WERAM Information

Tag Content
WERAM ID WERAM-Xim-0034
Ensembl Protein ID ENSXMAP00000003426.1
Gene Name prdm1c
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXMAG00000003417.1 ENSXMAT00000003431.1 ENSXMAP00000003426.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 2.40e-37 127.6 92 196
Organism Xiphophorus maculatus
Domain Profile
  HMT RIZ
               RIZ.txt  12 keglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLaalqineqif 100
                            e lgv +k+ i+kg++fGP+vGe ++ +++ +na+++++w+++ ++g+ ++i+D+ +ee+snW+ryvn Ars eeqNL+a+qi+ +if
  ENSXMAP00000003426.1  92 TEVLGVTSKELIPKGTRFGPLVGESYTSKTLPKNADSRYFWRVF-SEGQLHHILDGLNEEQSNWMRYVNPARSVEEQNLVACQIGLDIF 179
                           4679****************************************.99****************************************** PP
               RIZ.txt 101 YktikdIepdeELLvwy 117
                           ++tik+++pd+ELLvwy
  ENSXMAP00000003426.1 180 FYTIKPLQPDQELLVWY 196
                           ***************** PP
Protein Sequence
(Fasta)		MCGSSQGFKA SSSECTTDML TSERSPQSIG ATSVTGTQNV DMRSWSEANF EEQCTYIVKD 60
HPLEEESKSH GKTRAERSLP RNLALKRCYS STEVLGVTSK ELIPKGTRFG PLVGESYTSK 120
TLPKNADSRY FWRVFSEGQL HHILDGLNEE QSNWMRYVNP ARSVEEQNLV ACQIGLDIFF 180
YTIKPLQPDQ ELLVWYSSEL AQRCNYPHRG QLAIKTNEQI QACEKMKGKQ GHTVSEILRD 240
EPSKPKSICL RHQDSQVFST SVPVFPLCSN TVYPMQSNLE SPHGYRYVPL LSLAPYSAST 300
AKRPALSTPI PTNLHFALQH TQDAGKTELH QKPCVSKDVH STFRESPYLL PHYSLGLLPH 360
SLPFYNEQLK PHLPTSSKFL PFDNYAHFLH PSDSGSKDFL LVSSNCKQDV SLMQNNDHKD 420
TNDLHSKKIN YLKNTSTDLR DFKYSACTNV YTDLTASIKA SSPPIGINLH GKPSFAPREC 480
SPPVATAASS NYLPSTPTSA TQSNTEDALD LGRQKRGGQI IGYKTLSYPL TRQNGKIRYE 540
CNICGKIFGQ LSNLKVHLRV HSGERPFKCQ TCNKNFTQLA HLQKHYLVHT GEKPHECKVC 600
HKRFSSTSNL KTHQRLHSGE RPYQCKLCPA RFTQFIHLKL HKRLHTGEGT HRCPLCSSTY 660
LHYSSLQVHL QGFCPLSPSA SRRLSPEELQ RVNSEIERFD MSEAAEQLEV VATEAEIDKG 720
NIIDLIQKID NNILSLQDVT RGKAELSISR SAEECTAAQM HYHSPMVLPP ASIKLESGCI 780
SET 783
Nucleotide Sequence
(Fasta)		CACAGTCAGC CACGCTTAGG TAGGCTGTGG TCGGGTGAGT GACAGAAGAC AAGAGACGCA 60
GAGAATAGAA ACTCAACCTC TAGGAGAGCA CAGACAGCCT GCCTTATGTG TGGCTCCTCT 120
CAAGGCTTTA AAGCCTCGTC TTCTGAATGC ACCACAGACA TGCTAACCTC AGAGAGGTCA 180
CCACAGAGCA TAGGAGCTAC CTCTGTGACA GGTACACAAA ATGTAGATAT GAGATCGTGG 240
AGCGAAGCCA ACTTTGAGGA GCAGTGCACC TACATTGTGA AAGACCATCC CCTGGAGGAA 300
GAGTCCAAAA GCCATGGCAA AACAAGAGCC GAGAGGTCTT TGCCCAGAAA CCTTGCCCTG 360
AAACGTTGCT ACAGTTCTAC AGAGGTGCTT GGAGTGACCA GTAAGGAGTT GATTCCAAAG 420
GGTACCCGTT TTGGTCCTCT TGTTGGCGAA AGCTACACCA GCAAAACTCT GCCAAAAAAT 480
GCTGACAGCA GATACTTCTG GAGGGTCTTC TCAGAGGGGC AACTTCACCA TATCCTGGAT 540
GGTTTGAATG AGGAACAAAG CAACTGGATG CGTTATGTCA ACCCAGCAAG ATCAGTAGAA 600
GAGCAGAATC TGGTTGCCTG CCAGATAGGT TTGGACATCT TCTTTTACAC AATCAAACCA 660
CTTCAGCCAG ATCAGGAGCT TCTGGTGTGG TACAGCTCTG AACTTGCCCA GCGTTGCAAC 720
TACCCTCATC GTGGCCAACT AGCTATTAAG ACAAATGAGC AGATTCAGGC TTGTGAAAAG 780
ATGAAAGGAA AACAAGGGCA CACTGTTTCT GAGATTCTCC GAGATGAACC TTCCAAACCT 840
AAATCTATCT GTCTTAGACA CCAGGACAGT CAGGTGTTTT CAACAAGTGT ACCAGTTTTT 900
CCCTTATGTT CCAATACTGT CTACCCAATG CAGTCCAACT TGGAGTCCCC TCATGGCTAC 960
AGATATGTTC CTTTGCTATC TTTGGCACCA TACAGCGCTT CTACTGCCAA AAGGCCAGCA 1020
TTAAGCACTC CCATTCCAAC TAATTTGCAC TTCGCCCTGC AACACACTCA AGACGCTGGC 1080
AAAACTGAAC TTCATCAAAA ACCTTGTGTT TCTAAGGATG TTCACTCCAC TTTCAGGGAG 1140
AGCCCCTATC TATTGCCTCA CTACTCACTG GGCCTTCTCC CGCATTCGTT ACCATTCTAC 1200
AATGAACAAC TGAAACCACA CTTGCCCACA TCCTCTAAGT TTCTACCTTT CGACAACTAT 1260
GCACACTTTC TACATCCTTC AGATAGTGGT TCCAAAGACT TTTTACTTGT GTCATCCAAC 1320
TGCAAACAAG ACGTCAGTCT TATGCAAAAC AATGACCACA AAGACACCAA TGACCTCCAC 1380
TCCAAAAAGA TAAACTACCT CAAGAATACT TCAACTGACC TCAGAGACTT CAAATACTCT 1440
GCTTGCACCA ATGTCTACAC AGACCTTACT GCATCTATCA AGGCCAGCTC CCCACCCATT 1500
GGCATTAATC TCCATGGAAA ACCTTCTTTT GCACCTCGGG AATGCTCACC TCCAGTTGCT 1560
ACGGCTGCCT CCTCAAACTA CCTTCCTTCC ACACCTACCT CTGCCACTCA GAGCAATACT 1620
GAAGATGCAT TGGATCTTGG GAGGCAAAAG AGAGGAGGCC AGATCATTGG CTACAAGACC 1680
CTGTCTTATC CACTCACAAG GCAAAATGGA AAGATTAGGT ATGAATGCAA CATCTGTGGA 1740
AAGATCTTTG GGCAGCTGTC CAATCTCAAG GTTCATCTGC GAGTGCACAG CGGCGAGCGT 1800
CCATTTAAAT GTCAGACCTG TAACAAGAAC TTCACTCAGC TGGCACACTT GCAAAAACAC 1860
TACCTGGTTC ACACAGGAGA GAAACCTCAC GAGTGCAAGG TGTGCCATAA GAGATTTAGC 1920
AGCACTAGCA ACCTGAAGAC CCACCAGAGA TTACACTCTG GTGAGAGGCC TTACCAGTGC 1980
AAGCTCTGTC CAGCCCGATT TACTCAATTT ATTCACCTCA AGCTTCACAA GCGGCTGCAT 2040
ACAGGGGAGG GGACTCACCG CTGTCCTCTC TGCTCCAGTA CGTATCTTCA CTACAGCAGC 2100
CTGCAGGTGC ACCTCCAAGG CTTCTGCCCT CTTTCCCCCT CAGCATCCCG GAGGCTGTCA 2160
CCAGAGGAGC TACAACGGGT CAATTCTGAG ATAGAGAGGT TCGACATGAG TGAGGCCGCA 2220
GAGCAGCTAG AAGTAGTGGC CACTGAGGCC GAGATAGACA AAGGGAACAT CATTGACCTG 2280
ATACAAAAGA TAGATAATAA TATCTTAAGC CTCCAAGATG TTACCAGAGG GAAGGCCGAA 2340
CTGAGCATCT CTAGATCAGC AGAGGAGTGT ACCGCTGCTC AGATGCATTA TCACAGTCCC 2400
ATGGTTTTGC CACCAGCAAG CATCAAGCTG GAGTCAGGCT GCATTTCAGA GACTTAAGAC 2460
TGACCTGCTA ATCCCACCAA ATAATCCTTA GAGGCCAACT CAGCAGCTGT CTGTCACTGT 2520
CCTATTTGAA GTAAAGCCTT ATCTCTATCA TGGATTGCCT ATATACTCAA TAGGGATTTG 2580
AGCTCATCAA GAGTCAAGAC ATTGCCAGCA TGACCTGGGA AAAAAACAGA CTTCAGTGAT 2640
TTAATATTCT TATGTTTTTA TAATTTATTC AGTTACTGAT TTGAATCTAA TGTGTGTAAA 2700
AATTCAATAC TTGCTATATA TTTGGATACA TATTTTTAAA CATTTGAAAC AATAAATTAT 2760
TACCAAA 2768
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pof-0234 ENSPFOP00000019495.1 Poecilia formosa 93 0.0 1502
WERAM-Orn-0181 ENSONIP00000018515.1 Oreochromis niloticus 67 0.0 996
WERAM-Gaa-0096 ENSGACP00000012338.1 Gasterosteus aculeatus 61 0.0 817
WERAM-Ten-0146 ENSTNIP00000015268.1 Tetraodon nigroviridis 58 0.0 777
WERAM-Tar-0096 ENSTRUP00000019508.1 Takifugu rubripes 57 0.0 741
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 44 2e-168 590
WERAM-Leo-0172 ENSLOCP00000020417.1 Lepisosteus oculatus 43 2e-164 577
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 45 2e-162 570
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 42 5e-156 549
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 41 7e-156 548
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 41 2e-154 543
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 41 2e-154 543
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 41 3e-154 543
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 41 3e-154 543
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 43 3e-154 543
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 43 4e-154 542
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 41 9e-154 541
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 41 1e-153 541
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 41 1e-153 541
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 41 5e-153 539
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 41 1e-152 538
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 41 6e-152 535
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 43 8e-151 531
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 43 2e-148 524
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 41 2e-146 516
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 37 1e-121 434
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 37 9e-117 418
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 58 1e-88 325
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 55 2e-88 324
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 55 3e-88 323
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 55 3e-88 323
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 55 4e-88 323
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 56 4e-88 323
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 58 2e-87 321
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 58 2e-87 320
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 55 4e-87 320
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 53 5e-87 320
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 57 3e-86 317
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 57 7e-86 316
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 56 8e-86 315
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 56 8e-86 315
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 51 9e-86 315
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 57 2e-85 314
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 63 2e-85 314
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 56 3e-85 313
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 58 4e-85 313
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 58 6e-85 313
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 51 6e-85 313
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 56 1e-84 311
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 59 1e-84 311
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 62 3e-84 310
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 56 5e-84 310
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 44 3e-70 264
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 56 4e-66 250
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 47 1e-65 249
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 45 8e-65 246
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 47 5e-63 240
WERAM-Lac-0194 ENSLACP00000022113.1 Latimeria chalumnae 61 1e-62 239
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 59 9e-51 199
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 44 8e-28 123
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 38 7e-23 106
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 37 3e-22 104
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 39 2e-18 92.0
Created Date 25-Jun-2016