WERAM Information

Tag Content
WERAM ID WERAM-Gam-0040
Ensembl Protein ID ENSGMOP00000004090.1
Gene Name prdm1b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGMOG00000003865.1 ENSGMOT00000004216.1 ENSGMOP00000004090.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 3.20e-35 120.9 49 162
Organism Gadus morhua
Domain Profile
  HMT RIZ
               RIZ.txt   4 elaessipkeg.lgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLa 91 
                           +l++ss ++   +gv++k++i++g++fGP+ G ++++++v ++a++k++w+i++ + + +++vD++d +ksnW+r+vn Ar   eqNL+
  ENSGMOP00000004090.1  49 TLQHSSANEXXvTGVFSKEYIPQGTRFGPLQGVVYTKDNVPKMADRKYFWRIYRGR-QLHHFVDGEDVQKSNWMRFVNPARTLSEQNLV 136
                           5666666666559****************************************655.56666*************************** PP
               RIZ.txt  92 alqineqifYktikdIepdeELLvwy 117
                           a+q+++++f++t++++ep +ELLvwy
  ENSGMOP00000004090.1 137 ACQNGQEVFFYTMRPVEPSQELLVWY 162
                           ************************** PP
Protein Sequence
(Fasta)		MKTEKSPRDM SQWSEEDFAL SCTYIVPDQV SEPGFTLPRA MTSVPRNLTL QHSSANEXXV 60
TGVFSKEYIP QGTRFGPLQG VVYTKDNVPK MADRKYFWRI YRGRQLHHFV DGEDVQKSNW 120
MRFVNPARTL SEQNLVACQN GQEVFFYTMR PVEPSQELLV WYSAEFSQRL CGHQQHDGHR 180
HSEYTLAPPR GDVEVLERDT PPDTPEGYVM DFSATAERXX XXXXXXXXXX XXXXXXXXXX 240
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 300
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 360
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 420
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXVHLR VHSGERPFQC DLCKKSFTQL 480
AHLQKHNLVH TGEKPHECQV CHKRFSSTSN LKTHLRLHSG EKPFQCKLCG TKFTQYIHLK 540
LHRRLHTGHQ RPYRCPHCAV AYFHRFSLRL HQRACCQAQG SPANAFVRDM VERFDASQEA 600
EALPEGASAS QVEEAAERWM ARGSEGVEGK GDRKEAGV 638
Nucleotide Sequence
(Fasta)		ATGAAGACAG AGAAGTCCCC GCGGGACATG AGCCAGTGGT CGGAGGAGGA TTTCGCCCTC 60
AGCTGCACCT ACATCGTGCC GGACCAGGTG TCCGAGCCCG GATTCACCCT CCCCAGAGCC 120
ATGACCTCCG TCCCACGAAA CCTCACCCTG CAACACAGCT CAGCCAATGA GNNNNNNGTG 180
ACGGGTGTGT TCAGTAAGGA GTATATACCC CAGGGCACAC GCTTCGGACC CCTGCAGGGA 240
GTCGTTTACA CCAAGGACAA CGTCCCCAAG ATGGCGGACA GGAAGTACTT CTGGAGGATC 300
TACCGAGGCC GCCAGCTCCA CCACTTCGTC GACGGCGAAG ACGTGCAGAA AAGCAACTGG 360
ATGCGCTTCG TGAATCCGGC GCGGACGCTG TCGGAGCAGA ACCTGGTGGC CTGTCAGAAC 420
GGCCAGGAGG TGTTCTTCTA CACCATGCGG CCCGTGGAGC CCAGCCAGGA GCTGCTGGTC 480
TGGTACAGCG CAGAGTTCTC CCAGAGGCTC TGTGGACACC AGCAGCACGA CGGCCACAGA 540
CACAGTGAGT ACACCCTGGC TCCTCCGAGG GGCGACGTGG AGGTGCTGGA GAGAGACACG 600
CCACCGGACA CGCCCGAGGG CTACGTGATG GACTTCAGCG CCACGGCCGA GAGGANNNNN 660
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 720
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 780
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 840
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 900
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 960
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1020
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1080
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1140
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1200
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1260
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1320
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNGT TCACCTCCGC 1380
GTCCACAGCG GCGAGCGGCC CTTCCAGTGT GACCTGTGTA AGAAGAGCTT CACGCAGCTC 1440
GCACACCTCC AGAAGCACAA CCTAGTCCAC ACCGGAGAGA AGCCCCACGA GTGCCAGGTG 1500
TGTCACAAGC GCTTCAGCAG CACCAGCAAC CTGAAGACCC ACCTGCGTCT CCACTCGGGG 1560
GAGAAGCCCT TCCAGTGCAA GCTGTGCGGG ACCAAGTTCA CGCAGTACAT CCACCTGAAG 1620
CTGCACCGCC GGCTCCACAC CGGCCACCAG CGGCCCTACC GTTGCCCCCA CTGTGCCGTC 1680
GCCTACTTCC ACCGCTTCTC CCTGCGGCTG CACCAGCGCG CCTGCTGCCA GGCCCAGGGC 1740
AGCCCGGCCA ACGCCTTCGT CAGGGACATG GTGGAGCGCT TTGACGCCAG CCAGGAGGCG 1800
GAGGCCCTGC CCGAGGGGGC GTCGGCCTCA CAGGTGGAGG AGGCGGCCGA GCGGTGGATG 1860
GCGCGCGGCT CGGAGGGCGT CGAGGGAAAG GGGGACCGCA AGGAGGCCGG CGTG 1915
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Xim-0207 ENSXMAP00000016799.1 Xiphophorus maculatus 59 7e-82 302
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 55 3e-79 293
WERAM-Orn-0164 ENSONIP00000017081.1 Oreochromis niloticus 74 1e-78 291
WERAM-Tar-0068 ENSTRUP00000013557.1 Takifugu rubripes 55 2e-78 290
WERAM-Gaa-0023 ENSGACP00000003553.1 Gasterosteus aculeatus 77 4e-78 290
WERAM-Pof-0037 ENSPFOP00000003054.2 Poecilia formosa 75 2e-75 281
WERAM-Ten-0207 ENSTNIP00000020889.1 Tetraodon nigroviridis 75 3e-74 277
WERAM-Leo-0040 ENSLOCP00000005995.1 Lepisosteus oculatus 66 4e-64 243
WERAM-Lac-0165 ENSLACP00000019582.1 Latimeria chalumnae 60 4e-55 213
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 57 8e-55 212
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 64 1e-54 212
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 57 1e-54 211
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 57 2e-54 211
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 57 2e-54 211
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 60 2e-54 211
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 66 6e-54 209
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 54 7e-54 209
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 60 2e-53 208
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 60 2e-53 207
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 60 2e-53 207
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 60 2e-53 207
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 60 2e-53 207
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 60 2e-53 207
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 57 2e-53 207
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 60 3e-53 207
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 60 3e-53 207
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 57 3e-53 207
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 65 4e-53 206
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 60 4e-53 206
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 57 4e-53 206
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 60 8e-53 206
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 63 9e-53 205
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 55 1e-52 205
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 63 1e-52 205
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 63 1e-52 205
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 63 1e-52 205
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 63 1e-52 205
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 63 1e-52 205
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 65 1e-52 205
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 60 1e-52 205
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 59 1e-52 205
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 56 2e-52 204
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 64 2e-52 204
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 64 2e-52 204
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 64 2e-52 204
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 58 2e-52 204
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 64 2e-52 204
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 63 3e-52 204
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 57 4e-52 203
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 58 4e-52 203
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 59 5e-52 203
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 58 6e-52 202
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 58 7e-52 202
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 55 1e-51 201
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 59 2e-51 201
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 53 3e-51 200
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 54 3e-51 200
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 53 7e-51 199
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 54 3e-50 197
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 44 4e-24 110
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 40 1e-23 108
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 38 2e-18 91.7
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 38 4e-18 90.5
Created Date 25-Jun-2016