WERAM Information

Tag Content
WERAM ID WERAM-Sus-0027
Ensembl Protein ID ENSSSCP00000004716.2
Gene Name PRDM1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000004369.2 ENSSSCT00000004830.2 ENSSSCP00000004716.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 3.30e-42 143.7 86 201
Organism Sus scrofa
Domain Profile
  HMT RIZ
               RIZ.txt   3 velaessipkeg.lgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNL 90 
                           + l+++++++++ +gv +k++i+kg++fGP++Ge++++++v +nan+k++w+i+ ++ge ++++D+ +eeksnWlryvn A+s +eqNL
  ENSSSCP00000004716.2  86 NLLFKYATNSKEvIGVVSKEYIPKGTRFGPLIGEIYTNDTVPKNANRKYFWRIY-SRGELHHFIDGFNEEKSNWLRYVNPAHSAREQNL 173
                           56788888887779****************************************.9********************************* PP
               RIZ.txt  91 aalqineqifYktikdIepdeELLvwyk 118
                           aa+q++++i+++tik+I++++ELLvwy+
  ENSSSCP00000004716.2 174 AACQNGMNIYFYTIKPIPANQELLVWYC 201
                           ***************************6 PP
Protein Sequence
(Fasta)		MLDICLEKRV GTTLAAPKCS SSAVKFPGLA VGTEGTMKMD MEDADMTLWT EAEFEEKCTY 60
IVNDHPWDSG VDGGISVQAE ASLPRNLLFK YATNSKEVIG VVSKEYIPKG TRFGPLIGEI 120
YTNDTVPKNA NRKYFWRIYS RGELHHFIDG FNEEKSNWLR YVNPAHSARE QNLAACQNGM 180
NIYFYTIKPI PANQELLVWY CRDFAERLHY PYPGELTMMN DTQIQSHPKQ QSTEKHELCP 240
RNVPKREYSV KEILKLDSHP PKGKDLYRSN ISPLTSEKGP DDFRKNGSPD MPFYPRVVYP 300
IRAPLPEDFV KASLAYGMER PTYITHSPIP SSTPPSPSAR SSPDRSLQSC SPHSSPGNAV 360
SPLAPGAQEH RDSYAYLNAP YGAAEGLGSY PGYAPAPHLP PAFIPSYNAH YPKFLLPPYG 420
MNCNSLGAVG NINGLNNFGL FPRLYPVYGG LLGGGGLPPP MLAPASLPSS LPSEGTRRLL 480
QPEHPREVLV PAPSHSAFSL PGAAASLKDK ACSPTSGSPT AGTAATAEHV VQPKATSAAA 540
AAPGGGNDEA VNLIKNKRNM TGYKTLPYPL KKQNGKIKYE CNVCAKTFGQ LSNLKVHLRV 600
HSGERPFKCQ TCNKGFTQLA HLQKHYLVHT GEKPHECQVC HKRFSSTSNL KTHLRLHSGE 660
KPYQCKVCPA KFTQFVHLKL HKRLHTRERP HKCAHCHKSY IHLCSLKVHL KGHCPAAPAT 720
GLPLEDLTRI NEEIEKFDIS DNADRLEDME DNIDVTSVVE KEILAVVRKE KEETGLKVSL 780
QRNVGNGLLS GCSLYESTDP SLLKLPHSNP LPLGPVKVKQ ETVEPMDP 828
Nucleotide Sequence
(Fasta)		AAGATTCCAA GTCAATGTTG AAATTCGCAG AGCAGAGAGG AAGCGGCAGG CGCTGGCGAG 60
CTGGGGGAAA GCCCTGGCCG AGCGCGGCGC GGCGCGGCCG AGTCCAGGTG TGGCCACGCC 120
CCCACTTCAG GCAGCTGGTA GGAGTGAATC AGAAATCCGC AGCAGGGAGG GGAAAGGGCC 180
GAGCCGCCGG CCGGGTTAAC AGACAGAAAG TGCTGCCGTG ACACTCGGCC CTCCAGTGTT 240
GCGGAGAGGC AGAGCAGCGC GGCACCTGTC CGCGTCGGGA GCCGGGACGC GGGCGCCGGC 300
GGCCGGAGCA GAGGGCACCG CGGCGGTGCG CGACAGCCCT CGGCGGGGAG GGGAACGCGG 360
AGCACATGCG GACTGTGTAG GGATGAGCAA CACTTATCTC CGATGTTGGA TATTTGCTTG 420
GAAAAACGTG TGGGTACGAC CTTGGCTGCC CCCAAGTGTA GCTCCAGTGC CGTGAAGTTT 480
CCAGGGTTGG CAGTGGGGAC CGAGGGGACC ATGAAAATGG ACATGGAGGA CGCGGATATG 540
ACTCTGTGGA CAGAAGCTGA GTTTGAGGAG AAGTGTACAT ACATTGTGAA CGACCACCCC 600
TGGGATTCTG GCGTCGATGG AGGGATTTCG GTTCAGGCAG AGGCATCCTT ACCAAGGAAT 660
CTGCTTTTCA AATATGCCAC CAACAGCAAA GAGGTTATTG GAGTGGTGAG TAAAGAATAC 720
ATACCAAAGG GAACACGTTT TGGACCTCTA ATAGGTGAAA TCTACACCAA CGACACAGTT 780
CCCAAGAACG CCAACAGGAA ATATTTTTGG CGGATCTATT CCAGAGGGGA GCTTCACCAC 840
TTCATCGACG GCTTTAATGA GGAGAAGAGC AACTGGCTGC GCTACGTGAA CCCAGCACAC 900
TCTGCCCGGG AGCAGAACCT GGCCGCCTGT CAGAACGGCA TGAACATCTA CTTCTACACC 960
ATTAAGCCCA TTCCTGCCAA CCAGGAGCTT CTTGTGTGGT ATTGTCGGGA CTTTGCGGAA 1020
AGGCTCCACT ACCCTTATCC TGGAGAGCTG ACAATGATGA ATGACACACA AATCCAGAGC 1080
CATCCAAAGC AGCAGAGCAC CGAGAAACAT GAACTTTGCC CCAGGAACGT CCCAAAGAGA 1140
GAATACAGCG TGAAAGAAAT CCTGAAATTG GACTCCCACC CTCCCAAAGG AAAGGACTTG 1200
TACCGCTCCA ACATTTCACC CCTGACTTCA GAAAAGGGCC CGGACGACTT CAGAAAAAAC 1260
GGGAGCCCCG ACATGCCCTT CTACCCGCGG GTGGTGTACC CCATCCGGGC CCCTCTCCCG 1320
GAAGACTTTG TGAAGGCGTC CCTGGCCTAC GGGATGGAGA GGCCCACCTA CATCACGCAC 1380
TCCCCCATCC CGTCCTCCAC GCCGCCCAGC CCCTCGGCGC GCAGCAGCCC CGACCGGAGC 1440
TTGCAGAGCT GCAGCCCGCA CAGCAGCCCA GGGAACGCCG TGTCGCCGCT GGCGCCCGGC 1500
GCCCAGGAGC ACCGCGACTC CTACGCCTAC TTGAACGCTC CGTACGGCGC CGCTGAAGGA 1560
CTGGGCTCCT ACCCCGGCTA TGCGCCAGCA CCACACCTGC CGCCCGCCTT CATCCCGTCC 1620
TACAACGCGC ACTACCCCAA GTTCCTGCTG CCGCCCTACG GCATGAACTG CAACAGCCTG 1680
GGCGCCGTGG GCAACATCAA CGGCCTCAAC AACTTCGGCC TCTTCCCCAG GCTGTACCCG 1740
GTGTACGGCG GCCTCCTGGG AGGGGGCGGC CTGCCTCCCC CGATGCTGGC GCCCGCCTCC 1800
CTCCCCAGCT CGCTGCCGTC GGAGGGGACG CGCCGGCTGC TGCAGCCCGA GCACCCCCGG 1860
GAAGTGCTGG TGCCCGCCCC GTCGCACAGC GCCTTCTCCC TGCCCGGGGC GGCCGCCAGC 1920
CTGAAGGACA AGGCCTGCAG CCCCACCAGC GGGTCCCCGA CGGCCGGCAC CGCGGCCACG 1980
GCCGAACACG TGGTGCAGCC CAAAGCTACC TCAGCGGCCG CGGCCGCTCC CGGCGGCGGC 2040
AACGACGAGG CCGTGAATCT CATCAAGAAC AAAAGGAACA TGACCGGCTA CAAGACGCTC 2100
CCCTACCCGC TGAAGAAGCA GAACGGCAAG ATCAAGTATG AGTGCAACGT CTGTGCCAAG 2160
ACCTTTGGCC AGCTCTCAAA TCTGAAGGTC CACCTCCGGG TGCACAGTGG AGAACGGCCT 2220
TTCAAATGCC AGACTTGCAA CAAGGGTTTC ACGCAGCTCG CCCACCTGCA GAAACACTAC 2280
CTGGTACACA CGGGAGAGAA GCCACATGAA TGCCAGGTTT GCCACAAGCG ATTTAGCAGC 2340
ACCAGCAATC TCAAGACCCA CCTGCGACTC CACTCGGGAG AGAAACCTTA CCAGTGCAAG 2400
GTGTGCCCCG CCAAGTTCAC CCAGTTTGTG CACCTGAAAC TCCACAAGCG CCTACACACC 2460
CGGGAGCGGC CCCACAAGTG CGCCCACTGC CACAAGAGCT ACATCCACCT CTGCAGCCTC 2520
AAGGTCCATC TGAAGGGGCA CTGTCCTGCG GCCCCGGCCA CTGGGCTGCC TCTGGAGGAC 2580
CTGACCAGAA TCAATGAAGA AATCGAGAAG TTTGACATCA GCGACAATGC TGACCGGCTG 2640
GAGGACATGG AGGACAACAT CGATGTGACT TCAGTGGTGG AAAAGGAAAT TCTGGCCGTG 2700
GTCAGAAAAG AGAAAGAAGA AACTGGCCTG AAAGTGTCTT TGCAAAGAAA CGTGGGGAAT 2760
GGACTGCTCT CAGGGTGTAG CCTCTATGAG TCAACAGACC CGTCCCTCCT GAAGTTGCCT 2820
CACAGCAACC CACTACCTCT AGGACCTGTA AAGGTCAAAC AAGAAACAGT CGAACCAATG 2880
GATCCTTAAG ATTTTCAGAA AACAAAAGGT GTTTTGTCTT GTTTCTTAAC TTATGACTTG 2940
GCGAGTCAGG GTGGCTGTAA CAAATGCTTG TACATAATTC CAGTTCTGCA AAGCTCTCCT 3000
GACGGCACAT GGTTTCCCCT CACCTCTCTG GAATTAAAGA AGGAGCCCCA AAGTTACTGA 3060
AATCTCAGGG TATAAATGAG GCAAAGACAA TATATATATA CATATTATAT ATACTTATTT 3120
ACACCCCATC TATATATTTG AACCTGTGTA TTTTGAATAT TTGTGTGGAT ATGTTTGCAT 3180
AGCCTTCCCA TTGCTAAGAC TATTGCCTAG CCATAATTAT TTTTTCAATG ATAATCCTTC 3240
ATAATTTATT ATACAATTTA TCATTCAAAA AGCAATAATT AAAAAAAAGT TTACAATGAC 3300
TGGAAGAATT CCTTGTAATT TGAGTTAAAT GTTGTATTTT TGTCTGGTGG CCATTCTTTG 3360
TAGATAATTT CTGCACATCT GTTTTAAGTA CCTAAGTTCT AGTAAACAAA CATTACTTCA 3420
GTCAACCTCC CTCTATAATA ATGGTTTGGA AATGAAGTTT TGGTATTGCC AAAGTTAGGC 3480
AGTTGATGTG TTCATTCATA GGATTGTATC ATTTGAACAG CATTGTATAA CTTGGGGGGT 3540
ATGTGTGCAG AACTATCCAG TAATAACTTC AGTAGAAGAA ATGAAAGAGA ATCTTGTATG 3600
TTTCTGTAGA TAGCTCAGAT TCCCCCCCCA CACACCCCAG CCACAGATTT ACCAGAAAGG 3660
TGACAAGAAC GCTTTGCCAA TCTGTCTCCC TCCAAAAAAA ACAATCAGGG TCACCCCACC 3720
CCAAAGTCAT GTGACCATTC AGAGTGGCCA GGAAACTTTT ACATCCCAGA GCTTTATCTG 3780
AAAATGTGAA GAAGACAAAA TACCACATTT AAAACCACTG CAAAACATTC CAAAAGCACA 3840
GGTAGTTTTG TATGTGTGAG GTCTTGGGGC ATGACATGAG TCTGGGTGTT TTTTTTGTTG 3900
GTCTTTTTTG TTGTTATGTC ACAATGGCAC AAACATGGTG CTCTACCAGG AAGGATTGGA 3960
GTTAGTCAGG CTCAGGCCAC CCTTTTTAAA AAAAAAAAAA AGCCCCAAAC CGGAAAACGG 4020
GTATTCTCAT TGTCTTAGGG TCAAAGCGGG TAATGAACAT TCCTATCCCC GACACATCAA 4080
TTGTATTTTT TTTCTGTACA ACTCAGACTT TCCTCAGTAT TTGTGTTTTT ACATTTTATG 4140
GTTAACTTAA TTGAAGAAGA AAGGGCATTG CAAAGTTGCA ACAACAATTA CCTCATTGAG 4200
TGTGTCCAGT AGTGGAGGAA GTGATGGCTT CTCTAATTTG CTACCAGAGG AGAAAGCTAG 4260
TGTGCGCCAG AAAGCTAGAA TGCATGCCAT TCTGTCTCCT CTGCTAAGCC CAAGATGACT 4320
TGTCGGCATT CAAGGTGTAG GGGAGAACGA TGTATATTTA TAAATCTATT TATACCACTA 4380
TTCCATGTGT ATATATAATA TATTTATAAC CACTTCAATT GTGAGCCAAA CCATGTAAAA 4440
GATCCTACTT TTTTTCCTAA CGGCCAAAAA AAAAAAAAAA AAAAAAAAAC CTTTCTAAGA 4500
CTTTGCTTAA TTAGCACTCA ATGACCTCGC AATCACATTG GTGAGCCTGG GCACCCCCTT 4560
CTCTTGTAAG AGACCCTAAA TCCTTGGAAC AAAGGTGGAG ACCGAGTAAC AAGCAGGGAG 4620
AAAGAGAGAC ATCACTTTTT TACTATTAAA GGACAATCCA AGATGGCTTT ATTTAATTTT 4680
GGGGTGGGGG CCACATTCTG ACAATGTGGT CAAACCCAAG TCCCAGAAAT AAAAATCATA 4740
TTGTCCACTG TAACTTTTCC CTCTGGTTGT TTGTCTCCCT CCTTTCTGAG TAACTGATCC 4800
TGCAGAAGAG AATCCTGCAG ATTGAGGGTA ATCCAGGGAA CACCAAGAGC CTTACTGATC 4860
TGTTCCTTTG ATGAAACTGA CAATTTTGTA TGTCTCAGTG TTTGACAAAA ACAGTCCTTA 4920
ATCGCAGGTA AACCAAAGCA TCAGAGACAC CAAATACTTT CTATTCCCAA CCACTCATTT 4980
GTTCTCTTTT CCCTTTGAGC TTTCTCCTAC ATGGGGATTT TTTACCGAGA CCTGACCAGT 5040
GGCTTGAGAC TGCTTGATTC TCTTTATCAT CTGACTTTCC CTCTGAGGCC TCTTACATGT 5100
GAATGTTGAG CCCACAATCA GCAGTGGTTT TATTATTTTT TCCTTCTACT CAAAGTTAAA 5160
ACTGACCAAA GTTATTGGCT TTTTACTTTG CTAGAACAAC AAATTATCTT ATGTTTACGT 5220
ACTGGTTTAC ATTGTTATTT ATGTGCAAAT TGTCAAAATG TAAATTAAAT ATAAATGTTC 5280
ATGCTTTACC AATGCTTGT
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 92 0.0 1400
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 90 0.0 1395
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 91 0.0 1384
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 90 0.0 1372
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 92 0.0 1371
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 90 0.0 1370
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 90 0.0 1369
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 90 0.0 1368
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 90 0.0 1367
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 90 0.0 1363
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 90 0.0 1363
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 90 0.0 1361
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 90 0.0 1360
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 88 0.0 1359
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 90 0.0 1347
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 89 0.0 1346
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 91 0.0 1336
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 88 0.0 1331
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 90 0.0 1327
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 84 0.0 1315
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 89 0.0 1308
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 89 0.0 1300
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 83 0.0 1296
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 86 0.0 1294
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 87 0.0 1283
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 85 0.0 1264
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 87 0.0 1242
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 79 0.0 1239
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 78 0.0 1228
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 84 0.0 1198
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 79 0.0 1193
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 79 0.0 1192
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 79 0.0 1190
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 80 0.0 1189
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 78 0.0 1177
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 79 0.0 1175
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 77 0.0 1170
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 77 0.0 1164
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 77 0.0 1112
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 76 0.0 1087
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 73 0.0 1080
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 75 0.0 1075
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 69 0.0 946
WERAM-Leo-0172 ENSLOCP00000020417.1 Lepisosteus oculatus 65 0.0 919
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 53 0.0 733
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 53 0.0 730
WERAM-Orn-0077 ENSONIP00000008446.1 Oreochromis niloticus 50 0.0 681
WERAM-Pof-0225 ENSPFOP00000018402.1 Poecilia formosa 49 0.0 681
WERAM-Xim-0163 ENSXMAP00000013381.1 Xiphophorus maculatus 50 0.0 669
WERAM-Tar-0004 ENSTRUP00000000947.1 Takifugu rubripes 48 0.0 657
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 85 0.0 640
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 89 3e-172 603
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 92 2e-169 593
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 83 3e-152 536
WERAM-Lac-0165 ENSLACP00000019582.1 Latimeria chalumnae 42 2e-129 460
WERAM-Ten-0146 ENSTNIP00000015268.1 Tetraodon nigroviridis 71 1e-84 312
WERAM-Gaa-0096 ENSGACP00000012338.1 Gasterosteus aculeatus 66 3e-84 310
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 65 3e-75 281
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 60 9e-53 206
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 39 4e-29 127
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 36 8e-24 110
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 36 4e-23 107
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 37 2e-19 95.5
Created Date 25-Jun-2016