WERAM Information

Tag Content
WERAM ID WERAM-Gaa-0096
Ensembl Protein ID ENSGACP00000012338.1
Gene Name prdm1c
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGACG00000009358.1 ENSGACT00000012362.1 ENSGACP00000012338.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 1.70e-35 122.1 94 198
Organism Gasterosteus aculeatus
Domain Profile
  HMT RIZ
               RIZ.txt  13 eglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLaalqineqifY 101
                           e lgv +k+ i+kg++fGP+vGe +++e++ + +++k++w+++ ++g  ++i+D+ +ee+snW+ryvn A+s+e qNL a+q + +i++
  ENSGACP00000012338.1  94 EVLGVNSKELIPKGTRFGPLVGESYTNETILKDKDRKYFWRVF-SEGFLHHILDGLNEERSNWMRYVNPACSEEGQNLIACQSGLEIYF 181
                           569****************************************.9******************************************** PP
               RIZ.txt 102 ktikdIepdeELLvwyk 118
                           +tik+++p++ELLvwy+
  ENSGACP00000012338.1 182 YTIKPLQPGQELLVWYC 198
                           ****************6 PP
Protein Sequence
(Fasta)		MCGSSQGFTA PSQCTKAMLT SESSLHSTGS LQHAMPETQD ADMTSWSETT FEKRCTYIVK 60
DQLLEELPEN NCKTRAERSL PRNLALKRCP GSAEVLGVNS KELIPKGTRF GPLVGESYTN 120
ETILKDKDRK YFWRVFSEGF LHHILDGLNE ERSNWMRYVN PACSEEGQNL IACQSGLEIY 180
FYTIKPLQPG QELLVWYCRE FALRCNYPPL DQLAIDNIVM CPTIDSRALG KTTGKRGHSV 240
SEILRDEPSK SRPRRLDRPF SQTNVPAVFP LCPRVVYPNQ PQSDSIHGHR YASLPPLLSG 300
SPPDSRADTR SVLRGPVPSS LHFPIQPSQC PVVAKPYQEP SAHDRGPPAL RPSPYLLPHY 360
SLGLNSNLPH SYPCYGDGLK PDLTLSSHLL PFDGYSHFLH PLPNRHKADL TIPATSSASS 420
VVPSMRKALP SSSPLDAFRD CLPSKPPSAT ESNTEDAMDL RKIKRGGHIV GYKNLSYPLS 480
RQNGKIRYEC NVCEKVFGQL SNLKVHLRVH SGERPFKCQT CSKNFTQLAH LQKHYLVHTG 540
EKPHECKVCL KRFSSTSNLK THQRLHSGER PYQCKLCPAR FTQFVHLKLH KRLHTGERPH 600
RCPCCPCAYL HHCSLRVHLQ GFCPLSPSAS RRHSPEELQQ VNAEIERFDM SEAAEQLEFM 660
AADAEMEKGD VTDLIKK 677
Nucleotide Sequence
(Fasta)		ATGTGTGGCT CCTCTCAAGG CTTCACAGCC CCGTCCCAGT GCACCAAAGC CATGTTGACC 60
TCAGAAAGTT CACTGCACAG CACAGGGTCA CTGCAGCATG CGATGCCCGA GACACAGGAT 120
GCAGACATGA CATCATGGAG CGAGACAACA TTTGAGAAGA GGTGCACTTA CATCGTGAAG 180
GACCAACTTC TGGAGGAACT GCCCGAAAAC AATTGCAAGA CACGCGCTGA GAGATCCTTA 240
CCCAGAAACC TGGCCCTGAA ACGCTGCCCC GGCTCTGCAG AGGTGCTCGG GGTGAACAGC 300
AAAGAGCTGA TTCCTAAGGG AACACGTTTT GGCCCTCTGG TGGGGGAAAG CTACACTAAC 360
GAAACAATTC TGAAAGATAA AGACAGGAAG TACTTCTGGA GGGTCTTCTC TGAGGGGTTT 420
TTGCACCACA TCCTGGATGG TTTGAACGAG GAGAGGAGCA ACTGGATGCG TTACGTCAAC 480
CCTGCCTGTT CTGAAGAGGG GCAAAACCTG ATCGCCTGCC AGAGCGGTTT GGAAATCTAC 540
TTCTACACAA TCAAACCACT TCAGCCGGGC CAGGAGCTTC TGGTGTGGTA CTGCCGCGAA 600
TTTGCCCTGC GCTGCAACTA CCCTCCTCTG GACCAACTGG CCATTGACAA CATTGTTATG 660
TGTCCCACAA TAGACAGTCG AGCACTGGGG AAGACAACAG GGAAACGGGG ACACAGCGTC 720
TCTGAAATCC TCAGAGACGA ACCTTCCAAA TCCCGCCCCA GACGTCTGGA TAGACCCTTC 780
TCTCAGACCA ACGTCCCAGC AGTTTTTCCC CTGTGTCCCC GTGTTGTGTA CCCGAACCAG 840
CCCCAGTCAG ATTCCATCCA TGGCCATAGA TATGCAAGTT TACCACCTCT GCTATCCGGC 900
AGCCCTCCCG ATAGCAGAGC TGACACAAGA TCAGTTCTAA GAGGTCCTGT TCCCTCCAGT 960
TTGCACTTCC CCATACAGCC CAGTCAATGC CCCGTTGTAG CCAAACCGTA CCAAGAGCCT 1020
TCTGCGCATG ATCGAGGCCC TCCTGCTCTG AGGCCTTCAC CCTATCTGCT GCCTCACTAC 1080
TCCCTCGGCC TCAACAGCAA TCTACCTCAC TCATACCCGT GCTACGGAGA CGGACTGAAA 1140
CCTGACTTAA CACTCTCATC TCATTTGCTG CCTTTTGACG GGTACTCACA CTTCCTTCAT 1200
CCTCTGCCCA ACAGACACAA AGCAGACCTG ACAATACCGG CCACATCCAG TGCCTCATCC 1260
GTGGTCCCCT CAATGCGCAA AGCACTGCCT TCTAGTTCGC CTCTGGATGC CTTTAGAGAC 1320
TGCCTTCCCT CCAAACCACC CTCTGCCACT GAGAGCAACA CTGAGGATGC AATGGACCTC 1380
AGGAAGATCA AACGAGGTGG GCACATTGTG GGCTACAAGA ACTTGTCTTA CCCACTCAGC 1440
AGACAGAATG GAAAGATCCG GTATGAGTGC AACGTCTGTG AAAAGGTCTT TGGGCAGCTG 1500
TCCAACCTCA AGGTCCATCT GAGAGTGCAC AGTGGAGAGC GTCCCTTCAA GTGTCAGACC 1560
TGCAGTAAGA ACTTTACTCA GTTGGCCCAC CTGCAGAAAC ATTACCTGGT TCACACTGGA 1620
GAGAAGCCCC ACGAGTGCAA GGTGTGCCTA AAGCGATTCA GTAGCACCAG TAACTTAAAG 1680
ACACACCAGC GGCTACACTC AGGTGAGAGG CCTTACCAGT GCAAGCTGTG CCCCGCCCGC 1740
TTCACGCAAT TCGTCCACCT CAAGCTCCAC AAACGCCTCC ACACAGGAGA ACGACCTCAC 1800
AGGTGTCCCT GCTGCCCTTG TGCCTATCTC CACCACTGCA GCCTCCGGGT GCACCTCCAA 1860
GGCTTCTGTC CTCTCTCCCC CTCGGCCTCC CGCAGACACT CGCCGGAGGA GCTACAGCAG 1920
GTCAACGCTG AGATTGAGAG GTTTGACATG AGCGAGGCGG CGGAGCAGCT CGAGTTCATG 1980
GCCGCAGACG CCGAGATGGA AAAGGGGGAC GTGACCGACT TAATAAAGAA G 2032
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0181 ENSONIP00000018515.1 Oreochromis niloticus 65 0.0 868
WERAM-Xim-0034 ENSXMAP00000003426.1 Xiphophorus maculatus 60 0.0 822
WERAM-Tar-0096 ENSTRUP00000019508.1 Takifugu rubripes 66 0.0 811
WERAM-Pof-0234 ENSPFOP00000019495.1 Poecilia formosa 60 0.0 800
WERAM-Ten-0146 ENSTNIP00000015268.1 Tetraodon nigroviridis 64 0.0 797
WERAM-Leo-0172 ENSLOCP00000020417.1 Lepisosteus oculatus 47 3e-167 586
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 49 4e-166 582
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 47 3e-158 556
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 46 2e-156 550
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 46 3e-154 542
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 52 1e-87 322
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 69 2e-87 320
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 68 9e-87 318
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 54 1e-86 318
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 66 1e-86 318
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 67 1e-86 318
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 50 1e-86 318
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 51 2e-86 318
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 68 2e-86 317
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 68 3e-86 317
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 54 3e-86 317
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 54 3e-86 317
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 54 3e-86 317
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 68 4e-86 316
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 51 4e-86 316
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 54 5e-86 316
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 68 5e-86 316
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 66 7e-86 315
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 67 1e-85 315
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 68 1e-85 315
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 67 1e-85 314
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 67 2e-85 314
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 52 3e-85 313
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 70 5e-85 313
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 53 5e-85 313
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 62 5e-85 313
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 67 5e-85 313
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 66 3e-84 310
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 64 6e-84 309
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 69 7e-84 309
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 66 7e-84 309
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 71 8e-84 308
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 69 1e-83 308
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 68 3e-83 306
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 68 5e-83 306
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 68 6e-83 306
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 68 7e-83 306
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 68 7e-83 305
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 68 7e-83 305
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 68 7e-83 305
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 68 8e-83 305
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 60 4e-68 257
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 49 1e-65 248
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 48 7e-65 246
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 48 3e-63 241
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 48 9e-63 239
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 50 2e-62 238
WERAM-Lac-0194 ENSLACP00000022113.1 Latimeria chalumnae 63 3e-62 237
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 61 2e-51 201
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 43 6e-27 120
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 37 4e-21 100
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 41 5e-21 100
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 38 2e-17 88.2
Created Date 25-Jun-2016