WERAM Information

Tag Content
WERAM ID WERAM-Leo-0172
Ensembl Protein ID ENSLOCP00000020417.1
Gene Name prdm1a
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLOCG00000016531.1 ENSLOCT00000020452.1 ENSLOCP00000020417.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 4.30e-41 139.9 18 196
Organism Lepisosteus oculatus
Domain Profile
  HMT RIZ
               RIZ.txt 49 kliweisedkgevkyivDasdeeksnWl 76
                           l +e s+++ge ++ +D +d++ + W 
  ENSLOCP00000020417.1 18 ILTAEESQETGEFTMKMDVEDADMTKWT 45
                          4566777888888899999999999995 PP
               RIZ.txt  12 keglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLaalqineqif 100
                           ke +gv +k++i+kg++fGP+vGe +++e+v +nan+k++w+i+  +ge +++vD+ +eeksnW+ryvn A+s++eqNLaa+q++++i+
  ENSLOCP00000020417.1  91 KEVIGVTSKEYIPKGTRFGPLVGESYTTETVPKNANRKYFWRIY-CNGEFHHFVDGFNEEKSNWMRYVNPAHSQQEQNLAACQNGMNIY 178
                           4559****************************************.9999**************************************** PP
               RIZ.txt 101 YktikdIepdeELLvwyk 118
                           ++t+k+I++++ELLvwy+
  ENSLOCP00000020417.1 179 FYTVKPIPANQELLVWYC 196
                           *****************6 PP
Protein Sequence
(Fasta)		MCGSTQSFPA ATQHSSDILT AEESQETGEF TMKMDVEDAD MTKWTELEFE EKCTYIVKDH 60
PWESSTDSGS LTRAEASLPR NLLFKHAPNS KEVIGVTSKE YIPKGTRFGP LVGESYTTET 120
VPKNANRKYF WRIYCNGEFH HFVDGFNEEK SNWMRYVNPA HSQQEQNLAA CQNGMNIYFY 180
TVKPIPANQE LLVWYCPEFA ERLHYPPSGD LMMLKLKQSL MEAKQNATET DSIQEKSSGK 240
KEHSVSEILK GTRRDPVRPQ SSPTKSLQDS PKKPSLEQPF FPRVVYPVRP HINEEYLKAN 300
TVYGLDRPSY VTHSPVQSSA TPSPSARSSP EHSLQSSSPH SSPGLTLSPP TPSSQEHKEG 360
FPFPNGLYSR GGLGHYPGYT PPSHLGPAFL HSYSSVSPHY SRYLLPHYPV GCNSITSLNG 420
LGAGPVGSLF PRMYPLYSNL LSGGSLSQHM LSQSPLPSML PSEGGRRLLF PSEPHRDLLI 480
PAPNSAFSAT GLASSLKDKP SSPSNGSPTA GTAASSSEHG MPTKPTSAML ASSRSEEEAI 540
NLTKIKRNIT GYKTLPYPLK KQNGKIKYEC NVCSKTFGQL SNLKVHLRVH SGERPFKCQT 600
CNKGFTQLAH LQKHYLVHTG EKPHECQVCH KRFSSTSNLK THLRLHSGEK PYQCKLCPAK 660
FTQFVHLKLH KRLHTRDRPH KCLHCHHSYI HLCSLKVHLK GNCLASPNPR GRSPEELNHI 720
NEEIEKFDIS DNADRLEEMD NVDVESAVEK QILNMLWREM DLKASYHKSM GNGLRSTGYG 780
LYEPNNETSV IKLPHSSPLP LLSIKVKQES LEPIDP 816
Nucleotide Sequence
(Fasta)		ATGTGTGGCT CCACTCAGAG TTTTCCAGCT GCCACACAGC ATAGTTCGGA TATTTTAACT 60
GCAGAGGAAT CGCAAGAGAC TGGAGAGTTC ACCATGAAAA TGGATGTGGA AGATGCTGAT 120
ATGACAAAGT GGACAGAGTT AGAATTTGAA GAGAAGTGTA CGTACATTGT AAAGGACCAT 180
CCCTGGGAAT CCAGCACTGA CAGTGGAAGC TTGACCCGAG CTGAAGCCTC ACTACCAAGA 240
AACTTGCTTT TCAAACATGC ACCTAACTCC AAAGAGGTGA TTGGTGTTAC AAGCAAGGAA 300
TACATACCAA AAGGAACGCG CTTTGGGCCC CTTGTAGGCG AATCATACAC AACTGAGACT 360
GTTCCCAAGA ATGCAAACAG AAAGTACTTT TGGAGGATCT ATTGCAATGG AGAGTTTCAT 420
CACTTTGTGG ATGGTTTCAA TGAGGAAAAG AGCAACTGGA TGCGTTATGT GAACCCAGCA 480
CACTCTCAGC AGGAGCAGAA CCTGGCTGCC TGCCAAAATG GAATGAACAT TTACTTCTAC 540
ACCGTCAAAC CTATTCCAGC CAACCAGGAG CTGCTGGTGT GGTACTGCCC AGAGTTTGCT 600
GAACGTCTGC ATTACCCGCC CTCTGGGGAC CTTATGATGC TGAAGCTCAA ACAGAGCCTT 660
ATGGAAGCAA AGCAAAATGC AACAGAGACT GACAGTATCC AGGAGAAAAG CTCAGGGAAG 720
AAAGAACACA GTGTTTCAGA GATCCTGAAG GGAACAAGAA GAGACCCCGT GCGACCACAG 780
TCAAGTCCCA CAAAGTCCTT GCAGGATTCA CCCAAGAAAC CCAGCTTGGA GCAGCCTTTC 840
TTCCCCCGAG TGGTCTACCC CGTTCGCCCA CACATCAATG AAGAATACTT GAAAGCCAAT 900
ACTGTGTATG GTTTAGACCG TCCAAGTTAT GTCACCCACT CCCCTGTTCA GTCTTCTGCC 960
ACTCCCAGCC CTTCAGCCCG CAGCAGCCCA GAGCACAGCC TACAAAGCAG CAGCCCACAC 1020
AGCAGCCCAG GCCTCACCCT CTCTCCTCCA ACCCCCTCCT CTCAGGAACA CAAAGAGGGC 1080
TTTCCATTCC CCAATGGACT TTACAGCCGG GGTGGTTTGG GTCATTACCC AGGTTATACC 1140
CCACCTAGCC ACCTTGGCCC TGCCTTCTTA CATTCATATA GCTCAGTGAG TCCTCACTAT 1200
TCCAGGTACC TGTTACCCCA CTATCCAGTT GGTTGCAACA GCATAACCAG CCTGAATGGG 1260
TTGGGTGCTG GGCCAGTGGG AAGTCTCTTT CCACGTATGT ACCCTCTCTA CAGCAATCTG 1320
CTGTCAGGGG GCAGCCTGTC CCAGCACATG CTAAGCCAGT CCCCTCTTCC CAGCATGCTG 1380
CCTTCAGAAG GGGGGCGACG GCTCCTGTTC CCCTCTGAGC CTCACAGGGA TTTGCTTATT 1440
CCGGCGCCGA ACAGTGCCTT TTCTGCCACT GGCCTGGCCT CCTCCCTCAA GGATAAGCCA 1500
TCCAGCCCCA GCAATGGGTC TCCCACTGCT GGAACAGCTG CCTCCTCCTC AGAGCATGGC 1560
ATGCCTACAA AACCTACCTC AGCCATGCTT GCCAGCAGCA GGAGTGAAGA AGAAGCCATA 1620
AACCTGACCA AGATAAAGCG CAACATTACC GGCTACAAGA CTCTGCCTTA TCCCTTGAAG 1680
AAGCAGAATG GAAAGATCAA ATATGAGTGC AATGTCTGCA GCAAAACCTT TGGGCAGCTG 1740
TCAAACCTAA AGGTGCACCT TCGAGTCCAC AGTGGGGAGA GACCCTTTAA ATGTCAAACC 1800
TGCAATAAAG GATTTACACA GCTAGCACAC TTACAGAAGC ACTATCTGGT CCACACAGGG 1860
GAGAAGCCTC ATGAATGTCA GGTTTGCCAC AAACGCTTCA GCAGCACCAG CAACTTAAAG 1920
ACCCACTTGC GGCTGCACTC TGGAGAGAAA CCATACCAGT GCAAGCTGTG CCCAGCGAAG 1980
TTTACACAAT TTGTCCACCT GAAACTACAC AAGCGACTGC ACACCCGTGA CCGGCCACAC 2040
AAGTGCCTGC ACTGTCACCA TAGCTACATT CACCTGTGCA GCCTCAAGGT CCACTTGAAG 2100
GGTAACTGCC TGGCTTCCCC AAACCCTAGA GGCCGCTCCC CCGAGGAGCT CAATCATATC 2160
AATGAAGAGA TCGAAAAGTT CGACATCAGT GACAATGCCG ACCGCTTGGA AGAGATGGAT 2220
AACGTGGATG TGGAGAGTGC TGTGGAAAAG CAGATCCTTA ACATGCTGTG GAGGGAGATG 2280
GACCTCAAGG CTTCATACCA CAAGAGCATG GGCAATGGGC TGCGATCCAC AGGCTATGGC 2340
TTGTACGAAC CCAACAATGA GACCTCCGTC ATCAAGTTGC CTCACAGTAG CCCACTACCT 2400
CTTTTATCTA TAAAGGTTAA ACAGGAATCT CTAGAACCCA TAGACCCTTG AAACTGACTG 2460
CCTATCTTAC TAAAAATATT AAAGATATTT ATGACTCTCT TGAGAGCCAG GGTGCCTGTA 2520
GCAATTCAAT GTACGCAGTC AACGTCATTG TTACATAGCA AACTTGGCTT CCTCTGTCAG 2580
GGGACCTCAA TTCTCAGGGC TTAAAGAGGC ATTGATATGG ACTATTTATA GTCATTTTTT 2640
CCACTTATGT TAAAGACAAT CATTAATAGA TGATTTTGTT TTGTTGTTGC TCAATTATAT 2700
ATCTTCCTTA ATTTATTAAT ATTTTTCATT GTTAAAAGCA ATAATTGGAA ATAATGTTTA 2760
CAATGACTGG GTGATTCATT GTAATTGAAT ATGTTATTTT TTTGTTGCCA TTCTTTATAG 2820
ATGTATACTT TCTGCACATC CCTTTGTCAC ACTAGGAAGT AATTTTCTTA AGAAAGAGAA 2880
ATGCACGGTA GTGACAATGA GAACAGTATT CAGGGTTTTA CAAAACGGAA GAAAAAAAGA 2940
AAGGATTTTT GCTTTGCCAA AGGTGGACAT TTGAAATGAT GAACCATGGG GATCATTTGT 3000
GTAAAAATGT GGTGTAGTGT TTTGTTTTAC TTCCTTTTTC CTTGTGAGAC TTTCCTCTTC 3060
CTCAGTATTT GTATTTGTAT AGAGTTGTGG TTAATTTAAT TGAAAACAAA AGGGCATTTT 3120
TGTATATTTT CAACAACAGT TACCTCAATT TGTGTGTCCA GTGATGATGG GGAGGAGCTG 3180
TAATATTTAT CGCTTTGCTA CTTGAAGAGT TAAACCAAAT GTACAAAAGC CCAGCTTTCA 3240
GTTTGGCCCA AAGAATAGGA GAAATCCTTT TAGATGTAGC ATGTCAGCTG CAAAACTGGG 3300
AATGTTATTT ATAAAGAGAA TTAAAGCAGT CAACACCAAA ATGAGATATT TGAACTTGGG 3360
TTTTCTGATA TGAGGCTAGT TACCAAAGTT CAGTTTCTTT CATATACCAA AAAAGAGAAA 3420
ATACTGCTTA TGTAAATAAT AGTTAAGTTA CTTGGCCAGC ATCTGTAATA TAGCTTTTTC 3480
AGTGTTTAAA ACTCCCCATT GCTCACATTT ATAGCACAGA CCAAAGCATC ACTACTCTGT 3540
CTCTGGACAC ACTACTTCCT TATTGTTCAC TCTTTTGATA GAATTTCACA CATTCTTTTC 3600
GGCAATAGCT TAAAGATCAA GCTTTACGAT TGTCACCCTG CTGACTGCAT TATTCACAAC 3660
AGCGCCACTG AATGTAGCCA CACAGCAGTT GAAAGCTTTT CTTGATCTAT GACCAAAGTT 3720
TCTTCAGCTT CTGCTTCAAT CAATAGAGGA AAAACTGTTT TGTATGTTTA CAAACTGGTT 3780
TACATTGTTA TTTATGTGCA ACTTGTCAAA ATTGTAAATT ATGATATAAA TGTTCATTGT 3840
TCTATCAGCA TTTTGGTGTT TTTACTCTGA TCCACTGATG CATAGTGTGT AGGAAAACAA 3900
AACCTTTTTA GAAGGCGGTT ATTTTTACAG ATCTGCTTCT GAGAGAAAAT TAAGAATGTC 3960
TTTCTACTTG TAGTTGCATT TTTTTTTAAT TGTTGAATAC ATCACTCCTT TTTTCTCAGT 4020
CACTACTCTA TAATATCCAT CCATCTTCTA ACTGCTTCAT CCAACTTAGG GTCAAGGGAC 4080
AGCCGGAGCC TATCCCAGCA AGCAAATCAT AACCTGGCAA AATTCATTAC AGGGCACACA 4140
CACCAAAAGT CAATTAATCT ACCATTGTGT CTTTTGATTG TGGAAGGAAA CTCGTGCACC 4200
TGGAACAAAT CACATGAACA TTGGGTGAAC ATATAAACTC TACACAGATA GCGCTCCAGG 4260
TCTGGAATTA AACCCAGAGC CCCAGTGCAG TGAGGTAGAA ATGCTGTGGA CTGCCTTATT 4320
TGCTATAAAC TACAGTATAT ACACTACTGT AAGCCAAAAT GTTTCTTCTT TCTGCTTTTC 4380
AGGTTGGATT CAACCATTAT TTGTTACTTT ATTACACACC TGAAGAAGGG TCCACGGCTG 4440
AAACATTGTG TTCTCTTTTT TTTTTTCAGC ATGAAATAAA CCTTTTACTT GTTCCTTTGC 4500
A 4502
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 71 0.0 969
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 70 0.0 967
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 70 0.0 965
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 71 0.0 964
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 70 0.0 962
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 70 0.0 961
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 67 0.0 924
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 68 0.0 909
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 66 0.0 908
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 65 0.0 902
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 66 0.0 895
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 66 0.0 895
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 66 0.0 894
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 66 0.0 894
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 66 0.0 892
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 66 0.0 892
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 66 0.0 890
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 66 0.0 890
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 66 0.0 890
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 65 0.0 889
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 65 0.0 888
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 67 0.0 887
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 67 0.0 885
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 67 0.0 885
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 64 0.0 885
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 66 0.0 884
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 65 0.0 884
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 68 0.0 882
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 64 0.0 882
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 65 0.0 881
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 66 0.0 881
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 67 0.0 880
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 66 0.0 872
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 67 0.0 869
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 61 0.0 862
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 66 0.0 862
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 65 0.0 857
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 65 0.0 857
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 63 0.0 857
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 64 0.0 845
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 63 0.0 837
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 65 0.0 832
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 63 0.0 822
WERAM-Orn-0077 ENSONIP00000008446.1 Oreochromis niloticus 54 0.0 772
WERAM-Xim-0163 ENSXMAP00000013381.1 Xiphophorus maculatus 53 0.0 757
WERAM-Pof-0225 ENSPFOP00000018402.1 Poecilia formosa 52 0.0 749
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 55 0.0 702
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 54 0.0 679
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 52 3e-180 629
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 68 2e-137 487
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 71 3e-131 466
WERAM-Tar-0004 ENSTRUP00000000947.1 Takifugu rubripes 57 3e-123 440
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 66 2e-104 378
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 62 3e-98 357
WERAM-Gaa-0096 ENSGACP00000012338.1 Gasterosteus aculeatus 61 1e-89 328
WERAM-Ten-0146 ENSTNIP00000015268.1 Tetraodon nigroviridis 69 4e-87 320
WERAM-Lac-0194 ENSLACP00000022113.1 Latimeria chalumnae 80 2e-86 317
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 64 8e-76 282
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 61 2e-53 208
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 40 2e-27 122
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 32 3e-22 105
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 36 4e-21 101
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 39 2e-20 99.0
Created Date 25-Jun-2016