WERAM Information

Tag Content
WERAM ID WERAM-Leo-0124
Ensembl Protein ID ENSLOCP00000015205.1
Gene Name smndc1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLOCG00000012355.1 ENSLOCT00000015234.1 ENSLOCP00000015205.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 7.50e-12 45.5 73 127
Organism Lepisosteus oculatus
Domain Profile
  Me_Reader Tudor
             Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekgnrlre 60 
                           ++vG+ ++a ws+dG+ Y+++i    ++++ ++ + +i++ ++++ +++ L + + + e
  ENSLOCP00000015205.1  73 WEVGDSCMAVWSEDGQLYEAEI----EEIDEENGTAAITFLGYGNAEVVPLQNLKAVEE 127
                           99********************....***************************999987 PP
Protein Sequence
(Fasta)		MSDDLVKQLA SYKAQLQQVE AALSTDAENE DLLKLQKDLQ EVIELTKDLL SSQPSVAPTS 60
SDSSAAVPIS HSWEVGDSCM AVWSEDGQLY EAEIEEIDEE NGTAAITFLG YGNAEVVPLQ 120
NLKAVEEGKK SEEDGGKSKS RKEQIAQQRE YKKKKALKKA QRMKELEQER EDQKTKWQQF 180
NNKAYSKNKK GQVKRSIFAS PESVNGKVGV GTCGIADKPM TQYQDTSKYN VRHLMPQ 237
Nucleotide Sequence
(Fasta)		TTTAAACTGG TGTAAATTTA GAAAAGATTC CCAAGGAGGT CCCCCAGCCA AATAACGTAG 60
CAGAATCGGT CCGTAAAGTA ATTTTAGGAT AGAAAGATTG TTTGCTCCAG GCCCATGTTT 120
GATCGTTTTA TTGCAACATG ACCTGCGATA CGACAGCGAC CTGGAAACAG CGTCGACAGG 180
GTTAAGCAGC TCTACTAACG GTCTCGCGAG ACTTTCGGCT TTAGGTGATG AGATTACGTA 240
GGTACCTTTC CGGTAGTGAG GCGATCTGTG TTGGAAACGA AATTCTGAAA CAGTCTTTTG 300
CACGATTTCT CTTAGAATTA TACTTCTTCG GTAATTCAAG ATGTCAGACG ACCTGGTGAA 360
ACAGTTGGCC AGCTACAAAG CTCAGCTTCA GCAAGTGGAA GCAGCTTTAT CAACAGATGC 420
AGAAAATGAA GACCTGCTTA AATTACAGAA AGATTTACAG GAAGTAATAG AGTTGACCAA 480
AGACCTCCTG TCAAGCCAGC CCTCTGTGGC CCCCACCAGT TCAGACAGCT CAGCTGCAGT 540
CCCCATCAGC CACTCCTGGG AGGTGGGGGA CAGCTGCATG GCTGTGTGGA GTGAGGATGG 600
ACAGTTGTAC GAAGCGGAGA TCGAGGAGAT AGATGAGGAG AACGGCACGG CTGCCATTAC 660
GTTCTTGGGA TATGGCAATG CAGAAGTCGT GCCCCTGCAG AATCTGAAGG CTGTGGAGGA 720
AGGAAAGAAG TCGGAGGAGG ATGGGGGCAA ATCCAAATCC AGGAAGGAGC AAATTGCCCA 780
GCAGAGGGAG TACAAGAAGA AGAAGGCACT GAAGAAAGCT CAGAGAATGA AGGAACTGGA 840
ACAGGAACGA GAAGACCAAA AAACAAAGTG GCAGCAATTT AATAACAAAG CCTATTCGAA 900
GAACAAGAAA GGCCAGGTGA AGAGGAGTAT ATTTGCATCA CCGGAGAGTG TTAATGGAAA 960
AGTTGGTGTT GGAACATGTG GAATAGCTGA TAAACCAATG ACTCAGTACC AAGACACATC 1020
CAAATATAAT GTGAGGCATC TCATGCCACA GTAA 1055
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ora-0017 ENSOANP00000002552.2 Ornithorhynchus anatinus 84 1e-94 342
WERAM-Lac-0064 ENSLACP00000008810.1 Latimeria chalumnae 82 2e-94 342
WERAM-Soa-0056 ENSSARP00000005482.1 Sorex araneus 83 7e-94 340
WERAM-Gaa-0098 ENSGACP00000012540.1 Gasterosteus aculeatus 82 1e-93 339
WERAM-Ocp-0134 ENSOPRP00000014013.1 Ochotona princeps 83 1e-93 339
WERAM-Tub-0111 ENSTBEP00000012421.1 Tupaia belangeri 83 2e-93 338
WERAM-Orn-0003 ENSONIP00000000550.1 Oreochromis niloticus 81 2e-93 338
WERAM-Orc-0076 ENSOCUP00000007040.2 Oryctolagus cuniculus 83 4e-93 338
WERAM-Hos-0101 ENSP00000358605.1 Homo sapiens 83 5e-93 337
WERAM-Mod-0084 ENSMODP00000013212.2 Monodelphis domestica 83 6e-93 337
WERAM-Sus-0214 ENSSSCP00000026180.1 Sus scrofa 83 6e-93 337
WERAM-Poa-0026 ENSPPYP00000003078.1 Pongo abelii 83 7e-93 337
WERAM-Paa-0147 ENSPANP00000020975.1 Papio anubis 83 7e-93 337
WERAM-Pat-0022 ENSPTRP00000005182.3 Pan troglodytes 83 7e-93 337
WERAM-Nol-0168 ENSNLEP00000018780.1 Nomascus leucogenys 83 7e-93 337
WERAM-Mup-0020 ENSMPUP00000002068.1 Mustela putorius furo 83 7e-93 337
WERAM-Mam-0060 ENSMMUP00000010218.1 Macaca mulatta 83 7e-93 337
WERAM-Gog-0116 ENSGGOP00000009828.2 Gorilla gorilla 83 7e-93 337
WERAM-Chs-0056 ENSCSAP00000001485.1 Chlorocebus sabaeus 83 7e-93 337
WERAM-Caj-0197 ENSCJAP00000034639.1 Callithrix jacchus 83 7e-93 337
WERAM-Aim-0064 ENSAMEP00000005552.1 Ailuropoda melanoleuca 83 7e-93 337
WERAM-Ict-0061 ENSSTOP00000005452.2 Ictidomys tridecemlineatus 83 8e-93 337
WERAM-Loa-0129 ENSLAFP00000012022.2 Loxodonta africana 82 1e-92 335
WERAM-Ova-0100 ENSOARP00000010198.1 Ovis aries 82 2e-92 335
WERAM-Otg-0012 ENSOGAP00000000511.2 Otolemur garnettii 82 2e-92 335
WERAM-Bot-0005 ENSBTAP00000000722.2 Bos taurus 82 2e-92 335
WERAM-Ran-0098 ENSRNOP00000020539.5 Rattus norvegicus 83 2e-92 335
WERAM-Myl-0175 ENSMLUP00000014580.1 Myotis lucifugus 82 2e-92 335
WERAM-Dan-0107 ENSDNOP00000012705.2 Dasypus novemcinctus 83 3e-92 335
WERAM-Dar-0116 ENSDARP00000038215.5 Danio rerio 81 7e-92 333
WERAM-Mum-0066 ENSMUSP00000025997.5 Mus musculus 83 8e-92 333
WERAM-Xim-0155 ENSXMAP00000012780.1 Xiphophorus maculatus 82 9e-92 333
WERAM-Caf-0119 ENSCAFP00000015780.3 Canis familiaris 83 9e-92 333
WERAM-Fec-0182 ENSFCAP00000025256.1 Felis catus 82 1e-91 333
WERAM-Asm-0216 ENSAMXP00000020915.1 Astyanax mexicanus 79 3e-91 332
WERAM-Tar-0084 ENSTRUP00000016366.1 Takifugu rubripes 79 3e-91 331
WERAM-Gam-0182 ENSGMOP00000017798.1 Gadus morhua 81 1e-90 329
WERAM-Pof-0213 ENSPFOP00000017186.1 Poecilia formosa 81 2e-90 329
WERAM-Orla-0056 ENSORLP00000007459.1 Oryzias latipes 79 9e-90 327
WERAM-Gaga-0089 ENSGALP00000013929.4 Gallus gallus 83 2e-89 325
WERAM-Tag-0132 ENSTGUP00000010931.1 Taeniopygia guttata 83 2e-89 325
WERAM-Fia-0037 ENSFALP00000002401.1 Ficedula albicollis 83 2e-89 325
WERAM-Pes-0113 ENSPSIP00000013643.1 Pelodiscus sinensis 84 2e-89 325
WERAM-Anc-0058 ENSACAP00000005857.1 Anolis carolinensis 83 1e-88 323
WERAM-Cap-0079 ENSCPOP00000005709.2 Cavia porcellus 77 3e-88 321
WERAM-Ten-0164 ENSTNIP00000016321.1 Tetraodon nigroviridis 77 4e-88 321
WERAM-Dio-0058 ENSDORP00000005294.1 Dipodomys ordii 73 1e-74 276
WERAM-Sah-0170 ENSSHAP00000017892.1 Sarcophilus harrisii 83 2e-73 272
WERAM-Vip-0036 ENSVPAP00000003145.1 Vicugna pacos 82 2e-73 272
WERAM-Pem-0076 ENSPMAP00000008472.1 Petromyzon marinus 63 4e-72 268
WERAM-Meg-0112 ENSMGAP00000011207.2 Meleagris gallopavo 84 9e-71 263
WERAM-Anp-0034 ENSAPLP00000003829.1 Anas platyrhynchos 83 5e-70 261
WERAM-Ere-0065 ENSEEUP00000005400.1 Erinaceus europaeus 68 3e-66 248
WERAM-Chh-0026 ENSCHOP00000002599.1 Choloepus hoffmanni 79 1e-64 243
WERAM-Prc-0158 ENSPCAP00000015111.1 Procavia capensis 79 3e-63 238
WERAM-Tut-0090 ENSTTRP00000007470.1 Tursiops truncatus 68 1e-60 229
WERAM-Tas-0066 ENSTSYP00000006045.1 Tarsius syrichta 68 1e-60 229
WERAM-Mae-0094 ENSMEUP00000009229.1 Macropus eugenii 59 6e-42 167
WERAM-Xet-0102 ENSXETP00000033649.2 Xenopus tropicalis 71 3e-38 155
WERAM-Ect-0134 ENSETEP00000015345.1 Echinops telfairi 49 1e-34 143
WERAM-Drm-0076 FBpp0289146 Drosophila melanogaster 40 5e-29 125
WERAM-Lab-0003 EDR15018 Laccaria bicolor 34 1e-15 80.5
WERAM-Mel-0026 EGG10984 Melampsora laricipopulina 32 2e-13 73.2
WERAM-Pot-0055 POPTR_0004s23810.1 Populus trichocarpa 30 3e-13 72.4
WERAM-Zem-0007 GRMZM2G005737_P01 Zea mays 27 6e-13 71.6
WERAM-Prp-0076 EMJ24376 Prunus persica 27 3e-12 68.9
WERAM-Sob-0098 Sb07g001010.1 Sorghum bicolor 26 4e-12 68.9
WERAM-Orr-0090 ORUFI08G00760.1 Oryza rufipogon 27 5e-12 68.6
WERAM-Orni-0085 ONIVA08G00730.1 Oryza nivara 27 5e-12 68.6
WERAM-Ori-0093 BGIOSGA027775-PA Oryza indica 27 5e-12 68.6
WERAM-Orgl-0084 OGLUM08G00790.1 Oryza glumaepatula 27 5e-12 68.6
WERAM-Org-0087 ORGLA08G0001000.1 Oryza glaberrima 27 5e-12 68.6
WERAM-Orb-0087 OBART08G00720.1 Oryza barthii 27 5e-12 68.6
WERAM-Viv-0076 VIT_12s0035g01830.t01 Vitis vinifera 27 7e-12 68.2
WERAM-Glm-0215 GLYMA17G00560.1 Glycine max 26 2e-11 67.0
WERAM-Orbr-0094 OB08G10830.1 Oryza brachyantha 26 3e-11 65.9
WERAM-Sei-0072 Si017933m Setaria italica 27 4e-11 65.5
WERAM-Arl-0131 scaffold_500192.1 Arabidopsis lyrata 29 5e-11 65.1
WERAM-Met-0118 KEH32747 Medicago truncatula 26 8e-11 64.7
WERAM-Art-0036 AT2G02570.1 Arabidopsis thaliana 29 2e-10 63.2
WERAM-Sol-0019 Solyc01g103020.2.1 Solanum lycopersicum 25 3e-10 62.8
WERAM-Tru-0060 TRIUR3_24898-P1 Triticum urartu 27 4e-10 62.4
WERAM-Tra-0292 Traes_7AL_F507A9C43.1 Triticum aestivum 27 4e-10 62.4
WERAM-Lep-0085 LPERR08G00910.1 Leersia perrieri 27 4e-10 62.4
WERAM-Sot-0061 PGSC0003DMT400053385 Solanum tuberosum 25 8e-10 61.2
WERAM-Put-0003 PTTG_02468P0 Puccinia triticina 31 2e-09 60.1
WERAM-Orl-0027 KN538777.1_FGP011 Oryza longistaminata 28 5e-09 58.5
WERAM-Mua-0136 GSMUA_Achr8P34180_001 Musa acuminata 27 1e-08 57.4
WERAM-Spr-0036 CBQ69725 Sporisorium reilianum 34 1e-08 57.4
WERAM-Brr-0132 Bra026585.1-P Brassica rapa 33 2e-08 56.6
WERAM-Brd-0073 BRADI3G13410.3 Brachypodium distachyon 28 3e-08 56.2
WERAM-Tum-0016 CAZ83345 Tuber melanosporum 34 3e-08 56.2
WERAM-Bro-0128 Bo7g080510.1 Brassica oleracea 32 1e-07 53.9
WERAM-Hov-0008 MLOC_11731.5 Hordeum vulgare 28 3e-07 52.8
WERAM-Chr-0026 EDP07443 Chlamydomonas reinhardtii 33 3e-07 52.8
WERAM-Aet-0098 EMT15367 Aegilops tauschii 33 1e-06 50.4
WERAM-Scp-0041 SPCC1281.02c.1:pep Schizosaccharomyces pombe 29 2e-06 50.1
WERAM-Crn-0013 AAW42334 Cryptococcus neoformans 26 2e-06 49.7
WERAM-Amt-0087 ERM99754 Amborella trichopoda 29 2e-06 49.7
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 33 4e-06 48.9
Created Date 25-Jun-2016