCCAGGGGACGAATATGCCAAACGAGCCATAAAGAGGAAGGTGGAGCTAGACTGGGGCACTGAAGATTCAGAGTACCTTCAGAAGGTGGAGCTTCACTCTGAGGGAGCGCTGAACGAGGTTCGTCCGGATATCATCGTCTATAATGCAGGGACAGACATCTTGGACGGGGATCCCCTCGGAGGCCTCTCCATATCTCCACAGGGCATTGTTAAAAGGGACGAGATTGTGTTCAGGGCCGCAAAGCAACGAGGTATTCCCATCCTGATGGTGACGTCAGGAGGGTACCAGAAGAAAACGGCGCGGATTATCGCTGACTCCATTCTTAACTTACGTCAGCAGGGTTTGATTGGAGCCAAAGCTACGGAGAGGGAGGGATTGTCACAACTGGTGACCCACTTGACCCAAAGCTCCGGTTCTGCAGGATCAGCACACACCGCTGTGTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
