WERAM Information

Tag Content
WERAM ID WERAM-Sah-0170
Ensembl Protein ID ENSSHAP00000017892.1
Gene Name SMNDC1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSHAG00000015189.1 ENSSHAT00000018040.1 ENSSHAP00000017892.1
ENSSHAG00000015189.1 ENSSHAT00000018041.1 ENSSHAP00000017893.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 4.10e-13 49.5 34 90
Organism Sarcophilus harrisii
Domain Profile
  Me_Reader Tudor
             Tudor.txt  2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekgnrlreqy 62
                          +kvG++++a ws+dG++Y+++i    ++++ ++ + +i++ ++++ +++ L++ +++ e +
  ENSSHAP00000017892.1 34 WKVGDKCMAVWSEDGQCYEAEI----EEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGR 90
                          9*********************....*****************************999876 PP
Protein Sequence
(Fasta)		MEVIELTKDL LSTQPSETLA SSDSFASAQP THSWKVGDKC MAVWSEDGQC YEAEIEEIDE 60
ENGTAAITFA GYGNAEVTPL LNLKPVEEGR KAKEDSGNKP MSKKEMIAQQ REYKKKKALK 120
KAQRIKELEQ EREDQKVKWQ QFNNRAYSKN KKGQVKRSIF ASPESVTGKV GVGTCGIADK 180
PMTQYQDTSK YNVRHLMPQ 199
Nucleotide Sequence
(Fasta)		GTCGAGTCGT CGCCGTTGCC GCCGCTAAGG AAAAAAGTCG GTGCTGCTGC CGCTGTCATT 60
GTCCGGCCTT GTGGCCCCAC CCTTTGCTGC CGCCGCCGCC TCGGCTCCGG CCCCGGCTCC 120
GGCCCCGGCC CTATAAAAGA TGTCTGAAGA TCTAGCAAAG CAGCTGGCTA GCTACAAGGC 180
TCAGCTTCAA CAAGTTGAGG CAGCATTATC TGGGAATGGA GAAAATGAAG ACTTGCTAAA 240
ATTGAAAAAA GATTTGCAAT GGCTCTCTGC ATCCCCGAAA CGCCTTCCTT CAGTAAGCAC 300
AGTGCTTGGG TGCACCCCCT TTGACCTGCT GATATGTATA TCACAACTCC TGATGCTTCC 360
TGGAATTGCC GATTACTGTA ACTGCTGCCC ATCTGTCAAT GAAGGAGCAG TTTCAGAACT 420
CAGACATGGG GGAGGAAAAG TTAATTAATG GAAGTTATAG AACTAACCAA AGATCTTCTT 480
TCAACCCAAC CTTCGGAAAC CCTTGCAAGT TCAGACAGTT TTGCTTCTGC TCAGCCCACT 540
CACTCCTGGA AAGTAGGAGA CAAATGTATG GCAGTCTGGA GTGAAGATGG ACAGTGTTAT 600
GAAGCAGAGA TTGAAGAGAT AGATGAAGAA AATGGGACTG CTGCCATCAC ATTTGCTGGT 660
TATGGTAATG CTGAAGTCAC ACCTCTACTA AATTTGAAGC CAGTAGAAGA AGGAAGGAAG 720
GCAAAAGAAG ACAGTGGAAA TAAGCCCATG TCAAAAAAAG AAATGATTGC CCAGCAACGA 780
GAATATAAAA AGAAGAAGGC TTTGAAAAAA GCTCAAAGAA TAAAAGAACT TGAACAGGAA 840
AGAGAGGACC AGAAGGTGAA ATGGCAACAG TTCAACAATA GAGCCTATTC TAAAAATAAA 900
AAAGGCCAGG TAAAAAGGAG TATTTTTGCC TCACCTGAGA GTGTAACTGG CAAAGTTGGA 960
GTAGGAACTT GTGGAATTGC TGATAAACCC ATGACACAGT ATCAGGATAC CTCTAAATAC 1020
AATGTCAGGC ACTTGATGCC TCAGTAATCA GAAACTGGTG GATTTCATCT CTGCAGGGCT 1080
TTACATTTAC CTTTTTATCC TTATATTTTT CTAAAGGTAA ATTATTTGTT AGATAGTAAG 1140
GAAGAGACCA TTGTCATCAT TATCCGACTT CAAACAATAG ACTGAGACTT GAAGAAATTG 1200
CATTTGATAA CTGCTTTTCA GTTCACTTTC TTCATTACTA CCATTTTCCC CAGAATATAT 1260
CCTGTAATGC AACTTTTGTA GACAGACGCT GCCTAAATTC AGCACTTAGA TGAAGTGTTT 1320
ACCTTCCAAA TATCAGACTT TGCCACATAC CTAAGAATTG TACCCTTTCC AAGTTATAAC 1380
TTGCAACTTT CAAATGCTTT GAATTTGCCA CCGTATTCCA GCAGCCTTTG GAGCTTCATG 1440
1441
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mod-0084 ENSMODP00000013212.2 Monodelphis domestica 100 2e-103 371
WERAM-Ict-0061 ENSSTOP00000005452.2 Ictidomys tridecemlineatus 99 4e-103 370
WERAM-Hos-0101 ENSP00000358605.1 Homo sapiens 99 8e-103 369
WERAM-Poa-0026 ENSPPYP00000003078.1 Pongo abelii 99 1e-102 369
WERAM-Paa-0147 ENSPANP00000020975.1 Papio anubis 99 1e-102 369
WERAM-Pat-0022 ENSPTRP00000005182.3 Pan troglodytes 99 1e-102 369
WERAM-Nol-0168 ENSNLEP00000018780.1 Nomascus leucogenys 99 1e-102 369
WERAM-Mup-0020 ENSMPUP00000002068.1 Mustela putorius furo 99 1e-102 369
WERAM-Mam-0060 ENSMMUP00000010218.1 Macaca mulatta 99 1e-102 369
WERAM-Gog-0116 ENSGGOP00000009828.2 Gorilla gorilla 99 1e-102 369
WERAM-Chs-0056 ENSCSAP00000001485.1 Chlorocebus sabaeus 99 1e-102 369
WERAM-Caj-0197 ENSCJAP00000034639.1 Callithrix jacchus 99 1e-102 369
WERAM-Aim-0064 ENSAMEP00000005552.1 Ailuropoda melanoleuca 99 1e-102 369
WERAM-Vip-0036 ENSVPAP00000003145.1 Vicugna pacos 99 2e-102 368
WERAM-Loa-0129 ENSLAFP00000012022.2 Loxodonta africana 98 2e-102 368
WERAM-Ova-0100 ENSOARP00000010198.1 Ovis aries 98 4e-102 367
WERAM-Otg-0012 ENSOGAP00000000511.2 Otolemur garnettii 98 4e-102 367
WERAM-Bot-0005 ENSBTAP00000000722.2 Bos taurus 98 4e-102 367
WERAM-Tub-0111 ENSTBEP00000012421.1 Tupaia belangeri 98 4e-102 367
WERAM-Sus-0214 ENSSSCP00000026180.1 Sus scrofa 98 5e-102 367
WERAM-Myl-0175 ENSMLUP00000014580.1 Myotis lucifugus 98 7e-102 366
WERAM-Mum-0066 ENSMUSP00000025997.5 Mus musculus 99 9e-102 366
WERAM-Orc-0076 ENSOCUP00000007040.2 Oryctolagus cuniculus 98 1e-101 366
WERAM-Fec-0182 ENSFCAP00000025256.1 Felis catus 98 1e-101 365
WERAM-Ocp-0134 ENSOPRP00000014013.1 Ochotona princeps 98 2e-101 365
WERAM-Dan-0107 ENSDNOP00000012705.2 Dasypus novemcinctus 99 2e-101 365
WERAM-Soa-0056 ENSSARP00000005482.1 Sorex araneus 98 2e-101 364
WERAM-Ora-0017 ENSOANP00000002552.2 Ornithorhynchus anatinus 98 3e-101 364
WERAM-Ran-0098 ENSRNOP00000020539.5 Rattus norvegicus 98 3e-101 364
WERAM-Caf-0119 ENSCAFP00000015780.3 Canis familiaris 99 3e-101 364
WERAM-Cap-0079 ENSCPOP00000005709.2 Cavia porcellus 90 8e-96 346
WERAM-Tag-0132 ENSTGUP00000010931.1 Taeniopygia guttata 96 4e-95 344
WERAM-Fia-0037 ENSFALP00000002401.1 Ficedula albicollis 96 4e-95 344
WERAM-Gaga-0089 ENSGALP00000013929.4 Gallus gallus 96 4e-95 343
WERAM-Anp-0034 ENSAPLP00000003829.1 Anas platyrhynchos 96 3e-94 341
WERAM-Anc-0058 ENSACAP00000005857.1 Anolis carolinensis 95 3e-93 337
WERAM-Pes-0113 ENSPSIP00000013643.1 Pelodiscus sinensis 98 2e-92 335
WERAM-Meg-0112 ENSMGAP00000011207.2 Meleagris gallopavo 96 9e-91 329
WERAM-Lac-0064 ENSLACP00000008810.1 Latimeria chalumnae 84 7e-85 310
WERAM-Dio-0058 ENSDORP00000005294.1 Dipodomys ordii 86 1e-83 306
WERAM-Leo-0124 ENSLOCP00000015205.1 Lepisosteus oculatus 84 9e-82 300
WERAM-Dar-0116 ENSDARP00000038215.5 Danio rerio 79 6e-78 286
WERAM-Orn-0003 ENSONIP00000000550.1 Oreochromis niloticus 76 2e-77 285
WERAM-Asm-0216 ENSAMXP00000020915.1 Astyanax mexicanus 76 1e-76 282
WERAM-Gaa-0098 ENSGACP00000012540.1 Gasterosteus aculeatus 75 2e-76 281
WERAM-Tar-0084 ENSTRUP00000016366.1 Takifugu rubripes 74 3e-75 278
WERAM-Orla-0056 ENSORLP00000007459.1 Oryzias latipes 76 2e-74 275
WERAM-Xim-0155 ENSXMAP00000012780.1 Xiphophorus maculatus 74 1e-73 272
WERAM-Ten-0164 ENSTNIP00000016321.1 Tetraodon nigroviridis 74 1e-73 272
WERAM-Prc-0158 ENSPCAP00000015111.1 Procavia capensis 99 2e-73 272
WERAM-Tut-0090 ENSTTRP00000007470.1 Tursiops truncatus 100 4e-73 271
WERAM-Tas-0066 ENSTSYP00000006045.1 Tarsius syrichta 100 4e-73 271
WERAM-Pof-0213 ENSPFOP00000017186.1 Poecilia formosa 75 8e-73 270
WERAM-Chh-0026 ENSCHOP00000002599.1 Choloepus hoffmanni 98 1e-72 269
WERAM-Ere-0065 ENSEEUP00000005400.1 Erinaceus europaeus 99 1e-72 269
WERAM-Gam-0182 ENSGMOP00000017798.1 Gadus morhua 76 4e-72 267
WERAM-Pem-0076 ENSPMAP00000008472.1 Petromyzon marinus 67 2e-65 245
WERAM-Mae-0094 ENSMEUP00000009229.1 Macropus eugenii 59 7e-47 183
WERAM-Ect-0134 ENSETEP00000015345.1 Echinops telfairi 68 1e-45 179
WERAM-Xet-0102 ENSXETP00000033649.2 Xenopus tropicalis 81 8e-36 147
WERAM-Drm-0076 FBpp0289146 Drosophila melanogaster 38 2e-17 85.9
WERAM-Pot-0055 POPTR_0004s23810.1 Populus trichocarpa 29 8e-10 60.8
WERAM-Mua-0136 GSMUA_Achr8P34180_001 Musa acuminata 30 2e-09 59.3
WERAM-Orbr-0094 OB08G10830.1 Oryza brachyantha 30 3e-09 58.9
WERAM-Lab-0003 EDR15018 Laccaria bicolor 30 5e-09 58.2
WERAM-Lep-0085 LPERR08G00910.1 Leersia perrieri 30 6e-09 57.8
WERAM-Sob-0098 Sb07g001010.1 Sorghum bicolor 29 3e-08 55.8
WERAM-Orr-0090 ORUFI08G00760.1 Oryza rufipogon 30 9e-08 53.9
WERAM-Orni-0085 ONIVA08G00730.1 Oryza nivara 30 9e-08 53.9
WERAM-Ori-0093 BGIOSGA027775-PA Oryza indica 30 9e-08 53.9
WERAM-Orgl-0084 OGLUM08G00790.1 Oryza glumaepatula 30 9e-08 53.9
WERAM-Org-0087 ORGLA08G0001000.1 Oryza glaberrima 30 9e-08 53.9
WERAM-Orb-0087 OBART08G00720.1 Oryza barthii 30 9e-08 53.9
WERAM-Zem-0007 GRMZM2G005737_P01 Zea mays 27 9e-08 53.9
WERAM-Ors-0078 OS08T0109900-01 Oryza sativa 30 1e-07 53.9
WERAM-Orl-0027 KN538777.1_FGP011 Oryza longistaminata 29 2e-07 53.1
WERAM-Sei-0072 Si017933m Setaria italica 28 5e-07 51.6
WERAM-Mel-0026 EGG10984 Melampsora laricipopulina 31 8e-07 50.8
WERAM-Orp-0083 OPUNC08G00700.1 Oryza punctata 30 9e-07 50.4
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 38 1e-06 50.4
WERAM-Chr-0026 EDP07443 Chlamydomonas reinhardtii 28 2e-06 49.3
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 50 3e-06 49.3
WERAM-Put-0003 PTTG_02468P0 Puccinia triticina 33 4e-06 48.5
Created Date 25-Jun-2016