WERAM Information

Tag Content
WERAM ID WERAM-Gaa-0023
Ensembl Protein ID ENSGACP00000003553.1
Gene Name prdm1b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGACG00000002716.1 ENSGACT00000003565.1 ENSGACP00000003553.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 3.20e-36 124.4 50 162
Organism Gasterosteus aculeatus
Domain Profile
  HMT RIZ
               RIZ.txt   6 aessipkeg..lgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLaa 92 
                           +e+s+++e+  +gv++k++i++g++fGP+ G ++++++v ++an+k++w+i+++++ +++ +D+ d ++snW+ryvn Ars  eqNL+a
  ENSGACP00000003553.1  50 FEYSTDNERrvMGVFSKEYIPQGTRFGPLQGVIYTKDNVPKQANRKYFWRIYSNEQLQNF-IDGYDVHRSNWMRYVNPARSLAEQNLVA 137
                           56666666557*****************************************66665555.**************************** PP
               RIZ.txt  93 lqineqifYktikdIepdeELLvwy 117
                           +q++++i+++ti ++ep++ELLvwy
  ENSGACP00000003553.1 138 CQNGRDIYFYTIGPVEPNQELLVWY 162
                           ************************* PP
Protein Sequence
(Fasta)		MKLESPLGDM SGWREVDFVL NCTYIVPDQV SDPSFSLPKA MTSIPRNLTF EYSTDNERRV 60
MGVFSKEYIP QGTRFGPLQG VIYTKDNVPK QANRKYFWRI YSNEQLQNFI DGYDVHRSNW 120
MRYVNPARSL AEQNLVACQN GRDIYFYTIG PVEPNQELLV WYSQEFAQRL CGQQADMKPS 180
ECSGRDGFAR RAEKSEGNKV WSKYRYEYLF AASCRTASHP ITSKTQTRDK KKSCFTLSCE 240
RDVSRKGFAN DMEYRQNNVE MLERDTPPDT PDTPDNHIMD FSKKVETEAS AGDTEDRGII 300
PSPEPQHGER GPALNHRYSP DPQPAVPPQQ RNLPLHLHGL YREGVSSYPI YPQSRPIHPN 360
YQLLPPYGAH YPRLLLPSYS PPFPGMLPSR GYLRYNSYLG ADGPQYPPMG QANLLPVSLP 420
YPPPPSQGGL KELKANVSPP RGAPATPELS PLPKPDGQHH PTEQSPSGFE EAMNLSLDTI 480
KSKAATRNGP GHKSLPYPLQ KQNGKIKYEC NICSKTFGQL SNLKVHLRVH SGERPFQCNL 540
CKKSFTQLAH LQKHHLVHTG EKPHECQVCH KRFSSTSNLK THLRLHSGEK PYQCKLCNTK 600
FTQYIHLKLH RRLHSSRDRP YRCQLCAQAF FHRFSLRIHQ CSCCLANSNM PVDVHTKQMV 660
ERFDASQEAD MLTEAASAMQ VEEAVERWLD RTLEGEGKED QKEATL 706
Nucleotide Sequence
(Fasta)		ATGAAGCTGG AAAGCCCACT AGGAGACATG AGCGGGTGGA GGGAGGTGGA CTTTGTCCTC 60
AACTGCACCT ACATTGTGCC AGACCAGGTG TCGGACCCCA GTTTCAGCCT GCCCAAAGCC 120
ATGACGTCCA TCCCACGCAA CCTCACCTTT GAATACAGCA CAGACAACGA GAGGAGGGTG 180
ATGGGCGTCT TCAGCAAAGA GTACATTCCT CAGGGGACTC GGTTCGGCCC TCTGCAAGGG 240
GTCATCTACA CCAAAGACAA CGTTCCCAAA CAGGCCAACA GGAAATACTT TTGGCGGATT 300
TACAGCAATG AGCAGCTCCA AAACTTTATT GACGGCTATG ACGTCCACAG GAGCAACTGG 360
ATGCGTTACG TCAACCCGGC CCGGTCTCTG GCCGAACAGA ACCTGGTGGC GTGCCAGAAC 420
GGCCGGGACA TCTACTTCTA CACCATTGGA CCGGTGGAGC CCAATCAGGA GCTGCTGGTC 480
TGGTACAGCC AGGAGTTTGC CCAAAGGCTC TGCGGCCAGC AAGCCGACAT GAAACCGAGT 540
GAGTGCAGCG GGAGGGACGG CTTTGCTAGG AGAGCAGAGA AATCTGAGGG GAATAAAGTC 600
TGGTCAAAGT ACCGTTACGA GTATTTGTTT GCAGCCAGTT GTAGAACGGC AAGTCATCCC 660
ATCACATCTA AAACACAAAC AAGAGACAAA AAAAAGAGCT GTTTCACATT ATCTTGTGAG 720
AGAGACGTAT CTAGAAAAGG TTTTGCAAAC GACATGGAGT ACAGACAGAA CAACGTGGAG 780
ATGTTGGAGA GAGACACACC GCCTGACACG CCTGACACGC CTGACAACCA CATCATGGAT 840
TTCAGCAAAA AGGTCGAGAC GGAGGCGAGC GCCGGGGACA CAGAGGACCG GGGCATAATT 900
CCATCCCCTG AGCCCCAACA CGGAGAGAGA GGCCCGGCCT TAAATCACCG GTACTCACCG 960
GATCCTCAGC CCGCAGTCCC GCCCCAGCAG CGAAATCTCC CTCTCCACCT CCACGGCCTC 1020
TACAGGGAAG GTGTCTCATC CTACCCGATT TACCCCCAAT CCAGACCCAT CCACCCCAAT 1080
TACCAGCTGC TTCCTCCCTA CGGCGCGCAC TATCCTCGCC TCCTCCTCCC CTCGTACTCC 1140
CCTCCCTTTC CTGGAATGCT GCCCTCAAGA GGATACCTCC GATACAACAG CTACCTGGGC 1200
GCCGACGGCC CTCAGTACCC ACCCATGGGC CAAGCTAATT TACTGCCGGT GTCCCTCCCC 1260
TACCCTCCCC CGCCTTCACA GGGGGGCCTG AAAGAACTCA AAGCAAACGT GTCGCCGCCG 1320
CGAGGCGCGC CAGCCACGCC AGAGCTCTCC CCTCTCCCCA AACCCGACGG TCAGCATCAT 1380
CCCACCGAGC AGTCCCCCTC TGGGTTTGAG GAAGCCATGA ATCTAAGCCT GGATACGATC 1440
AAAAGCAAAG CGGCGACACG CAACGGCCCC GGCCACAAAT CGCTGCCCTA CCCACTGCAG 1500
AAGCAGAATG GAAAGATCAA GTACGAATGT AACATCTGCT CAAAGACTTT CGGACAGCTG 1560
TCGAACCTCA AGGTCCATCT CCGAGTGCAC AGTGGCGAGA GACCGTTCCA GTGTAACCTG 1620
TGTAAAAAGA GCTTCACGCA GCTGGCGCAC CTCCAGAAAC ACCACCTTGT CCACACGGGG 1680
GAGAAACCAC ATGAATGTCA GGTGTGTCAC AAACGCTTCA GCAGCACCAG CAACTTGAAA 1740
ACACACCTCC GCCTCCACTC TGGGGAGAAA CCCTACCAGT GTAAGCTGTG CAACACCAAG 1800
TTCACCCAGT ACATCCACCT CAAACTGCAC CGCCGCCTCC ACAGCAGCCG CGATCGTCCC 1860
TACCGCTGCC AGCTCTGCGC CCAGGCCTTC TTCCACCGCT TTTCCCTCCG CATCCACCAG 1920
TGCAGCTGCT GCCTGGCTAA CTCCAACATG CCCGTCGACG TACACACGAA GCAGATGGTG 1980
GAGCGATTCG ATGCCAGCCA AGAGGCCGAC ATGCTCACAG AGGCGGCGTC GGCAATGCAG 2040
GTGGAGGAGG CGGTGGAGCG CTGGTTGGAT CGCACCTTGG AGGGGGAGGG AAAGGAGGAC 2100
CAGAAGGAGG CGACCCTA 2119
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Tar-0068 ENSTRUP00000013557.1 Takifugu rubripes 72 0.0 917
WERAM-Xim-0207 ENSXMAP00000016799.1 Xiphophorus maculatus 71 0.0 904
WERAM-Orn-0164 ENSONIP00000017081.1 Oreochromis niloticus 68 0.0 869
WERAM-Ten-0207 ENSTNIP00000020889.1 Tetraodon nigroviridis 67 0.0 825
WERAM-Pof-0037 ENSPFOP00000003054.2 Poecilia formosa 66 0.0 810
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 68 0.0 799
WERAM-Leo-0040 ENSLOCP00000005995.1 Lepisosteus oculatus 52 2e-178 623
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 41 2e-137 486
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 42 3e-134 476
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 40 4e-134 476
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 41 4e-133 473
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 41 2e-132 470
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 39 9e-125 445
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 61 2e-79 295
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 59 2e-79 294
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 60 2e-79 294
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 55 3e-79 294
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 56 6e-79 292
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 56 6e-79 292
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 57 9e-79 292
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 59 1e-78 292
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 43 1e-78 291
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 59 2e-78 291
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 59 2e-78 291
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 59 2e-78 290
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 59 3e-78 290
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 59 3e-78 290
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 77 4e-78 290
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 58 7e-78 289
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 58 9e-78 289
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 56 1e-77 288
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 56 1e-77 288
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 56 1e-77 288
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 56 1e-77 288
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 56 1e-77 288
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 56 1e-77 288
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 56 2e-77 288
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 58 2e-77 288
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 59 2e-77 288
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 56 2e-77 287
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 55 3e-77 287
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 56 3e-77 286
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 56 5e-77 286
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 57 6e-77 286
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 55 6e-77 286
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 60 1e-76 285
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 62 1e-76 285
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 58 2e-76 284
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 59 6e-76 283
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 59 1e-75 281
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 59 5e-75 280
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 63 4e-74 276
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 58 1e-73 275
WERAM-Lac-0165 ENSLACP00000019582.1 Latimeria chalumnae 55 1e-59 229
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 60 3e-56 217
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 59 5e-56 216
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 59 2e-55 214
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 59 1e-54 211
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 58 2e-54 211
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 43 7e-28 123
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 37 7e-23 106
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 36 8e-22 103
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 39 9e-21 99.8
Created Date 25-Jun-2016