Tag |
Content |
WERAM ID |
WERAM-Pes-0146 |
Ensembl Protein ID |
ENSPSIP00000017189.1 |
Gene Name |
HDAC11 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-IV |
2.40e-159 |
529.4 |
50 |
336 |
HDAC |
Class-I |
2.40e-25 |
89.8 |
39 |
329 |
|
Organism |
Pelodiscus sinensis |
Domain Profile |
HDAC Class-IV
class-4.txt 1 leklhpfdaskwkkvikflkeeklledealveareaskedllvvhtrkylkslksslkvatiteiplvaflpnflvqrkvlrplrlqag 89 leklhpfda+kw+kvi+flkeekl+ d+ +v+area+++dllvvhtr+yl++lk+s++vatiteip+v flpnflvqrkvl+plr+q+g ENSPSIP00000017189.1 50 LEKLHPFDAGKWGKVINFLKEEKLIADDLIVQAREATEDDLLVVHTRRYLNKLKWSFVVATITEIPPVLFLPNFLVQRKVLKPLRMQTG 138 79*************************************************************************************** PP class-4.txt 90 GtilaaklaverGwainvGGGfhhcsserGGGfcayaditlaikflferlkaisrviiidldahqGnGherdfaddkrvyildvynrei 178 Gti+a+kla++rGwainvGGGfhhcss++GGGfcayaditlaikflfer++++s+++iidldahqGnGherdf+dd+rvyi+dvynr+i ENSPSIP00000017189.1 139 GTIMAGKLAIDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVEGVSKATIIDLDAHQGNGHERDFMDDRRVYIMDVYNRYI 227 ***************************************************************************************** PP class-4.txt 179 ypkdrvakeairrkvelesgtedeeylekleralkkslqefepdlvvynaGtdvleGdrlGalkispegivkrdevvfrlvrakdipiv 267 yp+d +ak+ai+rkvel++gted+eyl+k++ +++ +l+e +pd++vynaGtd+l+Gd+lG+l+isp+givkrdevvf+ +r+++ipi+ ENSPSIP00000017189.1 228 YPGDGFAKRAIKRKVELDWGTEDTEYLQKVQTHVEGALNELRPDIIVYNAGTDILDGDPLGGLAISPQGIVKRDEVVFKAARSHRIPIL 316 ***************************************************************************************** PP class-4.txt 268 mvtsGGyqkrsarviadsil 287 mvtsGGyqkr+ar+iadsil ENSPSIP00000017189.1 317 MVTSGGYQKRTARIIADSIL 336 ******************95 PP
HDAC Class-I
class-1.txt 5 yaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkve.penaeelskelkkfnvgedc 92 y d +++ + ++ hp ++ + +++ + +l + iv++++a+ ++ll +h+ y++ lk + + + +e++ l n ENSPSIP00000017189.1 39 YSPDYNITFMGLEKLHPFDAGKWGKVINFLKEEKLIADDLIVQAREATEDDLLVVHTRRYLNKLKWSFvVATITEIPPVLFLPN----F 123 556666666677788999999999999999999999999999******************999986541555556665444333....4 PP class-1.txt 93 PvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlhhGDgveea 178 v ++ + ++ tG+++ a k + ++ ain GG+hh ++ Gfc Di lai l ++ + id+d h G+g e ENSPSIP00000017189.1 124 LVQRKVLKPLRMQTGGTIMAGKLAI--DRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFErveGVSKATIIDLDAHQGNGHERD 210 4555666667899*****8765444..45789****************************999872224567899************** PP class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267 f rv + + y+ + +Pg G + + v l+ g +D++y + +++ ++ ++ +P+++v + G+D l gD+lg ENSPSIP00000017189.1 211 FMDDRRVYIMDV--YNRYIYPGDGFAKRAIKR-------KVELDWGTEDTEYLQKVQTHVEGALNELRPDIIVYNAGTDILDGDPLGGL 290 *******98765..89999****976654443.......3799********************************************** PP class-1.txt 268 nlsikghae....cvkfvksfnlpllvlGGGGYtlrnvaR 303 +s +g+ + + k +s+++p+l++ GGY++r aR ENSPSIP00000017189.1 291 AISPQGIVKrdevVFKAARSHRIPILMVTSGGYQKRT-AR 329 ******987565566889***************9874.44 PP
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Protein Sequence (Fasta) | MWGLILERTL LYFSCYIQEL PHRTELYHEV PPTCWPIVYS PDYNITFMGL EKLHPFDAGK 60 WGKVINFLKE EKLIADDLIV QAREATEDDL LVVHTRRYLN KLKWSFVVAT ITEIPPVLFL 120 PNFLVQRKVL KPLRMQTGGT IMAGKLAIDR GWAINVGGGF HHCSSDKGGG FCAYADITLA 180 IKFLFERVEG VSKATIIDLD AHQGNGHERD FMDDRRVYIM DVYNRYIYPG DGFAKRAIKR 240 KVELDWGTED TEYLQKVQTH VEGALNELRP DIIVYNAGTD ILDGDPLGGL AISPQGIVKR 300 DEVVFKAARS HRIPILMVTS GGYQKRTARI IADSILNLHN LGLIDKELAT SEAENPKCNV 360 EKLDCPSHLT IQRTRKASPW DCEILLTXXX XXXXXXXXXX XXXXXXX 407Protein Fasta Sequence
>ENSPSIP00000017189.1|Class-I|Pelodiscus sinensis MWGLILERTLLYFSCYIQELPHRTELYHEVPPTCWPIVYSPDYNITFMGLEKLHPFDAGKWGKVINFLKEEKLIADDLIVQAREATEDDLLVVHTRRYLNKLKWSFVVATITEIPPVLFLPNFLVQRKVLKPLRMQTGGTIMAGKLAIDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVEGVSKATIIDLDAHQGNGHERDFMDDRRVYIMDVYNRYIYPGDGFAKRAIKRKVELDWGTEDTEYLQKVQTHVEGALNELRPDIIVYNAGTDILDGDPLGGLAISPQGIVKRDEVVFKAARSHRIPILMVTSGGYQKRTARIIADSILNLHNLGLIDKELATSEAENPKCNVEKLDCPSHLTIQRTRKASPWDCEILLTXXXXXXXXXXXXXXXXXXXX
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Nucleotide Sequence (Fasta) | CGGTTCCCGC CCTGCAGTGT GGGGAGAGCT GCTCAGGCCA GGGCCGGCTC TGCTCGGGCT 60 GCGCCCCTTG CCGTGCAGGC GCCAGGGGCG CGTCGCTAGT GTTGCACGTG GTGACCTTTG 120 CCAGTGTAGT GATCCGAATC GCTTCACAAC GTCAGCAACT AATTAATTGC TTCCTATTGT 180 CTTTATTTCC TGTAAGTTAC TTGACTGGCC GGCAGTAAGT GTGGGCCTTC ACAGTCCGTT 240 GGCATCATTT CCAGTTTAAT TTTAAATACT TTTAGGAATA ATTTAAATTA AAAAATCCGT 300 TTTCTTTCAA ATGGGTTTTC TGAATTCGTC ATTTTTCCAT GAGGACTTTT TGTGTCTTTG 360 AATTTCTGTC TGTGGTTGTA TGAAAGAACC CATGCAAATA GAAGGGGGAA ATTGAGTATT 420 AGGGATGTTG AGGGGTGCTT ATTTTGTAAA TGTGGAACTG CGCTATAGTT CAATGAATAC 480 ATGTTTACAC ATGGGGGAGC AGGCAGGAGC TGATGCTCTT GGGGAGCTGG CTTTTAAGCC 540 AACTTCCTGC GAGCGCCATT TCCCACCTGC TCCCTCCATT CCCTGCTCCC GTGATGCTGC 600 CTTTGTGGGA GGCAGCAGTG TGGGGGTGGC AGGTGTCTCC CCATGATTAC CAACTCTCAC 660 CTGTCCCACT CCCCCGTGTC TGATACAAAG GTAGAGCTGG GGAGGCTGCG CGTAACCGTT 720 AGAATTAACC AAGCCCAGAC TCATCAGTTA ATCGTGTACA TAGCTACACA TTCACATGTG 780 GGGTCTGATT CTGGAAAGAA CTCTTCTGTA TTTTTCCTGT TATATCCAAG AGTTGCCTCA 840 CAGAACCGAG CTGTATCATG AAGTCCCACC AACATGCTGG CCTATTGTAT ATTCTCCAGA 900 CTACAACATC ACATTTATGG GATTGGAGAA GCTACATCCA TTTGATGCAG GGAAATGGGG 960 AAAAGTAATC AATTTCTTAA AAGAAGAAAA ACTAATTGCA GACGACTTGA TTGTACAGGC 1020 ACGAGAAGCT ACTGAAGATG ATTTGTTGGT TGTCCACACA AGACGCTACT TGAATAAATT 1080 AAAGTGGTCA TTTGTAGTGG CTACAATTAC AGAAATTCCT CCAGTTCTCT TTCTTCCCAA 1140 TTTCCTTGTT CAGAGAAAGG TGCTGAAGCC TCTGAGAATG CAGACAGGAG GAACAATAAT 1200 GGCGGGAAAA CTTGCCATTG ACAGAGGCTG GGCAATCAAC GTGGGTGGTG GCTTCCATCA 1260 CTGTTCAAGT GATAAAGGTG GAGGGTTTTG TGCATATGCT GATATCACAC TGGCTATTAA 1320 GTTTTTATTT GAAAGAGTAG AAGGAGTGTC TAAGGCCACT ATTATAGATC TGGATGCACA 1380 TCAGGGTAAT GGCCATGAGA GAGACTTCAT GGATGATCGT AGGGTGTATA TTATGGATGT 1440 GTACAATAGA TACATTTATC CGGGGGATGG ATTTGCTAAA CGAGCCATAA AGCGGAAGGT 1500 TGAGTTGGAC TGGGGAACAG AGGATACAGA ATATCTTCAG AAGGTACAAA CACACGTGGA 1560 AGGGGCATTA AATGAATTGC GCCCAGACAT TATCGTTTAT AATGCTGGAA CTGATATCTT 1620 GGATGGAGAT CCACTGGGTG GTCTTGCTAT TTCACCTCAG GGGATTGTTA AAAGAGATGA 1680 GGTGGTGTTC AAGGCTGCCA GAAGCCACCG AATCCCTATC TTAATGGTGA CATCTGGAGG 1740 CTACCAGAAG AGGACAGCAC GGATAATTGC TGACTCTATT CTGAATTTGC ACAACCTGGG 1800 GCTTATTGAC AAGGAGCTAG CAACCAGTGA AGCTGAAAAC CCCAAGTGTA ATGTGGAAAA 1860 ACTGGACTGT CCATCACACT TGACTATCCA AAGAACAAGG AAAGCCAGCC CATGGGATTG 1920 TGAGATACTT CTGACANNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1980 NNNNNNNNNN NNNNNN
1997Nucleotide Fasta Sequence
>ENSPSIP00000017189.1|Class-I|Pelodiscus sinensis CGGTTCCCGCCCTGCAGTGTGGGGAGAGCTGCTCAGGCCAGGGCCGGCTCTGCTCGGGCTGCGCCCCTTGCCGTGCAGGCGCCAGGGGCGCGTCGCTAGTGTTGCACGTGGTGACCTTTGCCAGTGTAGTGATCCGAATCGCTTCACAACGTCAGCAACTAATTAATTGCTTCCTATTGTCTTTATTTCCTGTAAGTTACTTGACTGGCCGGCAGTAAGTGTGGGCCTTCACAGTCCGTTGGCATCATTTCCAGTTTAATTTTAAATACTTTTAGGAATAATTTAAATTAAAAAATCCGTTTTCTTTCAAATGGGTTTTCTGAATTCGTCATTTTTCCATGAGGACTTTTTGTGTCTTTGAATTTCTGTCTGTGGTTGTATGAAAGAACCCATGCAAATAGAAGGGGGAAATTGAGTATTAGGGATGTTGAGGGGTGCTTATTTTGTAAATGTGGAACTGCGCTATAGTTCAATGAATACATGTTTACACATGGGGGAGCAGGCAGGAGCTGATGCTCTTGGGGAGCTGGCTTTTAAGCCAACTTCCTGCGAGCGCCATTTCCCACCTGCTCCCTCCATTCCCTGCTCCCGTGATGCTGCCTTTGTGGGAGGCAGCAGTGTGGGGGTGGCAGGTGTCTCCCCATGATTACCAACTCTCACCTGTCCCACTCCCCCGTGTCTGATACAAAGGTAGAGCTGGGGAGGCTGCGCGTAACCGTTAGAATTAACCAAGCCCAGACTCATCAGTTAATCGTGTACATAGCTACACATTCACATGTGGGGTCTGATTCTGGAAAGAACTCTTCTGTATTTTTCCTGTTATATCCAAGAGTTGCCTCACAGAACCGAGCTGTATCATGAAGTCCCACCAACATGCTGGCCTATTGTATATTCTCCAGACTACAACATCACATTTATGGGATTGGAGAAGCTACATCCATTTGATGCAGGGAAATGGGGAAAAGTAATCAATTTCTTAAAAGAAGAAAAACTAATTGCAGACGACTTGATTGTACAGGCACGAGAAGCTACTGAAGATGATTTGTTGGTTGTCCACACAAGACGCTACTTGAATAAATTAAAGTGGTCATTTGTAGTGGCTACAATTACAGAAATTCCTCCAGTTCTCTTTCTTCCCAATTTCCTTGTTCAGAGAAAGGTGCTGAAGCCTCTGAGAATGCAGACAGGAGGAACAATAATGGCGGGAAAACTTGCCATTGACAGAGGCTGGGCAATCAACGTGGGTGGTGGCTTCCATCACTGTTCAAGTGATAAAGGTGGAGGGTTTTGTGCATATGCTGATATCACACTGGCTATTAAGTTTTTATTTGAAAGAGTAGAAGGAGTGTCTAAGGCCACTATTATAGATCTGGATGCACATCAGGGTAATGGCCATGAGAGAGACTTCATGGATGATCGTAGGGTGTATATTATGGATGTGTACAATAGATACATTTATCCGGGGGATGGATTTGCTAAACGAGCCATAAAGCGGAAGGTTGAGTTGGACTGGGGAACAGAGGATACAGAATATCTTCAGAAGGTACAAACACACGTGGAAGGGGCATTAAATGAATTGCGCCCAGACATTATCGTTTATAATGCTGGAACTGATATCTTGGATGGAGATCCACTGGGTGGTCTTGCTATTTCACCTCAGGGGATTGTTAAAAGAGATGAGGTGGTGTTCAAGGCTGCCAGAAGCCACCGAATCCCTATCTTAATGGTGACATCTGGAGGCTACCAGAAGAGGACAGCACGGATAATTGCTGACTCTATTCTGAATTTGCACAACCTGGGGCTTATTGACAAGGAGCTAGCAACCAGTGAAGCTGAAAACCCCAAGTGTAATGTGGAAAAACTGGACTGTCCATCACACTTGACTATCCAAAGAACAAGGAAAGCCAGCCCATGGGATTGTGAGATACTTCTGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |