WERAM Information

Tag Content
WERAM ID WERAM-Ran-0003
Ensembl Protein ID ENSRNOP00000040939.3
Gene Name Prdm1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000000323.7 ENSRNOT00000048270.5 ENSRNOP00000040939.3
ENSRNOG00000000323.7 ENSRNOT00000076541.1 ENSRNOP00000068267.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 3.20e-41 140.6 95 201
Organism Rattus norvegicus
Domain Profile
  HMT RIZ
               RIZ.txt  11 pkeglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLaalqineqi 99 
                            ke +gv +k++i+kg++fGP++Ge++++++v +nan+k++w+i+ +++e ++++D+ +eeksnW+ryvn A+s +eqNLaa+q++++i
  ENSRNOP00000040939.3  95 SKEVIGVVSKEYIPKGTRFGPLIGEVYTNDTVPKNANRKYFWRIY-SREEFHHFIDGFNEEKSNWMRYVNPAHSAREQNLAACQNGMNI 182
                           2455*****************************************.99999999*********************************** PP
               RIZ.txt 100 fYktikdIepdeELLvwyk 118
                           +++tik+I++++ELLvwy+
  ENSRNOP00000040939.3 183 YFYTIKPIPANQELLVWYC 201
                           ******************6 PP
Protein Sequence
(Fasta)		MLDLLLEKRV GTTLAAPKCN SGSVKFQGLA ETSGIMKMDM EDADMTLWTE AEFEEKCTYI 60
VNDHPWDSSA DGGTSVQAEA SLPRNLLFKY AANNSKEVIG VVSKEYIPKG TRFGPLIGEV 120
YTNDTVPKNA NRKYFWRIYS REEFHHFIDG FNEEKSNWMR YVNPAHSARE QNLAACQNGM 180
NIYFYTIKPI PANQELLVWY CRDFAERLHY PYPGELTVMN LTQTESNPKQ YSSEKNELYP 240
KSVPKREYSV KEILKLDSNP SKRKDSYRSN ISPYTSEKDM DGFRKNGSPD MPFYPRVVYP 300
IRAPLPEDFL KASLAYGMER PTYITHSPLP SSTTPSPPAS SSPEQSLKSA SPHGSPGNTV 360
SPVVPGPPEH RDSYSYLNVS YGSEGLGSYP GYAPAPHLPP AFIPSYNAHY PKFLLPPYGI 420
SSNGLSTMNN INGINNFSLF PRLYPVYSNL LSGGNLPHPM LNPASLPSSL PTDGARRLLP 480
PEHPREVLVP APHSAFSLTG AAASMKDESS PPSGSPTAGT AATSEHVVQP KATSSVMAAP 540
STDGAMNLIK NKRNMTGYKT LPYPLKKQNG KIKYECNVCA KTFGQLSNLK VHLRVHSGER 600
PFKCQTCNKG FTQLAHLQKH YLVHTGEKPH ECQVCHKRFS STSNLKTHLR LHSGEKPYQC 660
KVCPAKFTQF VHLKLHKRLH TRDRPHKCAQ CHKSYIHLCS LKVHLKGNCP VVPAPGLPLE 720
DLTRINEEIE RFDLSDNADR LEDMEDSVDV TSMVEKEILA IVRKEKEETG LKMSLQKTMG 780
SRLPSSGCSL YESSDLSLMK LPHSNSLPLV PVKVKQETVE PMDP 824
Nucleotide Sequence
(Fasta)		GGAAGAGCAG TCAGTCGCTC GCCAGCACAG ACACTGCTGC CGTGACACTC GGCCCTCCAG 60
TGTCGCCGAG ACGCAAGAGC AGCGCGCAGC ACCTGTCCGC CCGGAGCGAG CCCGGCCCGC 120
GGCCGTAGAA AAGGAGGGAC CGCCGAGGTG CGCGTCAGTA CAGCTCAGCC CGGCAGGGAC 180
GCGGGAGGAT GTGGACTGGG TGGACATGAG CGAGGCTTAT CTCAGATGTT GGATCTTCTC 240
TTGGAAAAGC GTGTGGGTAC GACCTTGGCT GCCCCCAAGT GTAACTCCGG TTCCGTGAAG 300
TTTCAAGGAT TGGCAGAGAC GTCTGGGATC ATGAAAATGG ACATGGAGGA CGCGGATATG 360
ACTCTGTGGA CAGAGGCCGA GTTTGAAGAG AAGTGTACGT ACATAGTGAA CGACCACCCC 420
TGGGATTCCA GCGCCGACGG GGGTACTTCT GTTCAAGCCG AGGCATCCTT ACCAAGGAAC 480
CTGCTCTTCA AGTATGCCGC CAACAACAGC AAAGAGGTTA TTGGTGTGGT GAGTAAGGAA 540
TACATCCCAA AGGGAACGAG GTTCGGACCC CTGATCGGCG AAGTCTACAC CAACGACACG 600
GTTCCCAAGA ATGCCAACAG GAAATATTTT TGGCGGATCT ATTCCAGAGA GGAGTTCCAC 660
CACTTCATCG ACGGCTTTAA CGAGGAGAAA AGCAACTGGA TGCGATACGT GAATCCAGCT 720
CACTCTGCCC GGGAGCAGAA CCTGGCCGCC TGCCAGAACG GAATGAACAT CTATTTCTAC 780
ACTATTAAGC CTATCCCTGC CAACCAGGAA CTTCTTGTGT GGTATTGCCG GGACTTTGCG 840
GAGAGGCTCC ACTACCCTTA TCCTGGAGAG CTCACAGTGA TGAATCTCAC ACAAACAGAA 900
AGCAACCCAA AGCAATACAG CAGTGAGAAA AATGAACTCT ACCCAAAGAG TGTCCCCAAG 960
AGAGAGTACA GCGTGAAAGA AATCCTCAAA CTGGACTCCA ATCCCTCCAA AAGGAAGGAC 1020
AGCTACCGTT CCAACATTTC ACCCTACACT TCAGAAAAAG ACATGGATGG CTTTCGGAAA 1080
AATGGGAGCC CGGACATGCC CTTCTACCCT CGGGTTGTGT ATCCCATCCG GGCACCTCTG 1140
CCAGAAGACT TTTTGAAGGC GTCCCTGGCC TATGGGATGG AGAGACCCAC CTACATCACT 1200
CACAGCCCCC TTCCGTCTTC CACAACTCCA AGTCCCCCTG CAAGCAGTAG CCCAGAGCAG 1260
AGCCTCAAGA GCGCCAGCCC CCACGGCAGC CCGGGGAACA CGGTGTCACC CGTGGTGCCA 1320
GGCCCCCCAG AGCACCGGGA CTCCTACTCC TACTTGAATG TTTCCTATGG TTCTGAGGGC 1380
CTGGGCTCCT ACCCTGGCTA TGCCCCTGCC CCGCATCTCC CGCCGGCTTT CATCCCCTCC 1440
TACAATGCTC ACTACCCCAA GTTCCTGTTG CCACCCTACG GCATCAGCTC CAATGGCTTG 1500
AGCACTATGA ACAATATCAA TGGTATCAAC AACTTCAGCC TATTCCCCAG GTTGTATCCT 1560
GTCTACAGTA ACCTCCTCAG TGGGGGCAAC CTGCCTCACC CCATGCTCAA CCCAGCTTCC 1620
CTACCGAGTT CCCTGCCTAC CGATGGAGCC CGGAGGCTGC TCCCACCGGA GCACCCCAGA 1680
GAGGTGCTTG TCCCGGCGCC CCACAGTGCC TTCTCCCTTA CTGGGGCTGC AGCCAGCATG 1740
AAGGACGAGA GTAGCCCCCC CAGCGGGTCT CCAACGGCGG GAACTGCGGC CACGTCGGAA 1800
CACGTGGTAC AACCCAAAGC TACCTCATCG GTGATGGCAG CCCCCAGCAC TGACGGAGCC 1860
ATGAATCTCA TTAAGAACAA AAGAAACATG ACTGGTTACA AGACCCTTCC TTACCCGCTG 1920
AAGAAGCAGA ACGGCAAGAT CAAGTATGAG TGCAATGTCT GTGCCAAGAC GTTTGGTCAG 1980
CTCTCAAACC TGAAGGTCCA CCTGAGAGTG CACAGTGGAG AACGGCCTTT CAAATGCCAG 2040
ACCTGCAACA AGGGCTTTAC TCAGCTCGCC CACCTGCAGA AACACTACCT GGTACACACG 2100
GGAGAAAAGC CACATGAATG CCAGGTCTGC CACAAGAGAT TTAGTAGCAC AAGCAATCTC 2160
AAGACACACC TTCGACTGCA TTCTGGAGAA AAACCTTACC AGTGTAAGGT GTGCCCTGCC 2220
AAGTTTACAC AGTTCGTGCA CCTGAAGCTG CACAAGCGAC TGCACACCCG GGATCGGCCT 2280
CACAAGTGTG CCCAGTGCCA TAAGAGCTAC ATCCATCTCT GTAGCCTCAA GGTCCACCTG 2340
AAGGGCAACT GCCCTGTGGT CCCAGCCCCC GGGCTGCCCT TGGAGGACCT GACCCGGATC 2400
AATGAAGAAA TCGAGAGGTT CGACCTTAGC GACAACGCTG ACCGTCTTGA GGACATGGAG 2460
GACAGCGTCG ATGTGACCTC CATGGTGGAG AAGGAGATTC TAGCCATAGT CAGGAAAGAG 2520
AAAGAAGAAA CTGGTCTGAA AATGTCTTTG CAAAAAACCA TGGGGAGCAG ACTCCCCTCC 2580
TCAGGGTGCA GCCTCTACGA GTCATCAGAC CTGTCCCTCA TGAAGTTGCC TCACAGCAAC 2640
TCACTACCTC TGGTGCCTGT AAAGGTCAAA CAAGAAACAG TTGAACCGAT GGATCCTTAA 2700
GATTTTCAGA AAACAAGTGT TTTCGTTTTT GCTCCTTAGG GTATGGCTTG GCGGGTCAGA 2760
CTGCCTGTAG CAATTGCTTG TACGCGATTC CAGATCCGCA AAGCTCTACT GGCATCGGGT 2820
GGTTCCCCGA ACCTCTCTGG AATTAAAGAA GGACTCCAAT GTTACCAAAA TCTCAGGGCA 2880
TAAATTGAGG CAAAGACTCA CTATATATAC ATATATACAT ATTATATATA TATATATATT 2940
ATACTTATTT ACAACCATGT CTATATATTT GAACCTGTGT ATTTTGAATA TTTGTGTGAA 3000
TATGTTTGCA TAGCCTTCCT ACTACTAAAG CTATTGCCTA GCCATAATTA TTTTTTCAAT 3060
GATAATCCTT CATAATTTAT TATACAGTTT ATCTTTCAAG AGGAAGCAAT AATTAAAGAA 3120
GTTTACAATG ACTGGAAAGA TTCTTTGTAA TTTGAGTATA AATGTTGTAT CCCTGTCCGG 3180
TGGCCATTCT TTGTAGATAA TTTCTGCACA TCTGTTTAAA GGCCTGAGGC TCAGAAGATA 3240
GTTCTGTGTT TTTGGGGCAA AACTTTCTCT ATGATGATGC TTTAAAAAAA AAATGAGGTT 3300
TTGATTATTG CCAAAGTCAT GTGGTTGGTG CGTTGACTCA GAAGATCACA TCATCTGAGT 3360
GACATTGTAC ACGTCGGGGA TATGTGTGCA GAATTGCTCA GCAATGATTT GAGGGGAAGG 3420
GAGAAGAAAT ATTTTATGTT TCTGATGACC GCTGGTTTTC CTCTTCCCAC TCACAATTTT 3480
ACCAATGGCG ACAGGAAGGC TTTACCGACC TGTCTCTCCA AAACCGTAGG GTCTTCCTGT 3540
CTCCAATGTC ACATGACCAT TCTGAGTGGC CATTGGACTT CGGCATCCCC ATATGTTAAA 3600
TGAAAATGTG AAGAAGATAA GAAGTCGTAC GTGTTCAGAA GATCTGTCTT AAAGCACAGA 3660
TGTTTGTGTG TGTGTGTGAG GGGTTGGGGC CTTGAGTCTG GCTGTCGTTT TGCTGTTGGC 3720
TTGTTTTTGT TTTTGTTTTT AGTGTCAAAA TTGCACAAAG CCGGTGCCCT ACTAAGAAGG 3780
ATTTGATGTA GAAAGGCTCA GGCCACACTT AAAATACAAT CAAGCAAAGA GAACAGAAAG 3840
AATAAACATA AAAACGGGTA TCACTCTTAG CCTTTTAAGT TAAGCGGGTA ATGAGCATCC 3900
CTGTCCCCAA CACATCAATT GTATTTTATC TGTAAAACTC AGTTTTTCTC AGTATTTGTG 3960
CTTCATTGTT TTTTTCTTTT TTGCATTGTA TAATTAACTT AATTGAAGAC GAAAGGGCAT 4020
TGCAAAGGTG TTCAACAATT ACCTCATTGA GTGTATCCAG TAGGAGTGCA GGAAGTGATG 4080
TCGTATCTCA TAAGTCATTT GCTACCTGGC TGAGCACGTG TGCTCGCAAA CGGTAGGCTG 4140
GGTGGGTCTG TCCTGTATTC TCCTAAGCCC AAAGGTTACC TGTCGGTGTT CAAGGTGTAA 4200
TAAAGAAAGC TGTATATTTA TGAACCTATT TATACCACTA TACCGTGTGT ATATATGATA 4260
TATTTATAAC CACTTAAATT GTGAGCCAAG CCATGTAAAC GAACCTATAT TTCCTAAGAG 4320
CAAAAACAAT CTCTCTGAAG CTCTGCTTAA AAACTCCATG ACCTCACTAT CTTATCCCAC 4380
TGGTGCTTGG GCACCACCCT GCCTACTACC AGAGACCAGA GCACCTCAGT GCAGAGGCAA 4440
GGGCCGTGTA GCATCTAGGG AAGAATAGAA ACATCTCATC ATGCATTTGA TCATCTTGCT 4500
ACTTTTGTGC CAGTTGGGGG TCACAAAATA ACCATTTTCC TACTTCTGCT CTATTCTTCC 4560
TCTCCCTCTT CCAGAACCTT GTCACAGGCT CATTCTCCAC TCTGATGCTT ACCTTAGCGT 4620
TTTGTAAACC CAAGAGCCTT ACTGACCTGT TGCTGTGACT AACAAGATGG GTTTCTCCTT 4680
ACCTACAAAG GATCAGAGCC AGAGATTCCA CGCACGCCAG CAAGCAAGCT CTCACTGAGC 4740
TGCGGCCCTA TCAAGACTGG TATCTCTGGA TGTACCTGTG TTTGAGGGAA ATAATCTTTA 4800
GTTGTAGGTT AACCAAAGCA TGACAATGAC ACCAAATATG TTTCCTTCCC AGTGAACTCG 4860
GGTTGCTTTC CTCCTGTGTT CCCTTGTGTT GAGAGGATTT TTACAAGGAC GACGACCGCT 4920
TTCTTGCCAT CCGTTTTCCT CTTAGCCCTC CTACATGTGA GTGTTGAGCT CACAATTAAC 4980
AGTGGTTTGT TTGTTATGTT TGTTTGGTTT TTTTTTTTTT TTCCTCAGAG TTAAAACTGA 5040
CCAAAGTTAT TGGCTTTTTA CTTTGCTAGA ACAACAAACT ATCTTATGTT TACGTACTGG 5100
TTTACATTGT TATTTATGTG CAAATTGTCA AGATGTAAAT TAAAATATAA ACGTTCATGC 5160
TTTACC 5167
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 96 0.0 1523
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 89 0.0 1452
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 88 0.0 1434
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 88 0.0 1434
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 88 0.0 1433
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 88 0.0 1432
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 88 0.0 1432
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 87 0.0 1429
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 87 0.0 1426
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 87 0.0 1426
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 88 0.0 1423
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 87 0.0 1405
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 86 0.0 1398
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 87 0.0 1395
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 86 0.0 1389
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 85 0.0 1370
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 87 0.0 1370
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 86 0.0 1367
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 87 0.0 1364
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 85 0.0 1357
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 87 0.0 1345
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 86 0.0 1342
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 85 0.0 1334
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 84 0.0 1333
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 83 0.0 1315
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 83 0.0 1314
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 79 0.0 1283
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 84 0.0 1274
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 80 0.0 1263
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 79 0.0 1257
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 77 0.0 1254
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 78 0.0 1238
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 77 0.0 1235
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 77 0.0 1234
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 77 0.0 1229
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 77 0.0 1221
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 76 0.0 1216
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 75 0.0 1175
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 75 0.0 1172
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 74 0.0 1152
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 71 0.0 1134
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 74 0.0 1098
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 68 0.0 987
WERAM-Leo-0172 ENSLOCP00000020417.1 Lepisosteus oculatus 66 0.0 981
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 52 0.0 753
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 54 0.0 744
WERAM-Orn-0077 ENSONIP00000008446.1 Oreochromis niloticus 50 0.0 717
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 84 0.0 713
WERAM-Pof-0225 ENSPFOP00000018402.1 Poecilia formosa 49 0.0 706
WERAM-Xim-0163 ENSXMAP00000013381.1 Xiphophorus maculatus 50 0.0 690
WERAM-Tar-0004 ENSTRUP00000000947.1 Takifugu rubripes 50 0.0 687
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 84 0.0 670
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 88 2e-161 566
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 83 1e-152 537
WERAM-Gaa-0096 ENSGACP00000012338.1 Gasterosteus aculeatus 45 3e-151 533
WERAM-Lac-0165 ENSLACP00000019582.1 Latimeria chalumnae 44 6e-145 512
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 43 1e-133 474
WERAM-Ten-0146 ENSTNIP00000015268.1 Tetraodon nigroviridis 72 2e-85 314
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 60 4e-53 207
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 39 1e-28 125
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 37 4e-23 107
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 37 2e-22 105
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 38 5e-19 94.0
Created Date 25-Jun-2016