WERAM Information

Tag Content
WERAM ID WERAM-Mim-0047
Ensembl Protein ID ENSMICP00000004601.1
Gene Name PRDM9
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMICG00000005048.1 ENSMICT00000005046.1 ENSMICP00000004601.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 3.00e-39 133.4 40 159
Organism Microcebus murinus
Domain Profile
  HMT RIZ
               RIZ.txt   3 velaessipkeglgvya.kkkiekgekfGPfvGekkileeveenanekliweise.......dkgevkyivDasdeeksnWlryvnvAr 83 
                           +++++s ip++glgv++ +++++ g +fGP++G++   +e+ee+an++++w++++        +++++y vD++d++++nW+ryvn+Ar
  ENSMICP00000004601.1  40 LKIRPSGIPQAGLGVWNeASELPLGLHFGPYEGQV---TEDEEAANSGYSWLVRSaylfpcsGRNCYEY-VDGKDDSWANWMRYVNCAR 124
                           7899*************999**************9...99999*********98522222226999999.******************* PP
               RIZ.txt  84 skeeqNLaalqineqifYktikdIepdeELLvwyk 118
                           ++eeqNL+a+q+++qifY+t++ I+p++ELLvwy+
  ENSMICP00000004601.1 125 DEEEQNLVAFQYHRQIFYRTCQVIRPGCELLVWYG 159
                           **********************************6 PP
Protein Sequence
(Fasta)		KCQNFFIDSC AAHGPPTFVK DSAVDKGHPN RSALSLPPGL KIRPSGIPQA GLGVWNEASE 60
LPLGLHFGPY EGQVTEDEEA ANSGYSWLVR SAYLFPCSGR NCYEYVDGKD DSWANWMRYV 120
NCARDEEEQN LVAFQYHRQI FYRTCQVIRP GCELLVWYGD EYGQELGIKW GSKWKEELTI 180
RQEPKPEIHP CPSCSLAFSS QKFLSQHVKH THSSQISPRT SGRKHLQPEN PCPGDQNQEQ 240
QHSDPHSCND KAKDQEVKER PKPFHKKTQQ RGISRAFSSP PKGKMGSCRE GKRIMEEEPR 300
TGQKVGPGDT DKLCAAGGIS RISRVKYGDS GQSFSDKSNV IIHQRTHTGE KPYVCRECGR 360
GFSQKSDLLK HQRTHTGEKP YVCRECGRGF SQKSHLLRHQ RTHTGEKPYV CRECGRGFSQ 420
KSDLLIHQRT HTGEKPYVCR ECGRGFSCKS HLLIHQRTHT GEKPYVCREC GRGFSCKSSL 480
LIHQRTHTGE KPYVCRECGR GFSRKSDLLI HQRTHTGEKP CVCRKGE 527
Nucleotide Sequence
(Fasta)		AAGTGTCAGA ACTTCTTCAT AGACAGCTGT GCTGCTCATG GGCCCCCTAC ATTTGTAAAG 60
GACAGTGCAG TGGACAAGGG GCATCCCAAC CGCTCAGCCC TCAGCCTGCC CCCTGGGCTG 120
AAAATCAGAC CATCAGGCAT CCCTCAGGCT GGGCTTGGAG TATGGAATGA GGCATCCGAA 180
CTGCCACTAG GTCTGCACTT CGGCCCGTAT GAGGGCCAGG TCACAGAAGA CGAAGAGGCA 240
GCCAACAGTG GATACTCCTG GCTGGTGAGA AGTGCCTACC TTTTCCCCTG TTCTGGGAGA 300
AACTGCTATG AGTATGTAGA TGGAAAGGAC GACTCTTGGG CCAACTGGAT GAGGTATGTG 360
AACTGTGCCC GGGATGAGGA GGAGCAGAAC CTGGTGGCCT TCCAATACCA CAGGCAGATC 420
TTCTATCGGA CCTGCCAGGT CATCAGGCCA GGCTGTGAAC TGCTGGTCTG GTACGGGGAT 480
GAGTATGGCC AGGAGCTGGG CATCAAGTGG GGCAGCAAGT GGAAGGAAGA GCTCACCATA 540
AGGCAAGAAC CAAAGCCAGA AATCCATCCG TGTCCCTCAT GCTCTCTGGC CTTCTCCAGT 600
CAGAAATTCC TCAGTCAACA TGTAAAACAC ACCCACTCCT CTCAGATCTC TCCAAGAACA 660
TCTGGAAGAA AACACCTCCA ACCAGAGAAT CCCTGCCCAG GGGATCAGAA TCAGGAGCAG 720
CAACACTCTG ATCCACACAG CTGCAATGAC AAAGCCAAAG ATCAAGAAGT CAAAGAAAGG 780
CCCAAACCCT TTCATAAAAA GACACAGCAG AGGGGAATTT CAAGGGCATT TTCCAGCCCA 840
CCCAAAGGAA AAATGGGGAG CTGCAGGGAG GGTAAAAGAA TAATGGAGGA AGAGCCCAGA 900
ACAGGCCAGA AAGTGGGTCC AGGGGACACA GACAAATTAT GTGCGGCAGG AGGAATCTCA 960
AGAATTTCAA GAGTCAAGTA TGGAGACAGT GGGCAAAGCT TCAGTGATAA GTCAAATGTC 1020
ATCATACACC AGAGGACACA CACAGGGGAG AAGCCCTATG TCTGCAGGGA GTGTGGGCGA 1080
GGCTTTAGCC AAAAGTCAGA CCTCCTCAAA CACCAGAGGA CACACACAGG GGAGAAGCCC 1140
TATGTCTGCA GGGAGTGTGG GCGAGGCTTT AGCCAAAAGT CACACCTCCT CAGACACCAG 1200
AGGACACACA CAGGGGAGAA GCCCTATGTC TGCAGGGAGT GTGGGCGAGG CTTTAGCCAA 1260
AAGTCAGACC TCCTCATACA CCAGAGGACA CACACAGGGG AGAAGCCCTA TGTCTGCAGG 1320
GAGTGTGGGC GAGGCTTTAG CTGTAAGTCA CACCTCCTCA TACACCAGAG GACACACACA 1380
GGGGAGAAGC CCTATGTCTG CAGGGAGTGT GGGCGAGGCT TTAGCTGTAA GTCAAGCCTC 1440
CTCATACACC AGAGGACACA CACAGGGGAG AAGCCCTATG TCTGCAGGGA GTGTGGGCGA 1500
GGCTTTAGCC GAAAGTCAGA CCTCCTCATA CACCAGAGGA CACACACAGG GGAGAAGCCC 1560
TGTGTTTGCA GGAAGGGTGA GTAA 1585
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Poa-0137 ENSPPYP00000017162.1 Pongo abelii 83 0.0 894
WERAM-Hos-0177 ENSP00000296682.3 Homo sapiens 82 0.0 876
WERAM-Paa-0092 ENSPANP00000006501.1 Papio anubis 80 0.0 868
WERAM-Mam-0029 ENSMMUP00000005026.2 Macaca mulatta 79 0.0 850
WERAM-Caj-0109 ENSCJAP00000019231.2 Callithrix jacchus 80 0.0 838
WERAM-Chs-0202 ENSCSAP00000013264.1 Chlorocebus sabaeus 80 0.0 816
WERAM-Dan-0153 ENSDNOP00000019431.1 Dasypus novemcinctus 74 0.0 799
WERAM-Soa-0002 ENSSARP00000000218.1 Sorex araneus 74 0.0 792
WERAM-Sus-0183 ENSSSCP00000023246.1 Sus scrofa 75 0.0 788
WERAM-Ran-0144 ENSRNOP00000060531.1 Rattus norvegicus 71 0.0 750
WERAM-Bot-0054 ENSBTAP00000002795.5 Bos taurus 70 0.0 741
WERAM-Mum-0189 ENSMUSP00000131871.1 Mus musculus 72 0.0 740
WERAM-Dio-0007 ENSDORP00000000987.1 Dipodomys ordii 70 0.0 736
WERAM-Otg-0195 ENSOGAP00000016243.1 Otolemur garnettii 71 0.0 736
WERAM-Orc-0206 ENSOCUP00000023211.2 Oryctolagus cuniculus 71 0.0 697
WERAM-Prc-0084 ENSPCAP00000007153.1 Procavia capensis 65 0.0 673
WERAM-Mup-0073 ENSMPUP00000006803.1 Mustela putorius furo 72 2e-174 609
WERAM-Chh-0045 ENSCHOP00000005073.1 Choloepus hoffmanni 72 2e-153 540
WERAM-Pes-0005 ENSPSIP00000002371.1 Pelodiscus sinensis 48 3e-136 483
WERAM-Ocp-0132 ENSOPRP00000013913.2 Ochotona princeps 65 2e-133 473
WERAM-Eqc-0097 ENSECAP00000011324.1 Equus caballus 84 2e-129 459
WERAM-Myl-0115 ENSMLUP00000009197.2 Myotis lucifugus 68 1e-119 427
WERAM-Loa-0175 ENSLAFP00000017573.2 Loxodonta africana 73 2e-112 403
WERAM-Ora-0057 ENSOANP00000008625.2 Ornithorhynchus anatinus 39 1e-100 364
WERAM-Fec-0044 ENSFCAP00000003508.2 Felis catus 86 5e-95 345
WERAM-Aim-0022 ENSAMEP00000001535.1 Ailuropoda melanoleuca 73 6e-94 342
WERAM-Pat-0067 ENSPTRP00000014513.3 Pan troglodytes 85 8e-85 311
WERAM-Mod-0198 ENSMODP00000031611.2 Monodelphis domestica 78 5e-82 302
WERAM-Ova-0031 ENSOARP00000004225.1 Ovis aries 75 5e-79 292
WERAM-Gog-0206 ENSGGOP00000017242.1 Gorilla gorilla 60 6e-74 275
WERAM-Lac-0137 ENSLACP00000015755.1 Latimeria chalumnae 58 8e-68 255
WERAM-Tas-0082 ENSTSYP00000008295.1 Tarsius syrichta 57 4e-61 233
WERAM-Nol-0097 ENSNLEP00000011114.2 Nomascus leucogenys 29 1e-48 192
WERAM-Tag-0028 ENSTGUP00000001982.1 Taeniopygia guttata 28 1e-48 191
WERAM-Meg-0110 ENSMGAP00000011137.1 Meleagris gallopavo 28 6e-47 186
WERAM-Leo-0089 ENSLOCP00000011948.1 Lepisosteus oculatus 29 7e-47 185
WERAM-Anp-0121 ENSAPLP00000013678.1 Anas platyrhynchos 28 2e-46 184
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 27 2e-45 181
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 52 8e-45 179
WERAM-Gaga-0111 ENSGALP00000019484.4 Gallus gallus 28 1e-43 175
WERAM-Cap-0142 ENSCPOP00000011596.2 Cavia porcellus 28 7e-41 166
WERAM-Orla-0174 ENSORLP00000020343.1 Oryzias latipes 27 2e-39 160
WERAM-Xet-0015 ENSXETP00000004492.3 Xenopus tropicalis 26 1e-37 155
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 40 3e-37 154
WERAM-Orn-0032 ENSONIP00000003899.1 Oreochromis niloticus 42 3e-37 154
WERAM-Xim-0168 ENSXMAP00000013864.1 Xiphophorus maculatus 42 3e-37 154
WERAM-Ptv-0137 ENSPVAP00000011602.1 Pteropus vampyrus 38 5e-37 153
WERAM-Dar-0015 ENSDARP00000106969.1 Danio rerio 42 2e-36 151
WERAM-Tar-0166 ENSTRUP00000035409.1 Takifugu rubripes 42 3e-36 150
WERAM-Sah-0097 ENSSHAP00000011079.1 Sarcophilus harrisii 28 6e-34 142
WERAM-Vip-0075 ENSVPAP00000006917.1 Vicugna pacos 25 9e-34 142
WERAM-Fia-0094 ENSFALP00000007850.1 Ficedula albicollis 29 1e-33 142
WERAM-Caf-0212 ENSCAFP00000031903.3 Canis familiaris 28 6e-33 139
WERAM-Mae-0109 ENSMEUP00000010466.1 Macropus eugenii 27 7e-32 136
WERAM-Anc-0027 ENSACAP00000003308.3 Anolis carolinensis 29 3e-31 133
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 42 2e-29 128
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 39 3e-29 127
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 39 3e-29 127
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 41 7e-29 126
WERAM-Pof-0037 ENSPFOP00000003054.2 Poecilia formosa 42 1e-28 125
WERAM-Gaa-0023 ENSGACP00000003553.1 Gasterosteus aculeatus 43 4e-28 123
WERAM-Ten-0207 ENSTNIP00000020889.1 Tetraodon nigroviridis 42 2e-27 121
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 44 3e-24 110
Created Date 25-Jun-2016