WERAM Information

Tag Content
WERAM ID WERAM-Orla-0101
Ensembl Protein ID ENSORLP00000012576.1
Gene Name prdm1b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000010025.1 ENSORLT00000012577.1 ENSORLP00000012576.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 6.30e-37 126.6 50 160
Organism Oryzias latipes
Domain Profile
  HMT RIZ
               RIZ.txt   6 aessipkeglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLaalq 94 
                           +++++++e +gv++k++i++g++fGP+ G+++++++v + an+k++w+i+ + g+ ++++D+ d +ksnW+ryvn Ars  eqN +a+q
  ENSORLP00000012576.1  50 FSYNTDNEVIGVFSKEYIPQGTRFGPLRGDIYTKDNVPKEANRKYFWRIY-SGGKLQHFIDGYDVHKSNWMRYVNPARSPTEQNTVACQ 137
                           678899999*****************************************.88999999****************************** PP
               RIZ.txt  95 ineqifYktikdIepdeELLvwy 117
                           ++++i+++t++++ep +ELLvwy
  ENSORLP00000012576.1 138 NGRDIYFYTMRPVEPKQELLVWY 160
                           *********************** PP
Protein Sequence
(Fasta)		MKLESALGDM SSWREVDFAL NCTYIVPDQV SDPSFSLPKA MTSIPRNLSF SYNTDNEVIG 60
VFSKEYIPQG TRFGPLRGDI YTKDNVPKEA NRKYFWRIYS GGKLQHFIDG YDVHKSNWMR 120
YVNPARSPTE QNTVACQNGR DIYFYTMRPV EPKQELLVWY SKEFSQRLCS QQDQLTHRQK 180
IRNFLENCQQ RKTVQTHASQ SKKPSSEGGE EEEECAKRDL NRLAWTTDKE QRADEEKIDV 240
EMLDRDTPPD TPDDQIMDFS KKVEMKDAET WGVLPPPHIG HRGLGQAYLP EQQLQSASGN 300
LPLHLHGLYG HREGLVSSYP LYPQSRPLQP SYQFLSPYHY PRLLLPACSP PFPGMLPSRG 360
ALQYGGYLSA DRLPYPPIVP PTLLPMSIPY APSTQGGLKE QTPNVSPPRG SPATPELSPL 420
AKPSSHLLTP EPSPSGCEEA MNLSMTKSGT APRNGPGHKS LPYPLKKQNG KIKYECNICS 480
KTFGQLSNLK VHLRVHSGER PFQCDLCKKS FTQLAHLQKH HLVHTGEKPH ECQVCHKRFS 540
STSNLKTHLR LHSGEKPYQC KLCNTKFTQY IHLKLHRRLH SSQDRPNRCQ RCTQAFFHRF 600
SLCIHQTSCC PAGPGANPRT SEMVERFDAS QEAAALPE 638
Nucleotide Sequence
(Fasta)		ACTCAGAGTC TGGAACACGT CGACTACCAA CCATGAAGCT GGAGAGCGCA CTGGGAGACA 60
TGAGCAGCTG GAGAGAGGTG GACTTCGCTC TCAACTGCAC CTACATTGTC CCAGACCAAG 120
TGTCGGACCC GAGTTTTAGC CTGCCCAAAG CCATGACCTC CATCCCCCGA AACCTCAGCT 180
TCAGCTACAA CACGGACAAC GAGGTGATAG GTGTGTTCAG CAAGGAGTAC ATCCCTCAGG 240
GCACCCGCTT CGGACCCCTG CGTGGAGACA TCTACACTAA AGACAACGTC CCCAAAGAGG 300
CTAACAGGAA ATACTTCTGG AGGATCTACA GCGGCGGCAA GCTGCAGCAC TTCATTGATG 360
GCTACGACGT CCACAAGAGC AACTGGATGC GTTACGTGAA CCCGGCACGC TCCCCGACGG 420
AGCAGAACAC GGTGGCGTGC CAGAACGGCC GGGACATTTA CTTCTACACC ATGCGGCCCG 480
TGGAGCCCAA ACAGGAGCTG CTGGTGTGGT ACAGCAAGGA GTTCAGCCAG CGGCTGTGCA 540
GCCAGCAGGA CCAGCTGACC CACAGGCAAA AAATAAGAAA TTTTCTTGAA AACTGTCAGC 600
AGAGGAAGAC AGTTCAAACA CACGCCAGTC AGAGTAAAAA ACCGTCCTCT GAGGGAGGAG 660
AGGAGGAAGA GGAGTGCGCC AAAAGGGACC TAAACCGGCT GGCGTGGACC ACAGACAAGG 720
AGCAGAGGGC AGACGAGGAG AAGATAGACG TGGAAATGCT GGATAGAGAC ACTCCTCCGG 780
ACACGCCTGA CGACCAGATC ATGGACTTCA GCAAAAAGGT GGAGATGAAG GACGCAGAAA 840
CCTGGGGGGT CCTCCCCCCG CCCCACATTG GACACAGAGG CTTGGGCCAG GCGTATTTGC 900
CGGAGCAGCA GCTGCAAAGC GCGTCTGGGA ATCTCCCCCT ACACCTCCAC GGGCTCTATG 960
GTCACAGGGA GGGCCTGGTC TCCTCTTACC CCCTCTACCC CCAGTCCAGA CCGCTCCAGC 1020
CCTCCTACCA GTTCCTGTCC CCGTACCACT ATCCCCGCCT CCTCCTGCCC GCCTGTTCTC 1080
CACCCTTCCC TGGGATGCTC CCCTCAAGAG GGGCCCTCCA ATACGGCGGC TACCTGAGCG 1140
CCGACAGACT GCCATACCCC CCGATCGTCC CTCCGACCCT GCTCCCCATG TCCATCCCTT 1200
ATGCTCCGTC CACACAAGGG GGCCTGAAGG AACAGACGCC CAACGTCTCG CCGCCGAGGG 1260
GCTCCCCGGC CACGCCAGAG CTGTCTCCTC TCGCCAAACC AAGCAGTCAC CTGCTGACCC 1320
CCGAGCCGTC GCCCTCCGGC TGCGAGGAAG CCATGAACCT CAGCATGACC AAAAGTGGCA 1380
CGGCGCCGCG AAATGGACCG GGCCACAAGT CCCTGCCCTA CCCGCTAAAG AAGCAGAACG 1440
GGAAGATCAA GTACGAGTGC AACATCTGCT CCAAGACCTT CGGACAGCTT TCCAACCTCA 1500
AGGTCCACCT GCGAGTGCAC AGCGGCGAGC GGCCGTTCCA GTGCGACCTG TGCAAAAAGA 1560
GCTTCACCCA GCTTGCACAC CTACAGAAGC ACCACCTGGT CCACACCGGA GAAAAGCCAC 1620
ACGAATGCCA GGTGTGCCAC AAACGCTTCA GCAGCACCAG CAACCTGAAG ACGCACCTGC 1680
GGCTCCACTC TGGAGAGAAG CCTTACCAAT GCAAGCTGTG CAACACCAAG TTTACGCAGT 1740
ACATCCACCT CAAGCTGCAC CGCCGCCTCC ACAGCAGCCA GGACCGCCCC AACCGCTGCC 1800
AGCGCTGCAC CCAGGCCTTT TTCCACCGCT TCTCCCTCTG CATCCACCAG ACCAGCTGCT 1860
GTCCAGCCGG CCCCGGCGCC AACCCGCGCA CCAGCGAGAT GGTGGAGCGC TTCGACGCCA 1920
GCCAGGAGGC CGCCGCTCTG CCCGAA 1947
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Xim-0207 ENSXMAP00000016799.1 Xiphophorus maculatus 73 0.0 879
WERAM-Tar-0068 ENSTRUP00000013557.1 Takifugu rubripes 71 0.0 865
WERAM-Orn-0164 ENSONIP00000017081.1 Oreochromis niloticus 67 0.0 833
WERAM-Gaa-0023 ENSGACP00000003553.1 Gasterosteus aculeatus 67 0.0 818
WERAM-Pof-0037 ENSPFOP00000003054.2 Poecilia formosa 66 0.0 815
WERAM-Ten-0207 ENSTNIP00000020889.1 Tetraodon nigroviridis 66 0.0 784
WERAM-Leo-0172 ENSLOCP00000020417.1 Lepisosteus oculatus 43 3e-132 469
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 48 1e-81 301
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 48 2e-81 300
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 48 7e-81 299
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 48 7e-81 299
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 48 1e-80 298
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 62 4e-80 296
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 59 1e-79 295
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 48 1e-78 291
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 47 1e-78 291
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 58 6e-78 289
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 62 6e-78 289
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 61 7e-78 289
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 50 1e-77 288
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 62 1e-77 288
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 58 3e-77 286
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 62 4e-77 286
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 62 4e-77 286
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 47 4e-77 286
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 47 6e-77 286
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 58 7e-77 285
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 60 7e-77 285
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 47 1e-76 285
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 57 1e-76 285
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 57 1e-76 285
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 60 1e-76 285
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 57 1e-76 285
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 60 2e-76 284
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 62 2e-76 284
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 57 3e-76 283
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 57 4e-76 283
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 61 1e-75 281
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 60 1e-75 281
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 59 2e-75 281
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 61 2e-75 281
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 61 2e-75 280
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 61 2e-75 280
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 61 2e-75 280
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 61 2e-75 280
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 61 2e-75 280
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 71 4e-75 280
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 61 5e-75 280
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 55 4e-74 276
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 60 2e-73 274
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 68 4e-73 273
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 61 6e-73 273
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 67 4e-72 270
WERAM-Lac-0165 ENSLACP00000019582.1 Latimeria chalumnae 63 7e-60 229
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 60 2e-57 221
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 60 3e-57 220
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 59 4e-57 220
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 59 2e-56 218
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 59 1e-55 215
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 37 8e-27 119
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 35 8e-21 99.8
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 36 4e-20 97.4
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 40 4e-20 97.4
Created Date 25-Jun-2016