WERAM Information

Tag Content
WERAM ID WERAM-Ran-0098
Ensembl Protein ID ENSRNOP00000020539.5
Gene Name Smndc1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000014833.7 ENSRNOT00000020539.7 ENSRNOP00000020539.5
ENSRNOG00000014833.7 ENSRNOT00000076121.2 ENSRNOP00000068081.1
ENSRNOG00000014833.7 ENSRNOT00000078670.1 ENSRNOP00000071875.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 6.30e-11 42.9 73 129
Organism Rattus norvegicus
Domain Profile
  Me_Reader Tudor
             Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekgnrlreqy 62 
                           +kvG++++a ws+dG++Y+++i    ++++ ++ + +i++  +++ +++ L++ +++ e +
  ENSRNOP00000020539.5  73 WKVGDKCMAVWSEDGQCYEAEI----EEIDEENGTAAITFAVYGNAEVTPLLNLKPVEEGR 129
                           9*********************....*****************************999876 PP
Protein Sequence
(Fasta)		MSEDLAKQLA SYKAQLQQVE AALSGNGENE DLLKLKKDLQ EVIELTKDLL STQPSETLTS 60
SDSFASTQPT HSWKVGDKCM AVWSEDGQCY EAEIEEIDEE NGTAAITFAV YGNAEVTPLL 120
NLKPVEEGRK AKEDSGNKPM SKKEMIAQQR EYKKKKALKK AQRIKELEQE REDQKVKWQQ 180
FNNRAYSKNK KGQVKRSIFA SPESVTGKVG VGTCGIADKP MTQYQDTSKY NVRHLMPQ 238
Nucleotide Sequence
(Fasta)		CGAGGACGCC GAGCTGTGTT TGGCAAAAGA TGTCAGAGGA TCTAGCAAAA CAGTTGGCCA 60
GCTACAAAGC TCAACTCCAG CAAGTAGAAG CTGCTCTATC GGGAAATGGA GAAAATGAAG 120
ATCTGCTGAA ACTGAAGAAG GATTTGCAAG AAGTCATAGA ACTGACCAAA GACCTTCTGT 180
CAACTCAGCC TTCGGAAACT CTCACAAGTT CAGACAGCTT TGCTTCTACT CAGCCCACTC 240
ATTCATGGAA AGTAGGGGAC AAGTGCATGG CCGTCTGGAG TGAAGATGGA CAGTGTTATG 300
AGGCGGAGAT CGAGGAGATC GATGAAGAGA ACGGCACCGC TGCGATCACC TTCGCTGTCT 360
ATGGCAATGC CGAAGTGACT CCATTGTTGA ACCTCAAGCC TGTAGAGGAA GGAAGGAAAG 420
CAAAAGAGGA CAGCGGCAAC AAACCCATGT CAAAAAAAGA AATGATTGCC CAGCAGCGTG 480
AATATAAAAA GAAAAAAGCT TTGAAAAAAG CACAGAGAAT AAAAGAGCTT GAGCAGGAGC 540
GAGAGGACCA GAAGGTGAAA TGGCAGCAGT TCAACAACAG GGCGTACTCG AAAAACAAGA 600
AAGGCCAGGT AAAGAGGAGT ATTTTTGCTT CGCCAGAAAG TGTAACGGGC AAAGTCGGAG 660
TAGGAACTTG TGGAATTGCT GACAAGCCCA TGACACAGTA TCAAGATACA TCCAAATACA 720
ATGTCAGGCA TTTGATGCCT CAGTAGTGAG AAACTGTTGG ATTTCATCTC CGCAGGGCTT 780
TACATTTACC TTTTTATCCT TATATTTTTC TAAAGGTAAA TTATTTGTTA GATGAGTAAG 840
GGAGATCCGT TGTTGTCATT GTTTGGCTTT GGTAGGATGA AACTTGAAGA CATTTGATAA 900
CTGCTACCAT GTAACTTTTC ATTGCTACTC ACCACAGCTT CTTCAGTATG TTGAACAAGG 960
CAACTTTTCT AGCTAAGTGC TGCATAAGTC GGCACGTAGA TGACTTAGGA ACGTCAGGCC 1020
ACTTAACTGA TGTTGTGTGG ACAGTTTGTA AGTCCTAACT TGGGATTTTC AGATGCTTTG 1080
CACTTGATAT ATTCCAACAG TGCAGTGGAA GGGACATCAA GGCAAAACGC CAGCCTGCTG 1140
AAGAGAGCGG CTTCCGTTTT ACAACCTGGC ACTGTCCAGA CGAGCCCGAG TATAGGTTAA 1200
TTTATAAATG GCAAAGTTTA TTTTGAGGTT TTTTTCCTTG AATTGTTTCC TGGGACTATT 1260
AGGTCACCTC TACAATTGAC TCACCTTGTA TTTTTTGTCA TTGAGTTTGA ATTTTATATT 1320
AAAAAACCAA ACAAACCA 1339
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mum-0066 ENSMUSP00000025997.5 Mus musculus 100 1e-119 426
WERAM-Tub-0111 ENSTBEP00000012421.1 Tupaia belangeri 99 4e-119 424
WERAM-Orc-0076 ENSOCUP00000007040.2 Oryctolagus cuniculus 99 1e-118 422
WERAM-Hos-0101 ENSP00000358605.1 Homo sapiens 99 1e-118 422
WERAM-Poa-0026 ENSPPYP00000003078.1 Pongo abelii 99 2e-118 422
WERAM-Paa-0147 ENSPANP00000020975.1 Papio anubis 99 2e-118 422
WERAM-Pat-0022 ENSPTRP00000005182.3 Pan troglodytes 99 2e-118 422
WERAM-Ocp-0134 ENSOPRP00000014013.1 Ochotona princeps 99 2e-118 422
WERAM-Nol-0168 ENSNLEP00000018780.1 Nomascus leucogenys 99 2e-118 422
WERAM-Mup-0020 ENSMPUP00000002068.1 Mustela putorius furo 99 2e-118 422
WERAM-Mam-0060 ENSMMUP00000010218.1 Macaca mulatta 99 2e-118 422
WERAM-Gog-0116 ENSGGOP00000009828.2 Gorilla gorilla 99 2e-118 422
WERAM-Chs-0056 ENSCSAP00000001485.1 Chlorocebus sabaeus 99 2e-118 422
WERAM-Caj-0197 ENSCJAP00000034639.1 Callithrix jacchus 99 2e-118 422
WERAM-Aim-0064 ENSAMEP00000005552.1 Ailuropoda melanoleuca 99 2e-118 422
WERAM-Loa-0129 ENSLAFP00000012022.2 Loxodonta africana 98 4e-118 421
WERAM-Mod-0084 ENSMODP00000013212.2 Monodelphis domestica 99 5e-118 420
WERAM-Ict-0061 ENSSTOP00000005452.2 Ictidomys tridecemlineatus 98 6e-118 420
WERAM-Ova-0100 ENSOARP00000010198.1 Ovis aries 98 6e-118 420
WERAM-Otg-0012 ENSOGAP00000000511.2 Otolemur garnettii 98 6e-118 420
WERAM-Bot-0005 ENSBTAP00000000722.2 Bos taurus 98 6e-118 420
WERAM-Soa-0056 ENSSARP00000005482.1 Sorex araneus 98 7e-118 420
WERAM-Sus-0214 ENSSSCP00000026180.1 Sus scrofa 98 7e-118 420
WERAM-Fec-0182 ENSFCAP00000025256.1 Felis catus 98 2e-117 418
WERAM-Dan-0107 ENSDNOP00000012705.2 Dasypus novemcinctus 99 2e-117 418
WERAM-Ora-0017 ENSOANP00000002552.2 Ornithorhynchus anatinus 98 4e-117 417
WERAM-Caf-0119 ENSCAFP00000015780.3 Canis familiaris 99 4e-117 417
WERAM-Myl-0175 ENSMLUP00000014580.1 Myotis lucifugus 97 1e-116 416
WERAM-Cap-0079 ENSCPOP00000005709.2 Cavia porcellus 92 1e-112 402
WERAM-Gaga-0089 ENSGALP00000013929.4 Gallus gallus 95 9e-110 393
WERAM-Tag-0132 ENSTGUP00000010931.1 Taeniopygia guttata 95 1e-109 392
WERAM-Fia-0037 ENSFALP00000002401.1 Ficedula albicollis 95 1e-109 392
WERAM-Anc-0058 ENSACAP00000005857.1 Anolis carolinensis 95 7e-109 390
WERAM-Pes-0113 ENSPSIP00000013643.1 Pelodiscus sinensis 97 5e-108 387
WERAM-Sah-0170 ENSSHAP00000017892.1 Sarcophilus harrisii 98 5e-101 363
WERAM-Vip-0036 ENSVPAP00000003145.1 Vicugna pacos 98 9e-101 363
WERAM-Dio-0058 ENSDORP00000005294.1 Dipodomys ordii 88 2e-99 358
WERAM-Lac-0064 ENSLACP00000008810.1 Latimeria chalumnae 84 1e-96 349
WERAM-Leo-0124 ENSLOCP00000015205.1 Lepisosteus oculatus 84 8e-95 343
WERAM-Anp-0034 ENSAPLP00000003829.1 Anas platyrhynchos 95 1e-93 340
WERAM-Meg-0112 ENSMGAP00000011207.2 Meleagris gallopavo 94 1e-90 330
WERAM-Dar-0116 ENSDARP00000038215.5 Danio rerio 79 5e-89 324
WERAM-Prc-0158 ENSPCAP00000015111.1 Procavia capensis 98 1e-88 322
WERAM-Chh-0026 ENSCHOP00000002599.1 Choloepus hoffmanni 98 4e-88 321
WERAM-Orn-0003 ENSONIP00000000550.1 Oreochromis niloticus 75 7e-88 320
WERAM-Gaa-0098 ENSGACP00000012540.1 Gasterosteus aculeatus 76 1e-87 319
WERAM-Asm-0216 ENSAMXP00000020915.1 Astyanax mexicanus 76 3e-87 318
WERAM-Tar-0084 ENSTRUP00000016366.1 Takifugu rubripes 74 6e-86 314
WERAM-Xim-0155 ENSXMAP00000012780.1 Xiphophorus maculatus 75 8e-86 313
WERAM-Orla-0056 ENSORLP00000007459.1 Oryzias latipes 76 3e-85 311
WERAM-Pof-0213 ENSPFOP00000017186.1 Poecilia formosa 76 3e-85 311
WERAM-Ten-0164 ENSTNIP00000016321.1 Tetraodon nigroviridis 75 3e-85 311
WERAM-Gam-0182 ENSGMOP00000017798.1 Gadus morhua 77 2e-84 309
WERAM-Tut-0090 ENSTTRP00000007470.1 Tursiops truncatus 79 2e-83 305
WERAM-Tas-0066 ENSTSYP00000006045.1 Tarsius syrichta 79 2e-83 305
WERAM-Ere-0065 ENSEEUP00000005400.1 Erinaceus europaeus 79 6e-83 304
WERAM-Pem-0076 ENSPMAP00000008472.1 Petromyzon marinus 68 8e-75 276
WERAM-Ect-0134 ENSETEP00000015345.1 Echinops telfairi 53 2e-49 192
WERAM-Xet-0102 ENSXETP00000033649.2 Xenopus tropicalis 82 2e-48 189
WERAM-Mae-0094 ENSMEUP00000009229.1 Macropus eugenii 58 4e-46 181
WERAM-Drm-0076 FBpp0289146 Drosophila melanogaster 41 8e-25 110
WERAM-Mua-0136 GSMUA_Achr8P34180_001 Musa acuminata 31 1e-12 70.5
WERAM-Lab-0003 EDR15018 Laccaria bicolor 32 1e-12 70.5
WERAM-Pot-0055 POPTR_0004s23810.1 Populus trichocarpa 30 2e-12 69.7
WERAM-Met-0118 KEH32747 Medicago truncatula 29 8e-12 67.8
WERAM-Sol-0019 Solyc01g103020.2.1 Solanum lycopersicum 31 4e-11 65.5
WERAM-Brr-0132 Bra026585.1-P Brassica rapa 29 7e-11 64.7
WERAM-Glm-0215 GLYMA17G00560.1 Glycine max 29 9e-11 64.3
WERAM-Art-0036 AT2G02570.1 Arabidopsis thaliana 29 1e-10 64.3
WERAM-Prp-0076 EMJ24376 Prunus persica 28 1e-10 63.9
WERAM-Sot-0061 PGSC0003DMT400053385 Solanum tuberosum 31 2e-10 63.2
WERAM-Arl-0131 scaffold_500192.1 Arabidopsis lyrata 30 3e-10 62.8
WERAM-Orr-0090 ORUFI08G00760.1 Oryza rufipogon 30 8e-10 61.2
WERAM-Orni-0085 ONIVA08G00730.1 Oryza nivara 30 8e-10 61.2
WERAM-Ori-0093 BGIOSGA027775-PA Oryza indica 30 8e-10 61.2
WERAM-Orgl-0084 OGLUM08G00790.1 Oryza glumaepatula 30 8e-10 61.2
WERAM-Org-0087 ORGLA08G0001000.1 Oryza glaberrima 30 8e-10 61.2
WERAM-Orb-0087 OBART08G00720.1 Oryza barthii 30 8e-10 61.2
WERAM-Lep-0085 LPERR08G00910.1 Leersia perrieri 29 8e-10 61.2
WERAM-Orbr-0094 OB08G10830.1 Oryza brachyantha 29 8e-10 61.2
WERAM-Sob-0098 Sb07g001010.1 Sorghum bicolor 28 3e-09 59.7
WERAM-Zem-0007 GRMZM2G005737_P01 Zea mays 27 3e-09 59.3
WERAM-Mel-0026 EGG10984 Melampsora laricipopulina 30 4e-09 58.9
WERAM-Brd-0073 BRADI3G13410.3 Brachypodium distachyon 28 4e-09 58.9
WERAM-Bro-0128 Bo7g080510.1 Brassica oleracea 28 9e-09 57.8
WERAM-Sei-0072 Si017933m Setaria italica 29 4e-08 55.5
WERAM-Chr-0026 EDP07443 Chlamydomonas reinhardtii 31 6e-07 51.6
WERAM-Orl-0027 KN538777.1_FGP011 Oryza longistaminata 30 7e-07 51.6
WERAM-Ors-0078 OS08T0109900-01 Oryza sativa 30 1e-06 50.8
WERAM-Tra-0312 Traes_7BL_DB71F86C2.1 Triticum aestivum 27 2e-06 49.7
WERAM-Tru-0060 TRIUR3_24898-P1 Triticum urartu 27 4e-06 48.9
WERAM-Put-0003 PTTG_02468P0 Puccinia triticina 30 4e-06 48.9
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 46 5e-06 48.5
Created Date 25-Jun-2016