WERAM Information

Tag Content
WERAM ID WERAM-Lac-0064
Ensembl Protein ID ENSLACP00000008810.1
Gene Name SMNDC1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000007784.1 ENSLACT00000008879.1 ENSLACP00000008810.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 6.10e-12 45.8 73 127
Organism Latimeria chalumnae
Domain Profile
  Me_Reader Tudor
             Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekgnrlre 60 
                           + vG++++a w++dG+fY+++i    ++++ ++++ +i++ ++++  +  L++ ++l e
  ENSLACP00000008810.1  73 WQVGDYCMAVWNEDGQFYKAEI----EEIDEENSTAAITFMGYGNADVIPLLSLKPLEE 127
                           89********************....**************************9998876 PP
Protein Sequence
(Fasta)		MSDDLAKQLA GYKAQLQQVE AALSTDPENE DLLKLQKDLQ EVIELTKDLL STQPTVATAS 60
SDSTNTVVPS HAWQVGDYCM AVWNEDGQFY KAEIEEIDEE NSTAAITFMG YGNADVIPLL 120
SLKPLEEGGQ ADDESGGKPK SKKEIIAQQR EYKKKKALKK AQRMKELEQE REDQKVKWQQ 180
FNNRAYSKNK KGQVKRSIFA SPESVTGKVG VGTCGIADKP MTQYQDTSKY NVRHLMPQ 238
Nucleotide Sequence
(Fasta)		GTTTCACGTG AGAAAATAAG AACTCTCGCG AGGTTTGGCT CCGGGAAAAG GGGGGGGTGG 60
TTTTCGTTTA GAGAAAAAAA GAAGTGAAGC CTGGGAACTT TAGTGGAACA GCTGCTGGCT 120
AAGAAGCAAA ATTCCTTCTC CTTCCCGGAA AAAAAAAAAA ATCTACATCA AACAGAGATG 180
TCCGATGATC TGGCAAAACA GTTAGCTGGT TACAAGGCTC AGCTTCAGCA GGTGGAAGCT 240
GCACTTTCAA CAGATCCAGA GAATGAAGAC CTGCTCAAAC TACAGAAGGA TTTACAGGAA 300
GTTATAGAAC TAACCAAAGA CCTACTGTCA ACACAACCCA CTGTAGCAAC AGCTAGTTCA 360
GACAGCACTA ACACTGTTGT GCCAAGCCAT GCCTGGCAAG TTGGAGATTA TTGTATGGCA 420
GTCTGGAATG AAGATGGACA GTTCTACAAG GCGGAAATTG AAGAGATAGA TGAGGAGAAC 480
AGCACTGCTG CCATCACATT TATGGGTTAT GGCAACGCAG ATGTTATACC ACTGCTCAGT 540
CTCAAACCCC TAGAAGAAGG AGGACAAGCA GATGACGAGA GTGGTGGCAA GCCCAAATCT 600
AAGAAAGAGA TAATTGCCCA GCAAAGGGAG TATAAAAAGA AGAAGGCTTT GAAAAAGGCA 660
CAGAGGATGA AGGAGCTTGA ACAGGAGCGA GAGGATCAGA AAGTGAAGTG GCAGCAGTTC 720
AACAACAGAG CCTATTCAAA GAACAAGAAA GGGCAGGTGA AGAGGAGTAT TTTCGCTTCT 780
CCTGAGAGTG TGACTGGTAA AGTCGGGGTG GGGACGTGTG GGATTGCAGA CAAGCCAATG 840
ACACAGTACC AGGACACATC AAAGTACAAT GTGAGGCATC TCATGCCACA GTAACATGGA 900
GTGACTGAGC AAGTTCATCA CTATAGAGCT TTGCATTTAC TCTGTCCTTT ACTGGAGAAT 960
TACTGTAAAC TTTGGAGAAT GTGAGATTGT TACAGCTGAT TGTTTTTCAT GTATATATTC 1020
TTGGTCTTTA TTTCTCATGG ATAAAATTTT GCTGTCTTTC TGCATTTGCA ACTGATCACC 1080
TGGAATATTT TTTTTTTTTT TTTTTTTTTT TTGTACACAA GAGGATAAAT GCCTATACAA 1140
TTACACATAC TGTGGTTTGT TTTGGTGTTT AGCACTTAAA CAGTCTGGCA CCACTAAAAA 1200
ATATCAGTTA AGCACAAAAA GTGTTCTAGA GCTGTACCTG TTGTGCTGTT GAAACATTTG 1260
CTAGCTAGTT CATCACAGCG TGCATATTTA AGAGTCGCAG TATTTACACA TTCCAGCCAA 1320
TGAAATTGTG ATTCACAAAG TGAATCAAAC TCCAGTGTGA CAAGATATAT ACTCAGATTG 1380
ATTACAGAAG GGTGGGTAGG GGTGGTTCAT CCTTTTTCAG CATAATTTAC AATACTTGTC 1440
ATCTACACAT AAGCAGGTTT TACAGACATG CCCCCAGCCT TCAGTAAAGG ACATTAGTTC 1500
ATGTATAGCC TTGTAAACTA GGTTAAAAAA AAATCTAGGG CTGTGTTAAT GGACAAGTGT 1560
ACGCATAAGC TTTATATTCA TGCCAGTGGC TGTTCTACTA TGGTAGACTT ATGTTCTTTT 1620
ATTTTGCCCT TTTTTTTCCC TTTGTTTTTG TTTCTCTTGT ATGTCCTTTT CTTGTAGTGC 1680
ATTTTATGCT TCTGTAAGCC AAGCTGGGGG TCATATTGAA GCACTGAGTG TTAAAGGTCT 1740
GACAGTTACC TATTTTATAC AAAAGGTAAA CAAAGTATCT GATTAGCTAG CACATACTGC 1800
TATTAAAACA GGTTTTTCCT ATTTATGGAG GATTGAGACT TTTATGAGAA GTATGTTTAA 1860
TTTTCAGTTT TGTATGTAAC TTTTATCAAA TAAAAGTACT AAAAACAAAT TCCACTTGTG 1920
TTTTTTTTTT TTACAAAACA ATTGTTTATC CAGGATAGAT AACTGAGATG TGACATCTCC 1980
1981
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ora-0017 ENSOANP00000002552.2 Ornithorhynchus anatinus 84 3e-104 374
WERAM-Hos-0101 ENSP00000358605.1 Homo sapiens 84 6e-104 374
WERAM-Mod-0084 ENSMODP00000013212.2 Monodelphis domestica 84 6e-104 373
WERAM-Sus-0214 ENSSSCP00000026180.1 Sus scrofa 84 8e-104 373
WERAM-Poa-0026 ENSPPYP00000003078.1 Pongo abelii 84 9e-104 373
WERAM-Paa-0147 ENSPANP00000020975.1 Papio anubis 84 9e-104 373
WERAM-Pat-0022 ENSPTRP00000005182.3 Pan troglodytes 84 9e-104 373
WERAM-Nol-0168 ENSNLEP00000018780.1 Nomascus leucogenys 84 9e-104 373
WERAM-Mup-0020 ENSMPUP00000002068.1 Mustela putorius furo 84 9e-104 373
WERAM-Mam-0060 ENSMMUP00000010218.1 Macaca mulatta 84 9e-104 373
WERAM-Gog-0116 ENSGGOP00000009828.2 Gorilla gorilla 84 9e-104 373
WERAM-Chs-0056 ENSCSAP00000001485.1 Chlorocebus sabaeus 84 9e-104 373
WERAM-Caj-0197 ENSCJAP00000034639.1 Callithrix jacchus 84 9e-104 373
WERAM-Aim-0064 ENSAMEP00000005552.1 Ailuropoda melanoleuca 84 9e-104 373
WERAM-Ict-0061 ENSSTOP00000005452.2 Ictidomys tridecemlineatus 84 1e-103 373
WERAM-Dar-0116 ENSDARP00000038215.5 Danio rerio 79 1e-103 373
WERAM-Orc-0076 ENSOCUP00000007040.2 Oryctolagus cuniculus 84 1e-103 372
WERAM-Soa-0056 ENSSARP00000005482.1 Sorex araneus 84 1e-103 372
WERAM-Loa-0129 ENSLAFP00000012022.2 Loxodonta africana 84 2e-103 372
WERAM-Ova-0100 ENSOARP00000010198.1 Ovis aries 84 2e-103 372
WERAM-Otg-0012 ENSOGAP00000000511.2 Otolemur garnettii 84 2e-103 372
WERAM-Bot-0005 ENSBTAP00000000722.2 Bos taurus 84 2e-103 372
WERAM-Ocp-0134 ENSOPRP00000014013.1 Ochotona princeps 84 3e-103 371
WERAM-Myl-0175 ENSMLUP00000014580.1 Myotis lucifugus 84 3e-103 371
WERAM-Tub-0111 ENSTBEP00000012421.1 Tupaia belangeri 84 3e-103 371
WERAM-Dan-0107 ENSDNOP00000012705.2 Dasypus novemcinctus 84 3e-103 371
WERAM-Mum-0066 ENSMUSP00000025997.5 Mus musculus 84 7e-103 370
WERAM-Fec-0182 ENSFCAP00000025256.1 Felis catus 83 1e-102 369
WERAM-Caf-0119 ENSCAFP00000015780.3 Canis familiaris 84 1e-102 369
WERAM-Leo-0124 ENSLOCP00000015205.1 Lepisosteus oculatus 84 1e-102 369
WERAM-Ran-0098 ENSRNOP00000020539.5 Rattus norvegicus 84 3e-102 368
WERAM-Asm-0216 ENSAMXP00000020915.1 Astyanax mexicanus 77 2e-100 362
WERAM-Tag-0132 ENSTGUP00000010931.1 Taeniopygia guttata 83 2e-100 362
WERAM-Fia-0037 ENSFALP00000002401.1 Ficedula albicollis 83 2e-100 362
WERAM-Gaga-0089 ENSGALP00000013929.4 Gallus gallus 83 2e-100 362
WERAM-Gaa-0098 ENSGACP00000012540.1 Gasterosteus aculeatus 75 1e-99 359
WERAM-Pes-0113 ENSPSIP00000013643.1 Pelodiscus sinensis 85 2e-99 358
WERAM-Orn-0003 ENSONIP00000000550.1 Oreochromis niloticus 75 3e-99 358
WERAM-Cap-0079 ENSCPOP00000005709.2 Cavia porcellus 78 4e-98 354
WERAM-Anc-0058 ENSACAP00000005857.1 Anolis carolinensis 83 8e-98 353
WERAM-Tar-0084 ENSTRUP00000016366.1 Takifugu rubripes 74 7e-97 350
WERAM-Xim-0155 ENSXMAP00000012780.1 Xiphophorus maculatus 74 9e-97 350
WERAM-Orla-0056 ENSORLP00000007459.1 Oryzias latipes 76 1e-96 349
WERAM-Pof-0213 ENSPFOP00000017186.1 Poecilia formosa 75 2e-96 348
WERAM-Ten-0164 ENSTNIP00000016321.1 Tetraodon nigroviridis 74 1e-95 346
WERAM-Gam-0182 ENSGMOP00000017798.1 Gadus morhua 79 7e-92 333
WERAM-Pem-0076 ENSPMAP00000008472.1 Petromyzon marinus 65 5e-85 310
WERAM-Sah-0170 ENSSHAP00000017892.1 Sarcophilus harrisii 84 9e-85 310
WERAM-Vip-0036 ENSVPAP00000003145.1 Vicugna pacos 84 1e-84 309
WERAM-Dio-0058 ENSDORP00000005294.1 Dipodomys ordii 73 2e-84 309
WERAM-Meg-0112 ENSMGAP00000011207.2 Meleagris gallopavo 75 4e-82 301
WERAM-Anp-0034 ENSAPLP00000003829.1 Anas platyrhynchos 83 1e-81 299
WERAM-Ere-0065 ENSEEUP00000005400.1 Erinaceus europaeus 70 3e-76 281
WERAM-Prc-0158 ENSPCAP00000015111.1 Procavia capensis 80 7e-74 274
WERAM-Chh-0026 ENSCHOP00000002599.1 Choloepus hoffmanni 80 2e-73 272
WERAM-Tut-0090 ENSTTRP00000007470.1 Tursiops truncatus 70 5e-71 264
WERAM-Tas-0066 ENSTSYP00000006045.1 Tarsius syrichta 70 5e-71 264
WERAM-Mae-0094 ENSMEUP00000009229.1 Macropus eugenii 57 6e-50 194
WERAM-Ect-0134 ENSETEP00000015345.1 Echinops telfairi 48 2e-42 169
WERAM-Xet-0102 ENSXETP00000033649.2 Xenopus tropicalis 65 3e-42 169
WERAM-Drm-0076 FBpp0289146 Drosophila melanogaster 42 1e-32 136
WERAM-Lab-0003 EDR15018 Laccaria bicolor 34 8e-22 100
WERAM-Mua-0136 GSMUA_Achr8P34180_001 Musa acuminata 31 9e-18 87.4
WERAM-Prp-0076 EMJ24376 Prunus persica 28 8e-17 84.3
WERAM-Pot-0055 POPTR_0004s23810.1 Populus trichocarpa 28 9e-17 84.3
WERAM-Lep-0085 LPERR08G00910.1 Leersia perrieri 29 8e-16 81.3
WERAM-Orbr-0094 OB08G10830.1 Oryza brachyantha 29 2e-15 79.7
WERAM-Orr-0090 ORUFI08G00760.1 Oryza rufipogon 29 2e-15 79.7
WERAM-Orni-0085 ONIVA08G00730.1 Oryza nivara 29 2e-15 79.7
WERAM-Ori-0093 BGIOSGA027775-PA Oryza indica 29 2e-15 79.7
WERAM-Orgl-0084 OGLUM08G00790.1 Oryza glumaepatula 29 2e-15 79.7
WERAM-Org-0087 ORGLA08G0001000.1 Oryza glaberrima 29 2e-15 79.7
WERAM-Orb-0087 OBART08G00720.1 Oryza barthii 29 2e-15 79.7
WERAM-Met-0118 KEH32747 Medicago truncatula 28 3e-15 79.3
WERAM-Sob-0098 Sb07g001010.1 Sorghum bicolor 27 4e-15 78.6
WERAM-Mel-0026 EGG10984 Melampsora laricipopulina 29 8e-15 77.8
WERAM-Zem-0007 GRMZM2G005737_P01 Zea mays 27 2e-14 76.6
WERAM-Brr-0132 Bra026585.1-P Brassica rapa 30 2e-14 76.3
WERAM-Glm-0215 GLYMA17G00560.1 Glycine max 27 3e-14 76.3
WERAM-Put-0003 PTTG_02468P0 Puccinia triticina 30 6e-14 75.1
WERAM-Amt-0087 ERM99754 Amborella trichopoda 28 7e-14 74.7
WERAM-Sei-0072 Si017933m Setaria italica 28 2e-13 73.6
WERAM-Sol-0019 Solyc01g103020.2.1 Solanum lycopersicum 28 2e-13 73.2
WERAM-Viv-0076 VIT_12s0035g01830.t01 Vitis vinifera 26 2e-13 73.2
WERAM-Arl-0131 scaffold_500192.1 Arabidopsis lyrata 29 2e-13 73.2
WERAM-Art-0036 AT2G02570.1 Arabidopsis thaliana 28 6e-13 71.6
WERAM-Crn-0013 AAW42334 Cryptococcus neoformans 31 6e-13 71.6
WERAM-Pug-0026 EFP86213 Puccinia graminis 29 6e-13 71.6
WERAM-Sot-0061 PGSC0003DMT400053385 Solanum tuberosum 27 9e-13 70.9
WERAM-Bro-0128 Bo7g080510.1 Brassica oleracea 29 2e-12 70.1
WERAM-Orl-0027 KN538777.1_FGP011 Oryza longistaminata 29 4e-12 68.9
WERAM-Brd-0073 BRADI3G13410.3 Brachypodium distachyon 28 2e-11 67.0
WERAM-Spr-0036 CBQ69725 Sporisorium reilianum 34 3e-11 65.9
WERAM-Chr-0026 EDP07443 Chlamydomonas reinhardtii 28 4e-10 62.0
WERAM-Tra-0312 Traes_7BL_DB71F86C2.1 Triticum aestivum 27 5e-10 61.6
WERAM-Scj-0021 EEB07806 Schizosaccharomyces japonicus 24 2e-09 60.1
WERAM-Tru-0060 TRIUR3_24898-P1 Triticum urartu 28 2e-09 60.1
WERAM-Asn-0007 CADANIAP00000614 Aspergillus nidulans 24 4e-09 58.9
WERAM-Ors-0078 OS08T0109900-01 Oryza sativa 28 9e-09 57.8
WERAM-Tum-0016 CAZ83345 Tuber melanosporum 31 2e-08 57.0
WERAM-Miv-0027 MVLG_03912T0 Microbotryum violaceum 26 2e-08 56.2
WERAM-Ptv-0110 ENSPVAP00000009939.1 Pteropus vampyrus 37 4e-08 55.8
WERAM-Orp-0083 OPUNC08G00700.1 Oryza punctata 28 4e-08 55.5
WERAM-Asni-0027 CADANGAP00008951 Aspergillus niger 25 2e-07 53.5
WERAM-Scp-0041 SPCC1281.02c.1:pep Schizosaccharomyces pombe 30 2e-07 53.5
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 43 2e-07 53.1
WERAM-Hov-0008 MLOC_11731.5 Hordeum vulgare 27 4e-07 52.4
WERAM-Cii-0010 ENSCINP00000003758.3 Ciona intestinalis 43 5e-07 52.0
WERAM-Pyt-0011 EFQ93329 Pyrenophora teres 30 5e-07 52.0
WERAM-Pytr-0037 EDU44508 Pyrenophora triticirepentis 30 7e-07 51.6
WERAM-Asfu-0027 CADAFUAP00006079 Aspergillus fumigatus 35 1e-06 50.4
WERAM-Trr-0006 EGR49247 Trichoderma reesei 25 2e-06 49.7
WERAM-Scs-0003 EDN91297 Sclerotinia sclerotiorum 39 2e-06 49.7
WERAM-Aet-0098 EMT15367 Aegilops tauschii 27 3e-06 49.7
Created Date 25-Jun-2016