WERAM Information

Tag Content
WERAM ID WERAM-Ocp-0062
Ensembl Protein ID ENSOPRP00000005561.1
Gene Name PRDM1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSOPRG00000006055.1 ENSOPRT00000006062.1 ENSOPRP00000005561.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 6.60e-42 142 50 165
Organism Ochotona princeps
Domain Profile
  HMT RIZ
               RIZ.txt   3 velaessipkeg.lgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNL 90 
                           + l+++++++++ +gv +k++i+kg++fGP++Ge++++++v +nan+k++w+i+ ++ge ++++D+ +eeksnW+ryvn A+s +eqNL
  ENSOPRP00000005561.1  50 NLLFKYATNSKEvTGVVSKEYIPKGTRFGPLIGEIYTNDTVPKNANRKYFWRIY-SRGELHHFIDGFNEEKSNWMRYVNPAHSAREQNL 137
                           56888888887769****************************************.9********************************* PP
               RIZ.txt  91 aalqineqifYktikdIepdeELLvwyk 118
                           aa+q++++++++tik+I++++ELLvwy+
  ENSOPRP00000005561.1 138 AACQNGMNVYFYTIKPIPANQELLVWYC 165
                           ***************************6 PP
Protein Sequence
(Fasta)		MKMDMEDADM SLWTEAEFEE KCTYIVNDHP WESGPDGGTP VQAEASLPRN LLFKYATNSK 60
EVTGVVSKEY IPKGTRFGPL IGEIYTNDTV PKNANRKYFW RIYSRGELHH FIDGFNEEKS 120
NWMRYVNPAH SAREQNLAAC QNGMNVYFYT IKPIPANQEL LVWYCRDFAG RLHYPYPGEL 180
TMMNLTQTQS SPKPLTEKGE LCPKSAKREH SVKEXXXXXX XXXXXXXXXX XXXXXXXXXX 240
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 300
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 360
XXXXXXXXXX XXXXXXXXXX XXNCGLSPMG NINGINNLGL FRRLYRVYGN FSPGGILSHP 420
MLNPVFLPSS LLSESRRLLQ PEHPGDVLFP APHSVFFLTG AVASVKDKTC SFTCGSPTAG 480
SAATSEHVVQ PKATSAVMAA PSSDQAMNLI KNKRNMTGYK TLPYPLKKQN GKIKYECNVC 540
AKTFGQLSNL KVHLRVHSGE RPFKCQTCNK GFTQLAHLQK HYLVHTGEKP HECQVCHKRF 600
SSTSNLKTHL RLHSGEKPYQ CKVCPAKFTQ FVHLKLHKRL HTRERPHKCA QCQKSYIHLC 660
SLKVHLKGNC LMAPASGLPL DDLTRINEEI EKFDISDNAD RLEDMEDNID VTSVVEKEIL 720
AMVRKEKEET DLKVSLQRNA GSGLLSSGCG LYESSDLSLL KLPHSNPLPL VPVKVKQESV 780
EPMDP 785
Nucleotide Sequence
(Fasta)		ATGAAAATGG ACATGGAGGA CGCGGACATG AGTCTGTGGA CAGAGGCAGA GTTTGAGGAG 60
AAGTGCACCT ACATTGTGAA TGATCACCCC TGGGAGTCGG GTCCCGATGG AGGGACCCCA 120
GTACAGGCCG AGGCATCCTT GCCCAGGAAC CTGCTGTTCA AGTACGCCAC CAACAGCAAA 180
GAGGTGACTG GAGTGGTGAG TAAGGAATAC ATCCCAAAGG GCACACGATT TGGACCCTTA 240
ATTGGAGAAA TCTACACCAA TGATACAGTT CCCAAGAATG CCAACAGGAA ATATTTTTGG 300
CGGATCTACT CCAGAGGGGA ACTTCACCAT TTCATTGATG GCTTTAACGA GGAGAAGAGC 360
AACTGGATGC GATACGTGAA TCCAGCACAT TCTGCCCGGG AGCAAAACCT GGCTGCGTGT 420
CAGAACGGCA TGAATGTGTA CTTCTACACC ATCAAGCCTA TCCCTGCCAA CCAGGAACTT 480
CTTGTGTGGT ATTGCCGGGA CTTTGCAGGA AGGCTTCACT ACCCTTATCC TGGAGAGCTG 540
ACAATGATGA ATCTCACACA AACACAGAGC AGCCCAAAGC CACTGACTGA GAAGGGTGAA 600
CTGTGCCCCA AGAGCGCCAA GAGAGAGCAC AGCGTGAAAG AAATNNNNNN NNNNNNNNNN 660
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 720
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 780
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 840
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 900
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 960
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1020
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1080
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1140
NNNNNNAATT GTGGCTTAAG CCCAATGGGA AATATCAATG GCATTAACAA CTTGGGCCTC 1200
TTCCGGAGGC TGTACCGGGT CTACGGCAAC TTCTCACCCG GGGGGATCCT GTCGCATCCC 1260
ATGCTCAATC CAGTTTTTCT CCCGAGTTCC CTGCTCTCTG AAAGCCGGAG ATTGCTGCAA 1320
CCCGAGCATC CCGGGGATGT GCTCTTTCCT GCCCCCCACA GTGTTTTTTT CCTGACCGGA 1380
GCAGTCGCCA GCGTCAAGGA CAAGACGTGC AGCTTTACCT GCGGGTCTCC CACAGCGGGC 1440
TCGGCCGCCA CGTCGGAACA CGTGGTACAA CCCAAAGCTA CCTCAGCAGT CATGGCGGCC 1500
CCCAGCAGCG ACCAGGCCAT GAATCTCATC AAGAACAAGA GGAACATGAC CGGCTACAAG 1560
ACGCTGCCCT ACCCGCTGAA GAAACAGAAC GGCAAGATCA AGTACGAGTG CAATGTGTGC 1620
GCCAAGACGT TCGGGCAGCT GTCAAATCTG AAGGTCCATC TGCGAGTGCA CAGCGGAGAG 1680
CGGCCTTTCA AATGCCAGAC GTGCAACAAG GGCTTCACCC AGCTTGCCCA CCTGCAGAAA 1740
CACTACCTGG TACACACGGG AGAAAAGCCG CACGAATGCC AGGTCTGTCA CAAGCGATTC 1800
AGCAGCACCA GCAATCTCAA GACGCACCTG CGCCTGCACT CAGGAGAGAA ACCCTACCAG 1860
TGCAAGGTGT GCCCTGCCAA GTTCACGCAG TTTGTGCATC TGAAGCTGCA CAAGCGCCTC 1920
CACACCCGGG AGCGGCCCCA CAAGTGTGCC CAGTGCCAGA AGAGCTACAT CCATCTCTGC 1980
AGCCTCAAGG TCCACCTCAA GGGCAACTGC CTCATGGCCC CGGCCAGCGG GCTGCCCCTG 2040
GATGACCTGA CTCGCATCAA CGAAGAAATC GAGAAGTTCG ACATCAGCGA CAACGCGGAC 2100
CGGCTTGAGG ACATGGAGGA CAACATTGAT GTGACCTCGG TGGTGGAGAA AGAAATTCTG 2160
GCCATGGTCA GAAAAGAGAA AGAAGAAACT GACCTGAAAG TGTCTTTGCA AAGAAATGCG 2220
GGGAGCGGAC TCCTGTCCTC AGGGTGTGGC CTTTATGAGT CATCAGACCT GTCCCTCCTC 2280
AAGTTGCCTC ACAGCAACCC ACTACCTCTG GTACCAGTAA AGGTCAAACA GGAATCGGTC 2340
GAACCAATGG ATCCTTAA 2359
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 87 0.0 647
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 88 0.0 641
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 86 0.0 636
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 86 0.0 636
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 85 4e-180 629
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 85 5e-180 629
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 85 9e-180 628
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 85 1e-179 627
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 85 1e-179 627
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 85 1e-179 627
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 85 2e-179 627
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 85 2e-179 626
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 85 3e-179 626
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 85 4e-179 625
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 85 5e-179 625
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 85 6e-179 625
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 86 1e-178 624
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 85 2e-178 624
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 84 1e-177 620
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 86 2e-175 613
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 82 6e-175 612
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 83 2e-173 607
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 88 7e-170 595
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 83 2e-169 593
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 79 1e-168 590
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 79 1e-167 587
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 87 2e-167 587
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 84 3e-167 586
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 78 3e-167 586
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 78 3e-167 586
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 78 4e-167 585
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 80 1e-165 581
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 79 2e-165 580
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 78 6e-164 575
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 85 6e-164 575
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 86 1e-163 574
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 78 1e-161 567
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 83 3e-159 560
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 82 1e-157 554
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 79 2e-157 553
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 82 8e-157 551
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 75 9e-147 518
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 73 1e-145 514
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 70 4e-139 493
WERAM-Leo-0172 ENSLOCP00000020417.1 Lepisosteus oculatus 66 5e-138 489
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 71 1e-131 468
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 91 9e-116 415
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 66 1e-114 411
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 63 4e-113 406
WERAM-Orn-0077 ENSONIP00000008446.1 Oreochromis niloticus 57 2e-109 394
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 83 2e-107 387
WERAM-Pof-0225 ENSPFOP00000018402.1 Poecilia formosa 52 4e-105 380
WERAM-Xim-0163 ENSXMAP00000013381.1 Xiphophorus maculatus 51 1e-103 375
WERAM-Tar-0004 ENSTRUP00000000947.1 Takifugu rubripes 61 4e-100 363
WERAM-Lac-0194 ENSLACP00000022113.1 Latimeria chalumnae 81 5e-86 316
WERAM-Ten-0146 ENSTNIP00000015268.1 Tetraodon nigroviridis 65 7e-84 309
WERAM-Gaa-0096 ENSGACP00000012338.1 Gasterosteus aculeatus 66 9e-84 309
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 56 4e-76 283
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 60 1e-52 205
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 39 8e-29 126
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 38 7e-24 110
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 37 3e-23 108
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 37 7e-18 90.5
Created Date 25-Jun-2016