WERAM Information

Tag Content
WERAM ID WERAM-Tar-0068
Ensembl Protein ID ENSTRUP00000013557.1
Gene Name prdm1b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSTRUG00000005618.1 ENSTRUT00000013619.1 ENSTRUP00000013557.1
ENSTRUG00000005618.1 ENSTRUT00000013620.1 ENSTRUP00000013558.1
ENSTRUG00000005618.1 ENSTRUT00000013621.1 ENSTRUP00000013559.1
ENSTRUG00000005618.1 ENSTRUT00000013622.1 ENSTRUP00000013560.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 2.60e-37 128.7 51 161
Organism Takifugu rubripes
Domain Profile
  HMT RIZ
               RIZ.txt   6 aessipkeglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLaalq 94 
                           +e+  ++e +gv++k++i+ g++fGP+ Ge++++++v ++an+k++w+i+ + ge + ++D+ + +ksnW+ryvn Ars  eqNL+a+q
  ENSTRUP00000013557.1  51 FEYGADNEVTGVFSKEYIPLGTRFGPLQGEIYTKDNVPKQANRKYFWRIY-SGGELQNFIDGYNVHKSNWMRYVNPARSVAEQNLVACQ 138
                           677788899*****************************************.77888888****************************** PP
               RIZ.txt  95 ineqifYktikdIepdeELLvwy 117
                           +n +i+++ti+++ep++ELLvwy
  ENSTRUP00000013557.1 139 NNGEIYFYTIRPVEPNQELLVWY 161
                           *********************** PP
Protein Sequence
(Fasta)		IMKLENTHGD MSCWKEVEFA LNCTYIVPDQ VSDPSFSLPK AMTSIPRNLT FEYGADNEVT 60
GVFSKEYIPL GTRFGPLQGE IYTKDNVPKQ ANRKYFWRIY SGGELQNFID GYNVHKSNWM 120
RYVNPARSVA EQNLVACQNN GEIYFYTIRP VEPNQELLVW YSQEFAQRLC SQQSDAKPRK 180
NSSSKNKNLV TNLTKTEYTH AEEDCETENS KQQLPQQTWL KNRTKEEVKD EKDDEEKIDV 240
EMLERDTPPD TPDEQVMDFS KKVEKESSRD PEERGSVPQN EHREHTLSLT HPFFLDHHPA 300
LPSPHRNLPL HLHGLYGHKE GLVSTYPLYP QPRPIHPTYQ LLPPYSPHYP RLLLPSYSPP 360
FPGMAPSRGS LRYSGYLGTD GLPYPPIGQH NLLPVSLPYP PSQGSLKELT PNVSPPRGAP 420
ATPELSPLPK PSNHSPEPSP SACEEAMNLS LATAKSPTAA HSSPGHKSLP YPLKKQNGKI 480
KYECNICSKT FGQLSNLKVH LRVHSGERPF QCNLCKKSFT QLAHLQKHHL VHTGEKPHEC 540
QVCHKRFSST SNLKTHLRLH SGEKPYQCKI CNTKFTQYIH LKLHRRLHSN QDRPHRCQLC 600
AQTFFHHFSL RIHQHSCCLA AFKAPVNVHM KEMVERFDTS QEADMLEETA TAPQIEEAIE 660
RWLARSLEGE KKEDHMEATI
Nucleotide Sequence
(Fasta)		ATCATGAAGC TGGAGAACAC ACATGGAGAC ATGAGCTGCT GGAAGGAGGT GGAATTTGCC 60
CTCAACTGCA CCTACATTGT GCCAGACCAG GTGTCAGACC CCAGCTTCAG CCTCCCCAAA 120
GCTATGACCT CCATCCCGCG GAACCTCACC TTCGAATACG GCGCTGACAA TGAGGTGACA 180
GGTGTGTTCA GCAAAGAATA CATCCCACTG GGGACTCGTT TTGGTCCCCT GCAAGGAGAA 240
ATATACACCA AAGATAATGT CCCGAAACAG GCCAACAGGA AATATTTCTG GAGGATTTAC 300
AGTGGTGGTG AACTTCAGAA TTTCATAGAT GGCTACAACG TCCATAAGAG CAACTGGATG 360
CGTTACGTAA ACCCCGCCCG CTCTGTGGCC GAACAGAACC TAGTGGCATG TCAGAACAAC 420
GGGGAAATCT ACTTTTACAC AATCAGGCCA GTGGAGCCGA ACCAGGAGCT GCTGGTGTGG 480
TACAGCCAGG AGTTCGCCCA GAGGCTCTGC AGCCAGCAGA GCGATGCCAA ACCAAGGAAA 540
AATTCTTCTT CAAAGAACAA AAACCTGGTG ACTAACCTCA CAAAGACAGA ATACACACAT 600
GCTGAAGAAG ACTGTGAAAC GGAGAACAGC AAGCAGCAAC TACCTCAGCA AACATGGCTA 660
AAAAACAGAA CAAAGGAAGA GGTGAAAGAT GAGAAGGACG ACGAGGAGAA GATCGACGTG 720
GAGATGCTGG AGCGAGACAC TCCGCCAGAC ACCCCGGATG AGCAGGTCAT GGACTTCAGC 780
AAAAAGGTGG AGAAGGAGAG CAGTAGAGAT CCAGAGGAAC GCGGGAGTGT TCCACAGAAC 840
GAGCACAGGG AGCACACTCT GAGTTTGACT CACCCGTTCT TCTTGGACCA TCATCCTGCA 900
CTTCCTTCTC CACACAGGAA TCTCCCTCTT CACCTCCATG GTCTCTATGG CCACAAGGAA 960
GGACTTGTTT CAACCTACCC TCTTTACCCC CAGCCTCGAC CCATCCACCC AACTTACCAG 1020
CTCCTTCCTC CCTACAGCCC TCACTATCCC CGCCTCCTTC TACCCTCATA CTCCCCTCCA 1080
TTTCCCGGAA TGGCTCCCTC AAGAGGATCC CTCCGATACA GCGGCTATCT AGGCACAGAC 1140
GGACTCCCGT ACCCGCCGAT CGGCCAGCAC AATCTACTCC CAGTGTCCCT CCCTTACCCT 1200
CCTTCTCAGG GCAGTCTGAA AGAACTCACA CCGAATGTGT CTCCTCCTCG AGGAGCTCCA 1260
GCCACTCCTG AACTGTCTCC ACTCCCAAAA CCCAGCAACC ACTCTCCTGA GCCATCTCCT 1320
TCTGCTTGTG AAGAAGCCAT GAATCTGAGC CTGGCCACAG CCAAATCCCC CACAGCAGCG 1380
CACAGTAGCC CCGGACACAA ATCCTTGCCT TACCCGCTGA AGAAGCAGAA TGGAAAGATT 1440
AAGTATGAAT GTAACATCTG CTCAAAGACG TTTGGACAGC TGTCAAACCT CAAGGTCCAT 1500
CTCCGAGTGC ACAGTGGTGA GAGACCGTTC CAGTGTAACC TCTGCAAAAA AAGCTTCACG 1560
CAGCTGGCCC ACCTCCAGAA ACATCACCTG GTCCACACAG GAGAGAAACC TCATGAATGT 1620
CAGGTGTGTC ACAAACGCTT CAGCAGCACC AGCAATTTGA AGACACACCT GCGTCTACAT 1680
TCTGGAGAAA AACCTTACCA GTGCAAGATA TGCAACACCA AGTTCACCCA GTACATCCAC 1740
CTGAAGCTTC ACCGCCGCCT CCACAGCAAC CAGGACCGTC CCCACCGCTG CCAGCTCTGC 1800
GCCCAGACCT TTTTCCATCA CTTCTCCCTA CGCATCCACC AGCACAGCTG CTGCCTGGCT 1860
GCTTTTAAGG CCCCTGTCAA CGTGCACATG AAGGAGATGG TGGAGCGCTT TGACACGAGC 1920
CAGGAGGCTG ACATGCTGGA GGAAACAGCA ACGGCCCCGC AGATCGAGGA AGCCATAGAG 1980
CGCTGGTTGG CTCGCAGTCT GGAAGGTGAG AAAAAGGAGG ACCACATGGA GGCAACCATA 2040
2041
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ten-0207 ENSTNIP00000020889.1 Tetraodon nigroviridis 78 0.0 1010
WERAM-Xim-0207 ENSXMAP00000016799.1 Xiphophorus maculatus 74 0.0 946
WERAM-Orn-0164 ENSONIP00000017081.1 Oreochromis niloticus 70 0.0 896
WERAM-Gaa-0023 ENSGACP00000003553.1 Gasterosteus aculeatus 72 0.0 880
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 69 0.0 841
WERAM-Pof-0037 ENSPFOP00000003054.2 Poecilia formosa 83 1e-155 547
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 42 1e-137 488
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 41 2e-135 480
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 41 2e-131 467
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 40 2e-131 466
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 40 3e-131 466
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 41 7e-131 465
WERAM-Leo-0040 ENSLOCP00000005995.1 Lepisosteus oculatus 55 9e-110 395
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 49 7e-81 299
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 50 4e-80 296
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 49 8e-80 295
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 49 1e-79 295
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 49 2e-79 294
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 44 2e-79 294
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 50 2e-79 294
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 53 3e-79 293
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 53 3e-79 293
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 49 5e-79 293
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 49 6e-79 292
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 49 6e-79 292
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 49 6e-79 292
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 58 7e-79 292
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 49 7e-79 292
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 49 7e-79 292
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 48 9e-79 292
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 49 2e-78 291
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 49 2e-78 291
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 55 2e-78 291
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 55 2e-78 290
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 55 3e-78 290
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 57 6e-78 289
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 48 1e-77 288
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 57 1e-77 288
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 49 1e-77 288
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 54 2e-77 288
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 50 2e-77 287
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 57 3e-77 287
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 55 3e-77 286
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 54 4e-77 286
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 57 4e-77 286
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 55 8e-77 285
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 59 9e-77 285
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 53 1e-76 285
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 61 3e-76 283
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 60 5e-76 283
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 60 7e-76 282
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 60 2e-75 281
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 57 3e-75 280
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 62 2e-58 224
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 63 2e-58 224
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 62 7e-58 223
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 62 8e-58 222
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 62 1e-56 219
WERAM-Lac-0194 ENSLACP00000022113.1 Latimeria chalumnae 62 1e-56 218
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 41 6e-27 120
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 44 4e-22 103
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 39 1e-21 102
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 34 2e-19 95.5
Created Date 25-Jun-2016