WERAM Information

Tag Content
WERAM ID WERAM-Chh-0026
Ensembl Protein ID ENSCHOP00000002599.1
Gene Name SMNDC1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCHOG00000002936.1 ENSCHOT00000002950.1 ENSCHOP00000002599.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 2.40e-13 49.4 73 129
Organism Choloepus hoffmanni
Domain Profile
  Me_Reader Tudor
             Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekgnrlreqy 62 
                           +kvG++++a ws+dG++Y+++i    ++++ ++ + +i++ ++++ +++ L++ +++ e +
  ENSCHOP00000002599.1  73 WKVGDKCMAIWSEDGQCYEAEI----EEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGR 129
                           9*********************....*****************************999876 PP
Protein Sequence
(Fasta)		MSEDLAKQLA SYKAQLQQVE AALSGNGENE DLLKLKKDLQ EVIELTKDLL STQPSETLAS 60
SDSFASTQLT HSWKVGDKCM AIWSEDGQCY EAEIEEIDEE NGTAAITFAG YGNAEVTPLL 120
NLKPVEEGRK AKEDSGNKPM SKKEMIAQQR EYKKKKALKK AQRIKELEQE REDQKVKWQQ 180
FNNRAYSKNK KGQ 193
Nucleotide Sequence
(Fasta)		ATGTCAGAGG ATCTAGCAAA GCAACTGGCA AGCTACAAAG CTCAGCTCCA GCAAGTTGAA 60
GCTGCATTAT CTGGAAATGG AGAAAATGAA GATTTGCTAA AATTGAAAAA AGATTTACAG 120
GAAGTTATAG AACTAACCAA AGACCTTCTT TCAACTCAAC CTTCTGAAAC TCTTGCAAGT 180
TCAGACAGCT TTGCTTCTAC TCAGCTCACT CATTCTTGGA AAGTAGGAGA CAAGTGTATG 240
GCAATCTGGA GTGAAGATGG ACAGTGTTAT GAAGCGGAGA TTGAGGAGAT AGATGAAGAA 300
AATGGCACCG CTGCAATCAC CTTTGCTGGC TATGGCAATG CTGAAGTGAC TCCACTCTTG 360
AACCTCAAGC CTGTAGAAGA AGGAAGGAAG GCAAAGGAGG ATAGTGGCAA CAAACCCATG 420
TCAAAAAAAG AGATGATTGC CCAACAGCGT GAATATAAAA AGAAGAAAGC TTTGAAAAAA 480
GCCCAGAGGA TAAAAGAACT TGAGCAGGAA AGAGAGGACC AGAAAGTGAA ATGGCAACAA 540
TTCAACAACA GAGCCTATTC TAAAAACAAA AAAGGCCAG
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Poa-0026 ENSPPYP00000003078.1 Pongo abelii 99 9e-90 326
WERAM-Paa-0147 ENSPANP00000020975.1 Papio anubis 99 9e-90 326
WERAM-Pat-0022 ENSPTRP00000005182.3 Pan troglodytes 99 9e-90 326
WERAM-Nol-0168 ENSNLEP00000018780.1 Nomascus leucogenys 99 9e-90 326
WERAM-Mup-0020 ENSMPUP00000002068.1 Mustela putorius furo 99 9e-90 326
WERAM-Mam-0060 ENSMMUP00000010218.1 Macaca mulatta 99 9e-90 326
WERAM-Gog-0116 ENSGGOP00000009828.2 Gorilla gorilla 99 9e-90 326
WERAM-Chs-0056 ENSCSAP00000001485.1 Chlorocebus sabaeus 99 9e-90 326
WERAM-Caj-0197 ENSCJAP00000034639.1 Callithrix jacchus 99 9e-90 326
WERAM-Aim-0064 ENSAMEP00000005552.1 Ailuropoda melanoleuca 99 9e-90 326
WERAM-Hos-0101 ENSP00000358605.1 Homo sapiens 99 1e-89 325
WERAM-Loa-0129 ENSLAFP00000012022.2 Loxodonta africana 99 2e-89 325
WERAM-Dan-0107 ENSDNOP00000012705.2 Dasypus novemcinctus 99 3e-89 324
WERAM-Tub-0111 ENSTBEP00000012421.1 Tupaia belangeri 99 3e-89 324
WERAM-Caf-0119 ENSCAFP00000015780.3 Canis familiaris 99 3e-89 324
WERAM-Sus-0214 ENSSSCP00000026180.1 Sus scrofa 99 3e-89 324
WERAM-Ova-0100 ENSOARP00000010198.1 Ovis aries 99 3e-89 324
WERAM-Otg-0012 ENSOGAP00000000511.2 Otolemur garnettii 99 3e-89 324
WERAM-Bot-0005 ENSBTAP00000000722.2 Bos taurus 99 3e-89 324
WERAM-Ict-0061 ENSSTOP00000005452.2 Ictidomys tridecemlineatus 99 4e-89 324
WERAM-Mod-0084 ENSMODP00000013212.2 Monodelphis domestica 98 6e-89 323
WERAM-Orc-0076 ENSOCUP00000007040.2 Oryctolagus cuniculus 98 7e-89 323
WERAM-Ocp-0134 ENSOPRP00000014013.1 Ochotona princeps 98 9e-89 322
WERAM-Mum-0066 ENSMUSP00000025997.5 Mus musculus 98 9e-89 322
WERAM-Fec-0182 ENSFCAP00000025256.1 Felis catus 98 1e-88 322
WERAM-Prc-0158 ENSPCAP00000015111.1 Procavia capensis 98 1e-88 322
WERAM-Ran-0098 ENSRNOP00000020539.5 Rattus norvegicus 98 3e-88 321
WERAM-Soa-0056 ENSSARP00000005482.1 Sorex araneus 98 4e-88 320
WERAM-Myl-0175 ENSMLUP00000014580.1 Myotis lucifugus 98 7e-88 320
WERAM-Ora-0017 ENSOANP00000002552.2 Ornithorhynchus anatinus 97 6e-87 317
WERAM-Cap-0079 ENSCPOP00000005709.2 Cavia porcellus 91 5e-83 303
WERAM-Gaga-0089 ENSGALP00000013929.4 Gallus gallus 95 9e-81 296
WERAM-Tag-0132 ENSTGUP00000010931.1 Taeniopygia guttata 95 1e-80 296
WERAM-Fia-0037 ENSFALP00000002401.1 Ficedula albicollis 95 1e-80 296
WERAM-Anc-0058 ENSACAP00000005857.1 Anolis carolinensis 93 4e-80 294
WERAM-Pes-0113 ENSPSIP00000013643.1 Pelodiscus sinensis 96 6e-80 293
WERAM-Dio-0058 ENSDORP00000005294.1 Dipodomys ordii 99 7e-74 273
WERAM-Vip-0036 ENSVPAP00000003145.1 Vicugna pacos 99 1e-72 269
WERAM-Sah-0170 ENSSHAP00000017892.1 Sarcophilus harrisii 98 1e-72 269
WERAM-Lac-0064 ENSLACP00000008810.1 Latimeria chalumnae 80 9e-68 253
WERAM-Leo-0124 ENSLOCP00000015205.1 Lepisosteus oculatus 81 7e-67 250
WERAM-Anp-0034 ENSAPLP00000003829.1 Anas platyrhynchos 95 3e-65 244
WERAM-Meg-0112 ENSMGAP00000011207.2 Meleagris gallopavo 94 2e-63 239
WERAM-Orn-0003 ENSONIP00000000550.1 Oreochromis niloticus 72 6e-62 233
WERAM-Asm-0216 ENSAMXP00000020915.1 Astyanax mexicanus 72 3e-60 228
WERAM-Dar-0116 ENSDARP00000038215.5 Danio rerio 75 4e-60 227
WERAM-Gaa-0098 ENSGACP00000012540.1 Gasterosteus aculeatus 71 5e-60 227
WERAM-Tar-0084 ENSTRUP00000016366.1 Takifugu rubripes 70 5e-60 227
WERAM-Ten-0164 ENSTNIP00000016321.1 Tetraodon nigroviridis 70 4e-59 224
WERAM-Gam-0182 ENSGMOP00000017798.1 Gadus morhua 74 1e-58 223
WERAM-Orla-0056 ENSORLP00000007459.1 Oryzias latipes 72 5e-58 221
WERAM-Xim-0155 ENSXMAP00000012780.1 Xiphophorus maculatus 70 5e-58 220
WERAM-Pof-0213 ENSPFOP00000017186.1 Poecilia formosa 71 2e-57 218
WERAM-Tut-0090 ENSTTRP00000007470.1 Tursiops truncatus 75 2e-55 211
WERAM-Tas-0066 ENSTSYP00000006045.1 Tarsius syrichta 75 2e-55 211
WERAM-Ere-0065 ENSEEUP00000005400.1 Erinaceus europaeus 74 1e-54 209
WERAM-Pem-0076 ENSPMAP00000008472.1 Petromyzon marinus 63 3e-49 191
WERAM-Xet-0102 ENSXETP00000033649.2 Xenopus tropicalis 82 8e-49 190
WERAM-Ect-0134 ENSETEP00000015345.1 Echinops telfairi 54 6e-24 107
WERAM-Mae-0094 ENSMEUP00000009229.1 Macropus eugenii 54 9e-24 107
WERAM-Drm-0076 FBpp0289146 Drosophila melanogaster 39 7e-13 70.9
WERAM-Mua-0136 GSMUA_Achr8P34180_001 Musa acuminata 35 5e-10 61.6
WERAM-Prp-0076 EMJ24376 Prunus persica 31 3e-09 58.5
WERAM-Met-0118 KEH32747 Medicago truncatula 31 4e-09 58.5
WERAM-Lab-0003 EDR15018 Laccaria bicolor 36 4e-09 58.5
WERAM-Pot-0055 POPTR_0004s23810.1 Populus trichocarpa 35 7e-09 57.8
WERAM-Lep-0085 LPERR08G00910.1 Leersia perrieri 32 1e-07 53.5
WERAM-Sol-0019 Solyc01g103020.2.1 Solanum lycopersicum 31 2e-07 52.4
WERAM-Glm-0215 GLYMA17G00560.1 Glycine max 30 2e-07 52.4
WERAM-Orbr-0094 OB08G10830.1 Oryza brachyantha 32 3e-07 52.0
WERAM-Brr-0132 Bra026585.1-P Brassica rapa 31 5e-07 51.2
WERAM-Sot-0061 PGSC0003DMT400053385 Solanum tuberosum 31 8e-07 50.8
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 52 1e-06 50.4
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 52 1e-06 50.1
WERAM-Art-0036 AT2G02570.1 Arabidopsis thaliana 29 2e-06 49.3
WERAM-Arl-0131 scaffold_500192.1 Arabidopsis lyrata 30 3e-06 48.5
WERAM-Sob-0098 Sb07g001010.1 Sorghum bicolor 31 4e-06 48.5
WERAM-Chr-0026 EDP07443 Chlamydomonas reinhardtii 31 4e-06 48.1
WERAM-Zem-0007 GRMZM2G005737_P01 Zea mays 31 5e-06 48.1
WERAM-Sei-0072 Si017933m Setaria italica 32 7e-06 47.8
WERAM-Orr-0090 ORUFI08G00760.1 Oryza rufipogon 33 7e-06 47.8
WERAM-Orni-0085 ONIVA08G00730.1 Oryza nivara 33 7e-06 47.8
WERAM-Ori-0093 BGIOSGA027775-PA Oryza indica 33 7e-06 47.8
WERAM-Orgl-0084 OGLUM08G00790.1 Oryza glumaepatula 33 7e-06 47.8
WERAM-Org-0087 ORGLA08G0001000.1 Oryza glaberrima 33 7e-06 47.8
WERAM-Orb-0087 OBART08G00720.1 Oryza barthii 33 7e-06 47.8
Created Date 25-Jun-2016