WERAM Information

Tag Content
WERAM ID WERAM-Orla-0034
Ensembl Protein ID ENSORLP00000004746.1
Gene Name hdac12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000003813.1 ENSORLT00000004747.1 ENSORLP00000004746.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.10e-07 31.1 68 171
Organism Oryzias latipes
Domain Profile
  HDAC Class-I
           class-1.txt  34 vlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkLnkkead 122
                           +l+ ++  + ++  p+ as++ l+ +h+e+y++ + + +++++e+           +  P  +g+ + c+  tG+++ aa+     ++ 
  ENSORLP00000004746.1  68 LLKDQVITEKQVWVPEIASRDLLSCVHTEDYLNKFLSGKTSEQEQRR---------TGFPWSEGIVSRCRYETGGTVLAAEAA--LQRG 145
                           44445556668888889999999999999998765554444433333.........356999***************999864..4678 PP
           class-1.txt 123 iainwaGGlhhakkseasGfcyvnDi 148
                           +a   aGG hha+    sGfc +nD+
  ENSORLP00000004746.1 146 LACSTAGGTHHAFPGYGSGFCLLNDL 171
                           999**********************7 PP
Protein Sequence
(Fasta)		MTGLKRVFCK NPRLTELVRN GLCRCFHAEH VRLESSGLPI IHHSKYVCEL PANHRFPMGK 60
FPRVLHFLLK DQVITEKQVW VPEIASRDLL SCVHTEDYLN KFLSGKTSEQ EQRRTGFPWS 120
EGIVSRCRYE TGGTVLAAEA ALQRGLACST AGGTHHAFPG YGSGFCLLND LA 172
Nucleotide Sequence
(Fasta)		CGAACGTTTG TGCTTTCATA ACGCCTGAAA GGGTTTTCAT ACCTTATATA ACAGGGAAAC 60
TCGTTCAGCA TCAGACAGAA ATGACCGGCC TGAAGAGGGT TTTTTGTAAA AACCCGCGCT 120
TGACAGAGCT TGTGCGAAAT GGGCTTTGTA GATGTTTCCA CGCTGAACAC GTGAGGCTCG 180
AGTCCAGTGG ACTTCCCATA ATTCATCACA GCAAGTATGT ATGCGAGCTC CCAGCCAACC 240
ACAGGTTTCC AATGGGCAAG TTCCCTCGGG TTTTACACTT TTTGCTTAAA GACCAAGTTA 300
TCACAGAAAA ACAAGTGTGG GTCCCTGAAA TCGCCTCCAG AGATCTGCTG AGCTGCGTGC 360
ACACGGAGGA CTATCTGAAC AAGTTCCTAA GTGGGAAAAC AAGTGAGCAA GAACAGAGGA 420
GAACAGGCTT TCCCTGGAGT GAGGGCATAG TCTCACGCTG TCGATACGAA ACGGGTGGGA 480
CCGTTCTGGC TGCTGAAGCT GCTCTGCAGA GAGGTCTGGC ATGCAGCACA GCAGGAGGAA 540
CCCATCATGC TTTTCCCGGC TACGGCTCAG GGTTTTGTCT GCTCAATGAC TTAGCG 597
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pof-0016 ENSPFOP00000001444.2 Poecilia formosa 81 4e-79 290
WERAM-Xim-0076 ENSXMAP00000007002.1 Xiphophorus maculatus 80 5e-79 290
WERAM-Gaa-0118 ENSGACP00000015262.1 Gasterosteus aculeatus 83 5e-77 283
WERAM-Lac-0085 ENSLACP00000010878.1 Latimeria chalumnae 78 6e-62 233
WERAM-Gam-0043 ENSGMOP00000004756.1 Gadus morhua 70 2e-61 231
WERAM-Leo-0077 ENSLOCP00000010093.1 Lepisosteus oculatus 71 3e-57 218
WERAM-Tar-0078 ENSTRUP00000015330.1 Takifugu rubripes 67 4e-54 207
WERAM-Cym-0025 CMQ158CT Cyanidioschyzon merolae 38 4e-28 121
WERAM-Chr-0005 EDP03778 Chlamydomonas reinhardtii 44 2e-25 112
WERAM-Osl-0038 ABO99879 Ostreococcus lucimarinus 41 2e-24 108
WERAM-Php-0087 PP1S34_438V6.1 Physcomitrella patens 43 2e-22 102
WERAM-Dar-0212 ENSDARP00000129931.1 Danio rerio 76 5e-15 77.8
WERAM-Arl-0095 fgenesh2_kg.6__ 2585__ AT5G26040.2 Arabidopsis lyrata 34 5e-13 71.2
WERAM-Art-0129 AT5G26040.2 Arabidopsis thaliana 33 5e-13 70.9
WERAM-Brr-0052 Bra009877.1-P Brassica rapa 34 5e-13 70.9
WERAM-Viv-0015 VIT_04s0008g00910.t01 Vitis vinifera 33 6e-13 70.9
WERAM-Thc-0103 EOY29884 Theobroma cacao 33 8e-13 70.5
WERAM-Bro-0132 Bo7g095520.1 Brassica oleracea 34 1e-12 70.1
WERAM-Sob-0067 Sb04g007780.1 Sorghum bicolor 31 1e-12 69.7
WERAM-Cis-0041 ENSCSAVP00000009072.1 Ciona savignyi 30 2e-12 68.9
WERAM-Pes-0146 ENSPSIP00000017189.1 Pelodiscus sinensis 31 4e-12 68.2
WERAM-Pot-0080 POPTR_0006s24640.1 Populus trichocarpa 31 4e-12 68.2
WERAM-Anc-0120 ENSACAP00000011278.3 Anolis carolinensis 29 4e-12 67.8
WERAM-Met-0014 AES59273 Medicago truncatula 30 7e-12 67.4
WERAM-Sol-0102 Solyc08g065350.2.1 Solanum lycopersicum 32 1e-11 66.6
WERAM-Pem-0019 ENSPMAP00000002586.1 Petromyzon marinus 31 1e-11 66.2
WERAM-Ocp-0102 ENSOPRP00000009462.1 Ochotona princeps 31 1e-11 66.2
WERAM-Glm-0229 GLYMA17G34770.1 Glycine max 32 2e-11 65.9
WERAM-Sah-0048 ENSSHAP00000005466.1 Sarcophilus harrisii 31 2e-11 65.5
WERAM-Prp-0064 EMJ26901 Prunus persica 31 2e-11 65.5
WERAM-Cap-0083 ENSCPOP00000005971.2 Cavia porcellus 30 3e-11 65.1
WERAM-Tag-0056 ENSTGUP00000003927.1 Taeniopygia guttata 30 3e-11 65.1
WERAM-Mum-0132 ENSMUSP00000043828.4 Mus musculus 30 5e-11 64.3
WERAM-Anp-0099 ENSAPLP00000011801.1 Anas platyrhynchos 30 5e-11 64.3
WERAM-Gaga-0055 ENSGALP00000008151.4 Gallus gallus 30 5e-11 64.3
WERAM-Ran-0042 ENSRNOP00000008962.5 Rattus norvegicus 30 5e-11 64.3
WERAM-Meg-0057 ENSMGAP00000005254.2 Meleagris gallopavo 30 5e-11 64.3
WERAM-Orc-0095 ENSOCUP00000008476.2 Oryctolagus cuniculus 30 6e-11 64.3
WERAM-Otg-0083 ENSOGAP00000006490.2 Otolemur garnettii 29 6e-11 63.9
WERAM-Sus-0193 ENSSSCP00000027544.1 Sus scrofa 30 7e-11 63.9
WERAM-Gog-0090 ENSGGOP00000007570.2 Gorilla gorilla 30 7e-11 63.9
WERAM-Hos-0174 ENSP00000295757.3 Homo sapiens 30 8e-11 63.9
WERAM-Paa-0195 ENSPANP00000003035.1 Papio anubis 30 8e-11 63.5
WERAM-Chs-0115 ENSCSAP00000005710.1 Chlorocebus sabaeus 29 8e-11 63.5
WERAM-Mam-0008 ENSMMUP00000001824.2 Macaca mulatta 29 8e-11 63.5
WERAM-Poa-0118 ENSPPYP00000014982.2 Pongo abelii 30 9e-11 63.5
WERAM-Myl-0189 ENSMLUP00000015766.2 Myotis lucifugus 30 1e-10 63.2
WERAM-Dio-0089 ENSDORP00000009107.1 Dipodomys ordii 30 1e-10 63.2
WERAM-Mim-0127 ENSMICP00000012962.1 Microcebus murinus 30 1e-10 63.2
WERAM-Loa-0005 ENSLAFP00000000421.3 Loxodonta africana 30 1e-10 63.2
WERAM-Sei-0028 Si006784m Setaria italica 30 1e-10 62.8
WERAM-Aim-0104 ENSAMEP00000010054.1 Ailuropoda melanoleuca 29 1e-10 62.8
WERAM-Brd-0021 BRADI1G37510.1 Brachypodium distachyon 30 1e-10 62.8
WERAM-Ors-0058 OS06T0571100-01 Oryza sativa 29 1e-10 62.8
WERAM-Orr-0066 ORUFI06G20130.1 Oryza rufipogon 29 1e-10 62.8
WERAM-Orni-0064 ONIVA06G22840.1 Oryza nivara 29 1e-10 62.8
WERAM-Ori-0066 BGIOSGA021002-PA Oryza indica 29 1e-10 62.8
WERAM-Org-0062 ORGLA06G0157900.1 Oryza glaberrima 29 1e-10 62.8
WERAM-Orb-0065 OBART06G18360.1 Oryza barthii 29 1e-10 62.8
WERAM-Orgl-0063 OGLUM06G20210.1 Oryza glumaepatula 28 2e-10 62.8
WERAM-Mae-0056 ENSMEUP00000005580.1 Macropus eugenii 29 2e-10 62.8
WERAM-Tut-0131 ENSTTRP00000010611.1 Tursiops truncatus 30 2e-10 62.4
WERAM-Ict-0088 ENSSTOP00000009419.2 Ictidomys tridecemlineatus 30 2e-10 62.4
WERAM-Eqc-0015 ENSECAP00000002522.1 Equus caballus 29 2e-10 62.4
WERAM-Ptv-0049 ENSPVAP00000005253.1 Pteropus vampyrus 29 2e-10 62.4
WERAM-Mup-0199 ENSMPUP00000017162.1 Mustela putorius furo 30 2e-10 62.0
WERAM-Tra-0305 Traes_7BL_61CFBC1F9.2 Triticum aestivum 32 3e-10 62.0
WERAM-Orn-0036 ENSONIP00000004088.1 Oreochromis niloticus 34 3e-10 62.0
WERAM-Nol-0049 ENSNLEP00000005908.2 Nomascus leucogenys 31 3e-10 61.6
WERAM-Hov-0085 MLOC_6441.1 Hordeum vulgare 31 4e-10 61.2
WERAM-Cae-0036 C35A5.9 Caenorhabditis elegans 30 4e-10 61.2
WERAM-Tru-0023 TRIUR3_12206-P1 Triticum urartu 35 5e-10 61.2
WERAM-Zem-0011 GRMZM2G008425_P01 Zea mays 30 5e-10 60.8
WERAM-Caf-0054 ENSCAFP00000006551.3 Canis familiaris 31 7e-10 60.5
WERAM-Fec-0086 ENSFCAP00000006953.3 Felis catus 31 7e-10 60.5
WERAM-Mod-0065 ENSMODP00000010728.2 Monodelphis domestica 32 1e-09 59.7
WERAM-Bot-0074 ENSBTAP00000009482.5 Bos taurus 29 1e-09 59.7
WERAM-Xet-0128 ENSXETP00000044353.3 Xenopus tropicalis 30 4e-09 58.2
WERAM-Orm-0062 OMERI06G19350.1 Oryza meridionalis 29 4e-09 57.8
WERAM-Ova-0011 ENSOARP00000001712.1 Ovis aries 30 1e-08 56.2
WERAM-Orbr-0073 OB06G26590.1 Oryza brachyantha 33 1e-08 56.2
WERAM-Kop-0017 CAY69921 Komagataella pastoris 30 3e-08 55.1
WERAM-Mua-0015 GSMUA_Achr10P28050_001 Musa acuminata 30 5e-08 54.7
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 32 8e-08 53.5
WERAM-Aet-0055 EMT26973 Aegilops tauschii 32 1e-07 53.5
WERAM-Cii-0063 ENSCINP00000027979.2 Ciona intestinalis 33 1e-07 53.1
WERAM-Soa-0061 ENSSARP00000006024.1 Sorex araneus 32 1e-07 52.8
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 32 2e-07 52.8
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 33 2e-07 52.8
WERAM-Sem-0048 EFJ15307 Selaginella moellendorffii 27 2e-07 52.4
WERAM-Ora-0012 ENSOANP00000001904.1 Ornithorhynchus anatinus 32 2e-07 52.4
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 32 3e-07 51.6
WERAM-Fia-0001 ENSFALP00000000041.1 Ficedula albicollis 33 4e-07 51.6
WERAM-Coi-0024 EAS33504 Coccidioides immitis 32 4e-07 51.6
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 32 4e-07 51.6
WERAM-Amt-0082 ERN02510 Amborella trichopoda 36 5e-07 51.2
WERAM-Scj-0003 EEB05565 Schizosaccharomyces japonicus 31 5e-07 50.8
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 31 2e-06 49.3
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 31 2e-06 49.3
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 31 2e-06 49.3
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 31 2e-06 49.3
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 32 4e-06 48.1
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 30 4e-06 48.1
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 32 4e-06 48.1
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 30 4e-06 48.1
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 31 5e-06 47.8
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 31 5e-06 47.8
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 32 6e-06 47.4
WERAM-Usm-0008 UM01352P0 Ustilago maydis 32 7e-06 47.4
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 30 8e-06 47.0
Created Date 25-Jun-2016