WERAM Information

Tag Content
WERAM ID WERAM-Orc-0152
Ensembl Protein ID ENSOCUP00000013310.2
Gene Name PRDM1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSOCUG00000015495.3 ENSOCUT00000015492.2 ENSOCUP00000013310.2
ENSOCUG00000015495.3 ENSOCUT00000034074.1 ENSOCUP00000027123.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 2.20e-41 140.7 145 258
Organism Oryctolagus cuniculus
Domain Profile
  HMT RIZ
               RIZ.txt   5 laessip.keglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLaa 92 
                           l+++s + ke +gv +k++i+kg++fGP++Ge++++++v +nan+k++w+i+ ++ge ++++D+ +eeksnW+ryvn A+s +eqNLaa
  ENSOCUP00000013310.2 145 LFKYSSNsKEVIGVVSKEYIPKGTRFGPLIGEIYTNDTVPKNANRKYFWRIY-SRGELHHFIDGFNEEKSNWMRYVNPAHSAREQNLAA 232
                           45555440556*****************************************.9*********************************** PP
               RIZ.txt  93 lqineqifYktikdIepdeELLvwyk 118
                           +q++++++++tik+I++ +ELLvwy+
  ENSOCUP00000013310.2 233 CQNGMNVYFYTIKPIPASQELLVWYC 258
                           *************************6 PP
Protein Sequence
(Fasta)		RAGESPGPAR LRRVQVPPVA TPPLQAAGSS ESAVRLSPPA GTRARCGLAR REPDASPMLD 60
ICLEKPVGTT LAAPKCSSGA VTAQELAEGT EGTMKMDMED ADMTLWTETE FEEKCTYIVN 120
DHPWESGPEG GTAVQAEASL PRNLLFKYSS NSKEVIGVVS KEYIPKGTRF GPLIGEIYTN 180
DTVPKNANRK YFWRIYSRGE LHHFIDGFNE EKSNWMRYVN PAHSAREQNL AACQNGMNVY 240
FYTIKPIPAS QELLVWYCRD FAGRLHYPYP GELTVMNLTQ TPSNPKQLST ENELCPRSVP 300
KREHSVKEIL KLDSNPCKGK DLYRSSISPL AFEKDADGFR TNGSPDVPFY PRVVYPIRAP 360
LPEDFLKASL AYGMERPTYI THSPIPSSTT PSPSAGSSPD PSLKSSSPHS SPGNTVSPLA 420
PGSQDLRDSY TYLNTPYGAS EGLGSYPGYA PGPHLPPAFI PSYNAHYPKF LLPPYGMNCN 480
GLSAVSNISG ISNFGLFPRL YPVYSNLLGG GNLPHPMLAP ASLPSSLPSE GARGLLQPEH 540
PREVLVPAPH SAFSLTGAAA SMKDKTCSPT SGSPTAGTAA TSEHVVQPKA TSAAMSDEAM 600
NLIKNKRNMT GYKTLPYPLK KQNGKIKYEC NVCAKTFGQL SNLKVHLRVH SGERPFKCQT 660
CNKGFTQLAH LQKHYLVHTG EKPHECQVCH KRFSSTSNLK THLRLHSGEK PYQCKVCPAK 720
FTQFVHLKLH KRLHTRERPH KCAQCQKSYI HLCSLRVHLK GNCPMAPAPG LPLEDLTRIN 780
EEIEKFDISD NADRLEDVED SVDVTSVVEK EILAVVSKEK EETGLKASLQ RNVGSGLLSS 840
GCGLYESSEL TLLKLPRTNP LPLVPVKVKQ ETVEPMDP 878
Nucleotide Sequence
(Fasta)		CGAGCCGGGG AAAGCCCTGG GCCGGCGCGG CTCCGGCGAG TCCAGGTGCC TCCAGTGGCC 60
ACGCCCCCAC TCCAGGCAGC TGGCAGCAGT GAATCAGCAG TGCGGCTCAG CCCGCCCGCC 120
GGGACGCGGG CGCGATGTGG GCTGGCGAGA CGTGAGCCCG ACGCCTCTCC GATGTTGGAT 180
ATTTGCTTGG AAAAACCTGT GGGGACGACC TTGGCTGCCC CCAAGTGCAG CTCCGGCGCT 240
GTGACGGCTC AAGAGTTGGC AGAGGGCACC GAGGGGACCA TGAAAATGGA CATGGAGGAC 300
GCGGACATGA CTCTGTGGAC AGAGACTGAG TTTGAGGAGA AGTGCACGTA CATTGTGAAT 360
GACCACCCTT GGGAGTCCGG CCCCGAGGGA GGGACCGCCG TGCAGGCCGA GGCGTCCTTG 420
CCCAGGAATC TGCTCTTCAA GTACTCCAGC AACAGCAAAG AGGTTATTGG AGTTGTCAGT 480
AAGGAGTACA TCCCGAAGGG CACACGATTT GGACCCTTAA TAGGAGAAAT CTACACCAAC 540
GATACAGTTC CTAAGAATGC CAACAGGAAA TATTTTTGGC GGATCTATTC CAGAGGGGAG 600
CTCCACCACT TCATCGACGG CTTTAATGAG GAGAAAAGCA ACTGGATGCG CTACGTGAAT 660
CCAGCGCACT CTGCCCGGGA GCAAAACCTG GCTGCGTGTC AGAACGGGAT GAATGTCTAC 720
TTTTACACCA TTAAGCCTAT CCCTGCCAGC CAGGAACTCC TTGTGTGGTA TTGTCGGGAC 780
TTCGCGGGAA GGCTGCACTA CCCTTATCCT GGAGAGCTGA CAGTGATGAA TCTCACCCAA 840
ACGCCGAGCA ACCCAAAGCA GCTGAGCACT GAGAATGAAC TCTGCCCCAG GAGTGTCCCA 900
AAGAGAGAGC ACAGTGTGAA GGAAATCCTC AAGCTGGACT CGAACCCCTG CAAAGGCAAG 960
GACCTCTACC GTTCCAGCAT CTCCCCGCTC GCTTTCGAGA AGGACGCCGA CGGCTTCCGA 1020
ACAAACGGGA GCCCCGACGT GCCCTTCTAC CCCCGGGTGG TCTACCCGAT CCGCGCCCCT 1080
CTCCCTGAAG ACTTTCTCAA AGCCTCACTG GCCTACGGGA TGGAGAGACC CACCTACATC 1140
ACTCACTCCC CCATCCCGTC CTCCACGACG CCGAGCCCCT CGGCCGGAAG CAGCCCCGAC 1200
CCAAGCCTCA AGAGCTCCAG CCCCCACAGC AGCCCGGGCA ACACCGTGTC CCCGCTGGCT 1260
CCCGGCTCCC AAGACCTCCG GGACTCCTAC ACTTACTTGA ACACACCCTA CGGCGCCAGC 1320
GAAGGTTTGG GCTCCTACCC GGGCTACGCG CCCGGCCCAC ACCTGCCGCC AGCCTTCATC 1380
CCCTCTTACA ACGCTCACTA CCCCAAGTTC CTGCTCCCGC CTTATGGCAT GAATTGTAAC 1440
GGCCTGAGCG CCGTGAGCAA CATCAGTGGC ATCAGCAATT TCGGCCTCTT CCCGAGGCTG 1500
TACCCCGTCT ACAGTAACCT CCTGGGTGGG GGGAACCTGC CGCACCCCAT GCTCGCCCCA 1560
GCTTCTCTCC CGAGCTCACT GCCCTCCGAG GGAGCCCGGG GATTGCTGCA GCCCGAGCAC 1620
CCGCGAGAGG TGCTTGTCCC GGCCCCCCAC AGTGCCTTTT CCCTCACCGG GGCGGCCGCC 1680
AGCATGAAGG ACAAGACGTG CAGCCCTACC AGCGGCTCTC CAACAGCGGG CACTGCGGCC 1740
ACGTCCGAAC ACGTGGTACA ACCCAAAGCT ACCTCAGCAG CCATGAGCGA TGAAGCCATG 1800
AATCTCATCA AGAACAAGAG GAACATGACC GGCTACAAGA CGCTGCCCTA CCCACTGAAG 1860
AAGCAGAATG GCAAGATTAA GTACGAGTGC AACGTGTGCG CCAAGACGTT CGGGCAGCTC 1920
TCAAATCTAA AGGTCCATCT GAGAGTGCAC AGCGGCGAAC GGCCTTTCAA ATGTCAGACG 1980
TGCAACAAGG GCTTCACCCA GCTCGCCCAC CTGCAGAAAC ACTACCTGGT GCACACGGGA 2040
GAAAAGCCGC ATGAATGCCA GGTCTGCCAC AAGCGATTTA GCAGCACCAG CAATCTAAAG 2100
ACACACCTGC GACTGCACTC CGGGGAGAAA CCTTACCAGT GCAAGGTGTG CCCTGCCAAG 2160
TTCACCCAGT TCGTGCACCT GAAGCTGCAT AAGCGCCTCC ACACCCGGGA GCGGCCCCAC 2220
AAGTGCGCCC AGTGCCAGAA GAGCTACATC CATCTCTGCA GCCTGAGGGT CCACCTGAAG 2280
GGCAACTGCC CCATGGCCCC CGCCCCCGGG CTGCCCTTGG AGGATCTGAC TCGAATCAAC 2340
GAAGAGATCG AGAAGTTTGA CATCAGCGAC AACGCGGACC GGCTCGAGGA CGTGGAGGAC 2400
AGCGTGGACG TGACCTCCGT GGTGGAGAAG GAGATTCTGG CCGTGGTCAG CAAAGAGAAA 2460
GAGGAAACTG GCCTGAAAGC GTCTTTGCAA AGAAATGTGG GGAGCGGACT CCTGTCCTCG 2520
GGGTGTGGTC TGTATGAGTC ATCAGAGCTG ACGCTCCTGA AGCTGCCTCG CACCAACCCA 2580
CTACCTCTGG TACCGGTAAA GGTCAAACAA GAAACAGTGG AACCCATGGA TCCTTAA 2638
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 90 0.0 1325
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 90 0.0 1325
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 89 0.0 1322
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 90 0.0 1321
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 89 0.0 1320
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 89 0.0 1319
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 89 0.0 1316
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 89 0.0 1314
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 89 0.0 1314
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 89 0.0 1309
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 89 0.0 1305
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 89 0.0 1280
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 88 0.0 1279
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 86 0.0 1273
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 88 0.0 1257
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 86 0.0 1253
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 87 0.0 1251
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 86 0.0 1248
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 88 0.0 1230
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 85 0.0 1224
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 85 0.0 1221
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 87 0.0 1219
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 88 0.0 1218
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 87 0.0 1215
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 85 0.0 1211
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 85 0.0 1197
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 81 0.0 1173
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 84 0.0 1155
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 82 0.0 1142
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 78 0.0 1141
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 78 0.0 1133
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 78 0.0 1122
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 78 0.0 1121
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 78 0.0 1119
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 79 0.0 1110
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 78 0.0 1110
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 77 0.0 1101
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 76 0.0 1087
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 76 0.0 1042
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 75 0.0 1035
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 72 0.0 1031
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 75 0.0 1011
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 68 0.0 917
WERAM-Leo-0172 ENSLOCP00000020417.1 Lepisosteus oculatus 64 0.0 890
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 52 0.0 720
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 51 0.0 711
WERAM-Orn-0077 ENSONIP00000008446.1 Oreochromis niloticus 48 0.0 672
WERAM-Pof-0225 ENSPFOP00000018402.1 Poecilia formosa 47 0.0 668
WERAM-Xim-0163 ENSXMAP00000013381.1 Xiphophorus maculatus 50 0.0 654
WERAM-Tar-0004 ENSTRUP00000000947.1 Takifugu rubripes 50 0.0 645
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 87 0.0 642
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 86 1e-166 584
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 86 3e-148 523
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 83 4e-144 509
WERAM-Lac-0194 ENSLACP00000022113.1 Latimeria chalumnae 80 7e-86 316
WERAM-Gaa-0096 ENSGACP00000012338.1 Gasterosteus aculeatus 69 1e-84 312
WERAM-Ten-0146 ENSTNIP00000015268.1 Tetraodon nigroviridis 69 2e-84 311
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 63 2e-75 281
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 65 1e-52 205
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 38 5e-29 127
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 38 1e-23 109
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 37 7e-23 107
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 39 7e-19 94.0
Created Date 25-Jun-2016