WERAM Information

Tag Content
WERAM ID WERAM-Gaga-0089
Ensembl Protein ID ENSGALP00000013929.4
Gene Name SMNDC1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGALG00000008561.4 ENSGALT00000013945.4 ENSGALP00000013929.4
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 7.80e-13 48.2 79 135
Organism Gallus gallus
Domain Profile
  Me_Reader Tudor
             Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekgnrlreqy 62 
                           +kvG+r++a ws+dG++Y+++i    ++++ ++ + ++++ ++++ +++ L + +++ e +
  ENSGALP00000013929.4  79 WKVGDRCMAIWSEDGQCYEAEI----EEIDEENGTAAVTFAGYGNAEVTPLFNLKPVEEGR 135
                           9*********************....*****************************999876 PP
Protein Sequence
(Fasta)		PTAPAEMSED LAKQLASYKA QLQQVEAALS GNADNEDLLK LKKDLQEVIE LTKDLLSTQP 60
SETLASSDSS ASALPSHSWK VGDRCMAIWS EDGQCYEAEI EEIDEENGTA AVTFAGYGNA 120
EVTPLFNLKP VEEGRKAKED SGNKPMSKKE MIAQQREYKK KKALKKAQRI KELEQEREDQ 180
KVKWQQFNNR AYSKNKKGQV KRSIFASPES VTGKVGVGTC GIADKPMTQY QDTSKYNVRH 240
LMPQ 244
Nucleotide Sequence
(Fasta)		GGCCCTCGGC TCCTCCCACT TCCCGTCTCT CCCCGTAGTA CGGCCCGCGG CTCCGGCGAT 60
CGGGCGGCAG CGGTCTGACG GCTCCCAGCG CGGCGCCCCC GGCCCGGCCC TCGGGCCCCA 120
CAGCGCCCGC CGAGATGTCG GAAGACCTGG CCAAGCAGTT AGCCAGCTAC AAGGCCCAGC 180
TCCAGCAGGT CGAGGCGGCC TTGTCTGGGA ACGCTGACAA TGAGGACTTG TTAAAGCTAA 240
AGAAGGACTT ACAGGAAGTG ATAGAACTGA CCAAAGATCT CCTTTCTACG CAACCTTCAG 300
AAACTCTTGC AAGTTCTGAC AGTTCTGCTT CTGCTCTTCC CAGCCACTCC TGGAAGGTTG 360
GGGATAGGTG TATGGCAATA TGGAGTGAAG ATGGACAGTG TTATGAAGCT GAGATTGAAG 420
AAATAGATGA GGAGAATGGA ACAGCTGCAG TCACTTTTGC TGGATATGGG AATGCTGAAG 480
TTACACCGCT GTTCAACCTC AAGCCTGTGG AAGAGGGAAG AAAAGCAAAA GAGGACAGTG 540
GCAACAAACC CATGTCCAAA AAAGAGATGA TAGCTCAGCA ACGGGAGTAT AAAAAGAAAA 600
AAGCTTTGAA AAAAGCTCAG AGAATTAAAG AACTTGAACA GGAACGAGAG GACCAGAAAG 660
TCAAATGGCA ACAGTTCAAC AACAGAGCAT ATTCTAAAAA CAAAAAAGGC CAGGTAAAGC 720
GGAGTATTTT TGCTTCCCCA GAGAGTGTAA CTGGCAAAGT TGGAGTTGGA ACATGTGGAA 780
TTGCAGACAA ACCTATGACA CAGTATCAAG ATACCTCTAA ATATAACGTC AGGCATTTGA 840
TGCCTCAGTA GCAGGGGAAA AAGGTCGAAC TTCATCTCTG CAGGGCTTTT CACTTATCTT 900
TTTATCATTA TATTTTTCTA AAAGTAAATT ATTTGTTGGC ACATAGCAAG TAGTCCATTT 960
TGTCACCATC ACTTTGGCTT CAGCTGATAT GAGCCTTAAA TTTCCAACTA TTGATTTGAC 1020
TCCCCTCTTT TTTTTTTTTT TTGGTAGTTG CATTAAAATA TGTTCTGCGG GTAAATGCTT 1080
TCATAAACTG CTGCTACCTT TTATGCTAAA AGCAGTAGTT ACCTGGAAGT TTGATCTCCA 1140
GAATCTTCCA TTTGGATATA TGTACTCTTC CATTAGTATG GATACTAATG TTTGGGTTTT 1200
TTTTCCTTAA GAAAAGTGGT GGTATAAAAA TGGCACCTAT AAAGCCTCCC TCATTTCTGT 1260
AGTCACAGTG CTGTCTGCTG GCCTCAATGA CAAGCTTAGT GTTACAGAGC TGCTGCAGCA 1320
CTGGGAGAAA GATTCCATCA TAGCATGCAA GTCATGTGGA ATTACAAGGG AGGTTCTAAA 1380
TTACTCCCTT ACAAATCCAC TGCAGATAGA TTTGTACAGC TGTGAAGGAG GGCAGAACAG 1440
GGCTGTTGTG ATTTTTCTTA CTAAGTATGA TTCATGTGCT AGAAACAATA AATCTGGACT 1500
TCAATTCCAG TCCAAAAAGT TAAGTAGATT TTTTTTTCCT CTAACAGTCA TCAGATTTTA 1560
ACAGGAAGTT ATTGAAACGT AACCAGAACA ACTTAGGAAG AGACTTCAGT TTCAAAGACC 1620
AGAACTGTAC TTAAAGCAAT GCCCCCTTGC CCCAGGGATT AGAAGTGGGA GAACTCTAGA 1680
CGGTTATGCT TTGGAAATGT CATCACCTCC CCTCTCGCAG TTTTCAAACT TAGGAGTTTT 1740
GATGGTATGG TCACAGACCT TGAGCAGACA GTAACATCGT GCGTCTGGGC TGCCTCCATC 1800
TTGTAAAGTA GTACTGAAGC ATAGCAGGTA TGAATGCCTA GATCCCACTT AGTTGTGAGT 1860
GAGTGAAGGT TAGTCTCAAG TTTCTGTCCG TAAATAACTG ACTGGCCCTA GTGTTCATTG 1920
TAACTTCAGC TGTATTACAG TGCTGCTGAG CCCCCTTCAG TTTTATTCAG GAAGCCACGT 1980
GTAAAAGCTC TTGCTTTTTT GTATTTCATG TGATTTGCCT TTCTTCTGTT ATTTGTCTCC 2040
CACTTACGGT AGTGGTGCCA TCTCTGAATC CGTAATGTGT TCAAAGATCT TAATGGGTAG 2100
CCCTGTATAC AATGTAGATA TTATTTTTGT AAAATCTAGG GCTGAGTTAA TGGACAAGAG 2160
TACATCAGCT GTTCCCCCAT TAAATGATTC AAGGGTGCAT CTTGTTCATT AACCCTGACC 2220
GTTATTTCCC TGTATATTAT GTTAATGTAG CTCATTTTGT AATTTGTTAC CTAGATCAGG 2280
TCACGTCAGC AATTGTTGAT GCACTGATTG GTGGAGATGT CCATCAGTTA CCTGAGTCAC 2340
AACTCAAGCT AAACTCTACA ACTGGTAGTT TAGAATCCAT GCATAGAAAG AAGTTTTCCC 2400
TATAATGGGA GAAGGTGATT TTTATGAATA CAAAGTGTGT TAATTTCAGT TTTGTATGTT 2460
TAACTTTTAT TAAATAAAGT GTTTAAAATC TGCTGGA 2498
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Tag-0132 ENSTGUP00000010931.1 Taeniopygia guttata 100 9e-110 393
WERAM-Fia-0037 ENSFALP00000002401.1 Ficedula albicollis 100 9e-110 393
WERAM-Ora-0017 ENSOANP00000002552.2 Ornithorhynchus anatinus 97 4e-108 387
WERAM-Tub-0111 ENSTBEP00000012421.1 Tupaia belangeri 96 4e-108 387
WERAM-Poa-0026 ENSPPYP00000003078.1 Pongo abelii 96 4e-108 387
WERAM-Paa-0147 ENSPANP00000020975.1 Papio anubis 96 4e-108 387
WERAM-Pat-0022 ENSPTRP00000005182.3 Pan troglodytes 96 4e-108 387
WERAM-Nol-0168 ENSNLEP00000018780.1 Nomascus leucogenys 96 4e-108 387
WERAM-Mup-0020 ENSMPUP00000002068.1 Mustela putorius furo 96 4e-108 387
WERAM-Mam-0060 ENSMMUP00000010218.1 Macaca mulatta 96 4e-108 387
WERAM-Gog-0116 ENSGGOP00000009828.2 Gorilla gorilla 96 4e-108 387
WERAM-Chs-0056 ENSCSAP00000001485.1 Chlorocebus sabaeus 96 4e-108 387
WERAM-Caj-0197 ENSCJAP00000034639.1 Callithrix jacchus 96 4e-108 387
WERAM-Aim-0064 ENSAMEP00000005552.1 Ailuropoda melanoleuca 96 4e-108 387
WERAM-Ict-0061 ENSSTOP00000005452.2 Ictidomys tridecemlineatus 97 5e-108 387
WERAM-Orc-0076 ENSOCUP00000007040.2 Oryctolagus cuniculus 95 5e-108 387
WERAM-Ova-0100 ENSOARP00000010198.1 Ovis aries 96 6e-108 387
WERAM-Otg-0012 ENSOGAP00000000511.2 Otolemur garnettii 96 6e-108 387
WERAM-Bot-0005 ENSBTAP00000000722.2 Bos taurus 96 6e-108 387
WERAM-Hos-0101 ENSP00000358605.1 Homo sapiens 96 8e-108 387
WERAM-Dan-0107 ENSDNOP00000012705.2 Dasypus novemcinctus 95 8e-108 386
WERAM-Mod-0084 ENSMODP00000013212.2 Monodelphis domestica 96 8e-108 386
WERAM-Loa-0129 ENSLAFP00000012022.2 Loxodonta africana 96 1e-107 386
WERAM-Sus-0214 ENSSSCP00000026180.1 Sus scrofa 96 2e-107 385
WERAM-Ocp-0134 ENSOPRP00000014013.1 Ochotona princeps 95 2e-107 385
WERAM-Soa-0056 ENSSARP00000005482.1 Sorex araneus 95 2e-107 385
WERAM-Myl-0175 ENSMLUP00000014580.1 Myotis lucifugus 96 4e-107 384
WERAM-Fec-0182 ENSFCAP00000025256.1 Felis catus 95 5e-107 384
WERAM-Ran-0098 ENSRNOP00000020539.5 Rattus norvegicus 95 8e-107 383
WERAM-Mum-0066 ENSMUSP00000025997.5 Mus musculus 95 8e-107 383
WERAM-Anc-0058 ENSACAP00000005857.1 Anolis carolinensis 96 9e-107 383
WERAM-Caf-0119 ENSCAFP00000015780.3 Canis familiaris 96 1e-106 382
WERAM-Pes-0113 ENSPSIP00000013643.1 Pelodiscus sinensis 97 1e-104 375
WERAM-Cap-0079 ENSCPOP00000005709.2 Cavia porcellus 89 6e-102 367
WERAM-Anp-0034 ENSAPLP00000003829.1 Anas platyrhynchos 100 1e-92 336
WERAM-Vip-0036 ENSVPAP00000003145.1 Vicugna pacos 97 3e-92 335
WERAM-Sah-0170 ENSSHAP00000017892.1 Sarcophilus harrisii 96 5e-92 334
WERAM-Lac-0064 ENSLACP00000008810.1 Latimeria chalumnae 83 2e-91 332
WERAM-Meg-0112 ENSMGAP00000011207.2 Meleagris gallopavo 100 9e-91 330
WERAM-Leo-0124 ENSLOCP00000015205.1 Lepisosteus oculatus 84 6e-90 327
WERAM-Dio-0058 ENSDORP00000005294.1 Dipodomys ordii 85 3e-89 325
WERAM-Orn-0003 ENSONIP00000000550.1 Oreochromis niloticus 78 2e-88 322
WERAM-Asm-0216 ENSAMXP00000020915.1 Astyanax mexicanus 77 3e-88 322
WERAM-Dar-0116 ENSDARP00000038215.5 Danio rerio 80 7e-86 313
WERAM-Gaa-0098 ENSGACP00000012540.1 Gasterosteus aculeatus 76 9e-86 313
WERAM-Pof-0213 ENSPFOP00000017186.1 Poecilia formosa 77 2e-85 312
WERAM-Xim-0155 ENSXMAP00000012780.1 Xiphophorus maculatus 76 5e-85 311
WERAM-Orla-0056 ENSORLP00000007459.1 Oryzias latipes 76 1e-84 310
WERAM-Tar-0084 ENSTRUP00000016366.1 Takifugu rubripes 74 3e-84 308
WERAM-Ten-0164 ENSTNIP00000016321.1 Tetraodon nigroviridis 74 4e-84 308
WERAM-Gam-0182 ENSGMOP00000017798.1 Gadus morhua 76 5e-82 301
WERAM-Tut-0090 ENSTTRP00000007470.1 Tursiops truncatus 78 7e-82 300
WERAM-Tas-0066 ENSTSYP00000006045.1 Tarsius syrichta 78 7e-82 300
WERAM-Ere-0065 ENSEEUP00000005400.1 Erinaceus europaeus 77 2e-81 299
WERAM-Chh-0026 ENSCHOP00000002599.1 Choloepus hoffmanni 95 5e-79 291
WERAM-Prc-0158 ENSPCAP00000015111.1 Procavia capensis 95 6e-79 290
WERAM-Pem-0076 ENSPMAP00000008472.1 Petromyzon marinus 67 2e-74 275
WERAM-Ect-0134 ENSETEP00000015345.1 Echinops telfairi 51 5e-48 187
WERAM-Xet-0102 ENSXETP00000033649.2 Xenopus tropicalis 80 6e-46 181
WERAM-Mae-0094 ENSMEUP00000009229.1 Macropus eugenii 62 2e-44 176
WERAM-Drm-0076 FBpp0289146 Drosophila melanogaster 40 5e-23 105
WERAM-Mua-0136 GSMUA_Achr8P34180_001 Musa acuminata 30 2e-11 66.6
WERAM-Pot-0055 POPTR_0004s23810.1 Populus trichocarpa 29 4e-11 65.5
WERAM-Met-0118 KEH32747 Medicago truncatula 29 1e-10 63.9
WERAM-Lab-0003 EDR15018 Laccaria bicolor 32 1e-09 60.8
WERAM-Mel-0026 EGG10984 Melampsora laricipopulina 31 3e-09 59.3
WERAM-Chr-0026 EDP07443 Chlamydomonas reinhardtii 29 1e-07 54.3
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 52 3e-06 49.3
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 52 4e-06 48.9
WERAM-Put-0003 PTTG_02468P0 Puccinia triticina 31 6e-06 48.5
Created Date 25-Jun-2016