| Tag |
Content |
| WERAM ID |
WERAM-Orla-0136 |
| Ensembl Protein ID |
ENSORLP00000016174.1 |
| Gene Name |
hdac11 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-IV |
9.30e-156 |
517.8 |
42 |
328 |
| HDAC |
Class-I |
1.90e-24 |
87.1 |
29 |
321 |
|
| Organism |
Oryzias latipes |
| Domain Profile |
HDAC Class-IV
class-4.txt 1 leklhpfdaskwkkvikflkeeklledealveareaskedllvvhtrkylkslksslkvatiteiplvaflpnflvqrkvlrplrlqag 89
leklhpfda+kw+kvi+flkee +l+d +vearea++edllvvht++ylk lk+s++vatiteip++ flpnflvqrkvlrplr+q+g
ENSORLP00000016174.1 42 LEKLHPFDAGKWGKVIHFLKEECFLTDADIVEAREATEEDLLVVHTKHYLKRLKWSVVVATITEIPPLLFLPNFLVQRKVLRPLRTQTG 130
79*************************************************************************************** PP
class-4.txt 90 GtilaaklaverGwainvGGGfhhcsserGGGfcayaditlaikflferlkaisrviiidldahqGnGherdfaddkrvyildvynrei 178
Gti+a+klav+rGwainvGGGfhhcss++GGGfcayaditlaikflfer+++is+++iidldahqGnGherdf +d+rvyi+dvyn++i
ENSORLP00000016174.1 131 GTIMAGKLAVDRGWAINVGGGFHHCSSNKGGGFCAYADITLAIKFLFERVEGISKATIIDLDAHQGNGHERDFLEDRRVYIMDVYNSHI 219
***************************************************************************************** PP
class-4.txt 179 ypkdrvakeairrkvelesgtedeeylekleralkkslqefepdlvvynaGtdvleGdrlGalkispegivkrdevvfrlvrakdipiv 267
yp+d +ak+airrkvel++gted+eyl+k+e + + +l+e +pd++vynaGtd+l+Gd+lG+l+isp+givkrde+vfr +++++ipi+
ENSORLP00000016174.1 220 YPGDGHAKRAIRRKVELDWGTEDSEYLQKVELHCEGALNELRPDIIVYNAGTDILDGDPLGGLSISPQGIVKRDEIVFRAAKQRGIPIL 308
***************************************************************************************** PP
class-4.txt 268 mvtsGGyqkrsarviadsil 287
mvtsGGyqkr+ar+iadsil
ENSORLP00000016174.1 309 MVTSGGYQKRTARIIADSIL 328
******************95 PP
HDAC Class-I
class-1.txt 3 vayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflk.kvepenaeelskelkkfnvge 90
++y+ d +++ + ++ hp ++ + +++ + + +iv++++a+ e+ll +h+++y++ lk +v + + +e++ l
ENSORLP00000016174.1 29 IVYHPDYNITFMGLEKLHPFDAGKWGKVIHFLKEECFLTDADIVEAREATEEDLLVVHTKHYLKRLKwSVVVATITEIPPLLFL----P 113
5677788888888889999999999999999999999999************************99835666666666654433....3 PP
class-1.txt 91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlhhGDgve 176
+ v ++ ++ tG+++ a k L ++ ain GG+hh ++ Gfc Di lai l ++ + id+d h G+g e
ENSORLP00000016174.1 114 NFLVQRKVLRPLRTQTGGTIMAGK-LAV-DRGWAINVGGGFHHCSSNKGGGFCAYADITLAIKFLFErveGISKATIIDLDAHQGNGHE 200
444555666667899*****8765.543.56789****************************99987222456889************* PP
class-1.txt 177 eafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlg 265
f + rv + + y+ + +Pg G+ + k v l+ g +D++y + ++ + ++ +P+++v + G+D l gD+lg
ENSORLP00000016174.1 201 RDFLEDRRVYIMDV--YNSHIYPGDGHAKRAIRRK-------VELDWGTEDSEYLQKVELHCEGALNELRPDIIVYNAGTDILDGDPLG 280
*********98766..88889*****987655444.......689******************************************** PP
class-1.txt 266 efnlsikghae....cvkfvksfnlpllvlGGGGYtlrnvaR 303
++s +g+ + + + k+ +p+l++ GGY++r aR
ENSORLP00000016174.1 281 GLSISPQGIVKrdeiVFRAAKQRGIPILMVTSGGYQKRT-AR 321
********987555445677999************9874.44 PP
|
Protein Sequence
(Fasta) | MSLKEDTRKT SSSHPTNLYT SLPQTCLPIV YHPDYNITFM GLEKLHPFDA GKWGKVIHFL 60
KEECFLTDAD IVEAREATEE DLLVVHTKHY LKRLKWSVVV ATITEIPPLL FLPNFLVQRK 120
VLRPLRTQTG GTIMAGKLAV DRGWAINVGG GFHHCSSNKG GGFCAYADIT LAIKFLFERV 180
EGISKATIID LDAHQGNGHE RDFLEDRRVY IMDVYNSHIY PGDGHAKRAI RRKVELDWGT 240
EDSEYLQKVE LHCEGALNEL RPDIIVYNAG TDILDGDPLG GLSISPQGIV KRDEIVFRAA 300
KQRGIPILMV TSGGYQKRTA RIIADSILNL RQQGLIRGGA GQSEGLPLRA THMESSSGSA 360
GSTSTRE 367Protein Fasta Sequence
>ENSORLP00000016174.1|Class-I|Oryzias latipes
MSLKEDTRKTSSSHPTNLYTSLPQTCLPIVYHPDYNITFMGLEKLHPFDAGKWGKVIHFLKEECFLTDADIVEAREATEEDLLVVHTKHYLKRLKWSVVVATITEIPPLLFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVDRGWAINVGGGFHHCSSNKGGGFCAYADITLAIKFLFERVEGISKATIIDLDAHQGNGHERDFLEDRRVYIMDVYNSHIYPGDGHAKRAIRRKVELDWGTEDSEYLQKVELHCEGALNELRPDIIVYNAGTDILDGDPLGGLSISPQGIVKRDEIVFRAAKQRGIPILMVTSGGYQKRTARIIADSILNLRQQGLIRGGAGQSEGLPLRATHMESSSGSAGSTSTRE |
Nucleotide Sequence
(Fasta) | ATGTCTCTGA AAGAAGATAC AAGAAAAACG AGCAGCTCTC ACCCAACCAA TCTGTATACT 60
AGCCTCCCTC AGACATGCCT ACCCATCGTG TACCACCCAG ACTACAACAT CACCTTCATG 120
GGCTTGGAGA AGCTGCACCC CTTTGATGCA GGAAAATGGG GAAAAGTCAT CCACTTTCTA 180
AAAGAGGAAT GCTTTCTCAC TGATGCTGAC ATCGTGGAAG CCCGTGAAGC CACGGAGGAG 240
GATCTGCTGG TGGTTCACAC CAAACACTAT CTGAAAAGGT TAAAGTGGTC GGTCGTCGTG 300
GCAACCATCA CAGAAATCCC TCCGCTCTTG TTTCTGCCGA ATTTCCTGGT GCAGCGAAAG 360
GTGCTGAGGC CTTTACGGAC GCAAACAGGA GGAACCATCA TGGCTGGAAA ACTGGCTGTT 420
GACCGAGGAT GGGCCATCAA CGTTGGTGGG GGCTTCCATC ACTGCTCCAG TAACAAGGGT 480
GGAGGCTTTT GCGCCTATGC GGACATCACT CTGGCCATCA AGTTTCTGTT TGAGAGAGTG 540
GAAGGCATCT CCAAGGCCAC CATCATCGAT TTAGATGCTC ATCAGGGAAA CGGTCATGAG 600
CGCGACTTCT TGGAGGACAG GCGGGTCTAC ATCATGGACG TGTATAATTC CCACATCTAT 660
CCTGGGGACG GACACGCCAA GCGAGCCATA AGGAGAAAGG TGGAGCTGGA CTGGGGAACC 720
GAAGACTCTG AGTACCTTCA GAAGGTGGAG CTTCACTGCG AGGGTGCACT GAATGAGCTC 780
CGCCCTGACA TCATCGTCTA CAATGCAGGA ACGGACATCC TGGATGGAGA CCCCCTCGGA 840
GGGCTATCCA TATCACCTCA GGGCATTGTG AAGCGGGACG AGATCGTGTT TAGGGCTGCA 900
AAGCAGCGAG GCATCCCCAT ACTGATGGTG ACATCTGGAG GATACCAGAA AAGAACGGCA 960
AGGATCATCG CTGACTCCAT CCTGAACCTG AGGCAGCAGG GCCTGATCAG AGGCGGAGCT 1020
GGACAGAGCG AGGGGCTTCC TCTGAGGGCG ACCCACATGG AGAGCAGCTC TGGGTCAGCT 1080
GGGTCCACTT CCACGCGAGA ATGA
1105Nucleotide Fasta Sequence
>ENSORLP00000016174.1|Class-I|Oryzias latipes
ATGTCTCTGAAAGAAGATACAAGAAAAACGAGCAGCTCTCACCCAACCAATCTGTATACTAGCCTCCCTCAGACATGCCTACCCATCGTGTACCACCCAGACTACAACATCACCTTCATGGGCTTGGAGAAGCTGCACCCCTTTGATGCAGGAAAATGGGGAAAAGTCATCCACTTTCTAAAAGAGGAATGCTTTCTCACTGATGCTGACATCGTGGAAGCCCGTGAAGCCACGGAGGAGGATCTGCTGGTGGTTCACACCAAACACTATCTGAAAAGGTTAAAGTGGTCGGTCGTCGTGGCAACCATCACAGAAATCCCTCCGCTCTTGTTTCTGCCGAATTTCCTGGTGCAGCGAAAGGTGCTGAGGCCTTTACGGACGCAAACAGGAGGAACCATCATGGCTGGAAAACTGGCTGTTGACCGAGGATGGGCCATCAACGTTGGTGGGGGCTTCCATCACTGCTCCAGTAACAAGGGTGGAGGCTTTTGCGCCTATGCGGACATCACTCTGGCCATCAAGTTTCTGTTTGAGAGAGTGGAAGGCATCTCCAAGGCCACCATCATCGATTTAGATGCTCATCAGGGAAACGGTCATGAGCGCGACTTCTTGGAGGACAGGCGGGTCTACATCATGGACGTGTATAATTCCCACATCTATCCTGGGGACGGACACGCCAAGCGAGCCATAAGGAGAAAGGTGGAGCTGGACTGGGGAACCGAAGACTCTGAGTACCTTCAGAAGGTGGAGCTTCACTGCGAGGGTGCACTGAATGAGCTCCGCCCTGACATCATCGTCTACAATGCAGGAACGGACATCCTGGATGGAGACCCCCTCGGAGGGCTATCCATATCACCTCAGGGCATTGTGAAGCGGGACGAGATCGTGTTTAGGGCTGCAAAGCAGCGAGGCATCCCCATACTGATGGTGACATCTGGAGGATACCAGAAAAGAACGGCAAGGATCATCGCTGACTCCATCCTGAACCTGAGGCAGCAGGGCCTGATCAGAGGCGGAGCTGGACAGAGCGAGGGGCTTCCTCTGAGGGCGACCCACATGGAGAGCAGCTCTGGGTCAGCTGGGTCCACTTCCACGCGAGAATGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
