WERAM Information

Tag Content
WERAM ID WERAM-Prc-0096
Ensembl Protein ID ENSPCAP00000008555.1
Gene Name PRDM1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPCAG00000009179.1 ENSPCAT00000009164.1 ENSPCAP00000008555.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 1.30e-41 141 51 165
Organism Procavia capensis
Domain Profile
  HMT RIZ
               RIZ.txt   4 elaessipkeg.lgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLa 91 
                            l+++++++++ +gv++k++i+kg++fGP++Ge++++++v +nan+k++w+i+  +ge ++++D+ +eeksnW+ryvn A s +eqNLa
  ENSPCAP00000008555.1  51 LLFKYTTNSKEvIGVMSKEYIPKGTRFGPLIGEIYTNDTVPKNANRKYFWRIY-FRGELHHFIDGYNEEKSNWMRYVNPAYSAREQNLA 138
                           577788877766*****************************************.9********************************** PP
               RIZ.txt  92 alqineqifYktikdIepdeELLvwyk 118
                           a+q++++i+++tik+I++++ELLvwy+
  ENSPCAP00000008555.1 139 ACQNGMNIYFYTIKPIPANQELLVWYC 165
                           **************************6 PP
Protein Sequence
(Fasta)		MKMDMEDADM TLWTEAEFEE KCTYIVNDHP WDSAIDGGSV LQAEASLPRN LLFKYTTNSK 60
EVIGVMSKEY IPKGTRFGPL IGEIYTNDTV PKNANRKYFW RIYFRGELHH FIDGYNEEKS 120
NWMRYVNPAY SAREQNLAAC QNGMNIYFYT IKPIPANQEL LVWYCRDFAE RLHYPYPGEL 180
TMMNLTQTQN NPKQPSTEKS ELCPKSAPKR EYSVKEILKL DSNTSKGRDL YHSNISPLTS 240
EKDVEDFRKN SSPEMPFYPR VVYPIRAPLP EDFLKVSLGY GMERPTYITH SPIPSSTTPS 300
PSARSSPDQS LKSSSPHSSP GNTRSPLAPG CHEQRDSYAY LNAPYSTEGL GSYPGYAPPP 360
HLPPAFIPSY NAHYPKFLLP SYGMNCNGLS AVSTINGINN FSLFPRLYPV YSNLLSGGSL 420
PHPMLNPASL PSSLPSEGAR RLLQPEHPRD VLVPAPHSAF SLTGAAASMK DKACSPTSGS 480
PTAGTAATSE HVVQPKATSA AMAAPSSDEA MNLIKSKRNM TGYKTLPYPL KKQNGKIKYE 540
CNVCAKTFGQ LSNLKXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXVC 600
HKRFSSTSNL KTHLRLHSGE KPYQCKVCPA KFTQFVHLKL HKRLHTRERP HKCAQCHKSY 660
IHLCSLKVHL KGNCPVAPTT SLPLEDLTRI NEEIEKFDIS DNADRLEDME DSVDVTLVVE 720
KEILATIRKE REDASLKVSL PRNLGNGLLS PGCPLYESSE PALMKLPHSH PLPLVPVKVK 780
QETVEPMDP 789
Nucleotide Sequence
(Fasta)		ATGAAAATGG ACATGGAGGA CGCAGATATG ACTCTGTGGA CAGAAGCCGA GTTTGAAGAG 60
AAGTGTACGT ACATTGTAAA TGACCATCCC TGGGATTCTG CCATCGATGG AGGGTCTGTC 120
CTTCAGGCAG AGGCATCCTT ACCAAGGAAT CTGCTTTTCA AATACACCAC CAACAGCAAA 180
GAGGTTATTG GAGTCATGAG TAAGGAATAC ATACCAAAGG GGACGCGTTT TGGACCACTG 240
ATAGGTGAAA TCTATACCAA TGATACCGTT CCCAAGAATG CAAACAGGAA GTATTTTTGG 300
CGGATCTATT TCAGGGGGGA GCTTCACCAC TTCATCGATG GCTATAATGA GGAGAAAAGC 360
AACTGGATGC GCTATGTGAA TCCTGCGTAT TCTGCCCGGG AGCAAAACCT GGCTGCATGT 420
CAGAACGGGA TGAACATCTA CTTCTACACC ATTAAGCCCA TTCCTGCCAA CCAGGAACTT 480
CTTGTGTGGT ATTGTCGGGA CTTTGCAGAG AGGCTTCACT ACCCTTATCC CGGAGAGCTG 540
ACAATGATGA ATCTCACACA AACACAGAAT AATCCAAAGC AACCGAGCAC TGAGAAAAGT 600
GAACTGTGCC CAAAAAGTGC CCCAAAGAGA GAGTACAGTG TGAAAGAAAT CCTAAAATTG 660
GACTCCAACA CCTCCAAAGG AAGGGACCTG TACCATTCCA ACATTTCACC CCTCACTTCA 720
GAAAAGGACG TGGAAGACTT CAGGAAAAAC AGTAGCCCCG AAATGCCCTT CTATCCTCGA 780
GTCGTCTACC CGATCCGGGC CCCGCTACCA GAAGACTTTT TGAAAGTATC CCTAGGCTAT 840
GGGATGGAGA GACCGACCTA CATCACTCAC TCGCCAATTC CATCCTCCAC AACTCCAAGT 900
CCCTCCGCAA GAAGCAGCCC TGACCAGAGC CTGAAAAGCT CCAGTCCTCA CAGCAGCCCG 960
GGGAATACTC GGTCCCCTCT GGCTCCTGGC TGTCACGAAC AGCGAGACTC CTATGCTTAC 1020
TTGAACGCAC CCTACAGCAC TGAAGGCTTG GGCTCTTACC CTGGATACGC GCCTCCCCCC 1080
CACCTGCCGC CGGCGTTCAT CCCTTCGTAC AACGCCCACT ACCCCAAGTT CCTTTTACCC 1140
TCCTACGGCA TGAACTGTAA TGGCCTGAGC GCTGTGAGTA CCATCAACGG CATCAACAAC 1200
TTCAGCCTCT TCCCGCGGTT GTACCCGGTC TACAGTAACC TCCTGAGTGG GGGCAGCCTG 1260
CCTCACCCCA TGCTCAACCC TGCTTCTCTC CCAAGCTCGC TGCCCTCAGA AGGAGCTCGG 1320
AGGTTGCTTC AACCCGAACA TCCCAGAGAC GTGCTTGTCC CAGCACCCCA CAGTGCCTTT 1380
TCCCTCACCG GGGCCGCCGC CAGCATGAAG GACAAGGCGT GTAGCCCCAC GAGTGGCTCT 1440
CCAACAGCAG GCACGGCCGC CACGTCCGAG CACGTGGTAC AACCCAAAGC TACCTCAGCA 1500
GCGATGGCAG CCCCCAGCAG CGACGAAGCC ATGAATCTCA TCAAGAGCAA AAGAAACATG 1560
ACTGGCTACA AGACGCTTCC CTATCCACTG AAAAAACAGA ATGGCAAGAT CAAGTATGAA 1620
TGCAATGTTT GTGCCAAGAC TTTTGGCCAG CTCTCCAATC TGAAGNNNNN NNNNNNNNNN 1680
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1740
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNGTCTGC 1800
CACAAACGAT TCAGCAGTAC CAGCAATCTC AAGACCCACC TGCGCCTCCA CTCAGGAGAG 1860
AAACCTTACC AATGCAAGGT GTGTCCTGCC AAGTTCACCC AGTTTGTGCA CCTGAAACTC 1920
CACAAGCGCC TACACACCCG GGAGCGGCCC CATAAGTGCG CCCAGTGCCA TAAAAGCTAC 1980
ATCCACCTCT GCAGCCTCAA GGTCCACCTG AAAGGAAACT GCCCTGTGGC CCCAACCACT 2040
AGCCTGCCCC TGGAGGACCT GACCCGCATC AACGAGGAGA TTGAGAAGTT TGACATCAGT 2100
GACAATGCTG ATCGGCTCGA GGACATGGAG GACAGCGTGG ATGTGACCTT GGTGGTGGAG 2160
AAGGAAATTC TGGCCACAAT CAGAAAGGAG AGGGAAGATG CTAGCCTCAA AGTTTCTTTG 2220
CCAAGAAACC TGGGGAATGG ACTTCTCTCC CCAGGGTGTC CCCTTTATGA ATCGTCGGAG 2280
CCGGCCCTCA TGAAGTTGCC TCACAGTCAC CCACTACCTC TGGTACCTGT AAAGGTCAAA 2340
CAAGAAACAG TTGAACCAAT GGATCCTTAA 2371
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 88 0.0 1202
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 85 0.0 1164
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 85 0.0 1164
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 85 0.0 1163
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 85 0.0 1162
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 85 0.0 1162
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 85 0.0 1162
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 85 0.0 1160
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 85 0.0 1156
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 85 0.0 1154
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 84 0.0 1150
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 84 0.0 1140
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 88 0.0 1130
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 83 0.0 1129
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 83 0.0 1123
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 83 0.0 1122
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 79 0.0 1117
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 82 0.0 1113
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 82 0.0 1110
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 80 0.0 1108
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 83 0.0 1107
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 81 0.0 1103
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 81 0.0 1100
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 82 0.0 1098
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 81 0.0 1097
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 80 0.0 1095
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 81 0.0 1089
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 82 0.0 1082
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 80 0.0 1068
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 74 0.0 1051
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 79 0.0 1048
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 77 0.0 1031
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 75 0.0 1028
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 76 0.0 1017
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 74 0.0 1016
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 75 0.0 1014
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 75 0.0 1013
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 75 0.0 1009
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 75 0.0 1004
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 74 0.0 997
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 72 0.0 962
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 71 0.0 919
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 66 0.0 847
WERAM-Leo-0172 ENSLOCP00000020417.1 Lepisosteus oculatus 61 0.0 782
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 78 2e-161 567
WERAM-Orn-0077 ENSONIP00000008446.1 Oreochromis niloticus 45 8e-160 561
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 89 3e-154 543
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 75 1e-142 504
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 82 4e-142 503
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 59 3e-92 337
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 59 7e-92 335
WERAM-Pof-0225 ENSPFOP00000018402.1 Poecilia formosa 56 7e-89 325
WERAM-Lac-0194 ENSLACP00000022113.1 Latimeria chalumnae 81 8e-86 315
WERAM-Tar-0004 ENSTRUP00000000947.1 Takifugu rubripes 57 8e-86 315
WERAM-Xim-0163 ENSXMAP00000013381.1 Xiphophorus maculatus 58 3e-85 313
WERAM-Gaa-0096 ENSGACP00000012338.1 Gasterosteus aculeatus 49 2e-65 248
WERAM-Ten-0146 ENSTNIP00000015268.1 Tetraodon nigroviridis 46 3e-65 247
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 60 2e-57 221
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 53 6e-51 200
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 37 2e-19 95.5
WERAM-Tut-0059 ENSTTRP00000004738.1 Tursiops truncatus 38 5e-17 87.4
WERAM-Mim-0073 ENSMICP00000007053.1 Microcebus murinus 32 3e-16 85.1
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 33 1e-14 79.7
Created Date 25-Jun-2016