WERAM Information

Tag Content
WERAM ID WERAM-Scp-0041
Ensembl Protein ID SPCC1281.02c.1:pep
Uniprot Accession O94519; SPF30_SCHPO
Genbank Protein ID NP_588166.1
Protein Name Splicing factor spf30
Genbank Nucleotide ID NM_001023155.2
Gene Name Spf30;SPCC1281.02c
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPCC1281.02c SPCC1281.02c.1 SPCC1281.02c.1:pep
Details
Type Family Domain Substrates AA References (PMIDs)
Me_Reader Tudor Tudor H3R17me2a R 21172665
Status Reviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 5.30e-10 37.5 77 137
Organism Schizosaccharomyces pombe
NCBI Taxa ID 284812
Functional Description
(View)		 Necessary for spliceosome assembly.
Domain Profile
  Me_Reader Tudor
           Tudor.txt   2 skvGlrVvakwssdG..yfYsgkiVvkghrve..sgeeyysikyedqrkwyilsLekgnrlreqyg 63 
                         +++G+ V+a+w   G  +fY+ +i    ++v+   +++ y++++ d+++++++sL++ + + e+++
  SPCC1281.02c.1:pep  77 FTPGNLVMARWV-SGdyLFYPSRI----TAVSgfGANKKYTVQFLDYPDIETVSLKHIKAMPEEKR 137
                         789*********.6667*******....9***999*************************999886 PP
Protein Sequence
(Fasta)		MEKELEEYKS QLALVQISLQ KTPQNEELQL LENDLKELIS LTENLLQESV ENDKNTFQNS 60
QNGVAGFNTS KPVHIDFTPG NLVMARWVSG DYLFYPSRIT AVSGFGANKK YTVQFLDYPD 120
IETVSLKHIK AMPEEKRQEI EGNKEILKKS TTIRSTPVRE PTKAISVASM STSPSNYASR 180
ASSPDMKSSA AVTANVSPIQ NVAQHVSTLP KISPIPPSNP PPVPSVSYSQ KQQKQLKPKA 240
ALEASQNSWK QFAARGVKTG RVGKRKKIGE SSIFKSTEDF PGRTNPKNFG NVARSGHREK 300
HIYNYREDED S 311
Nucleotide Sequence
(Fasta)		CGCCTGCTTC ACATATTATC TACACTTACA ACCGGTTTTG GCGATAAAGC CATTACACTT 60
GGAAATTTTT ACTGTTTGAA AAAAAAATCT ATTAAATCTA TAAAAGTAAT CGTATGGAGA 120
AGGAATTAGA GGAATACAAG AGCCAGCTTG CTCTCGTTCA AATTTCTCTT CAGAAGACTC 180
CCCAAAACGA GGAATTACAG TTACTGGAAA ATGATTTAAA GGAATTAATT AGCCTTACTG 240
AAAACTTACT ACAAGAAAGT GTAGAAAATG ATAAAAATAC GTTTCAAAAT TCCCAAAATG 300
GTGTTGCAGG TTTCAATACT TCAAAGCCAG TACATATCGA CTTTACGCCT GGAAATTTAG 360
TAATGGCCCG ATGGGTTTCA GGAGATTATT TATTTTATCC TTCACGTATT ACTGCTGTTT 420
CAGGCTTCGG TGCAAACAAA AAGTACACAG TACAATTTCT TGACTATCCT GACATTGAAA 480
CTGTTTCCCT CAAACATATT AAGGCCATGC CTGAGGAAAA ACGTCAGGAA ATAGAAGGAA 540
ATAAAGAAAT TCTCAAAAAA TCTACCACTA TACGTAGTAC ACCTGTTAGA GAGCCTACAA 600
AAGCAATATC TGTAGCATCT ATGTCTACAA GTCCTTCCAA TTATGCGTCT CGTGCCTCTT 660
CTCCAGATAT GAAGAGTTCG GCGGCTGTAA CGGCTAACGT ATCTCCGATC CAAAATGTCG 720
CTCAGCATGT TTCAACCCTA CCAAAGATCT CTCCCATTCC TCCCTCTAAC CCTCCACCTG 780
TTCCTAGTGT TTCATACTCC CAAAAGCAGC AAAAACAACT AAAACCTAAA GCAGCACTTG 840
AAGCATCACA AAATTCTTGG AAACAGTTTG CTGCTCGAGG TGTAAAAACT GGACGCGTTG 900
GCAAACGAAA GAAGATTGGA GAATCTAGTA TATTTAAAAG CACTGAAGAT TTTCCTGGAA 960
GGACAAACCC TAAAAATTTT GGAAATGTTG CGAGGTCTGG GCATCGCGAA AAGCACATCT 1020
ATAATTATAG AGAAGACGAA GATAGCTGAG CAATGTGTCT TCATTTGAAA CTTGGTATTT 1080
AATTAATAGG CTTTTAACAG CCGCTGTTTA TGTTTTCATT TATATATTTT TTGGTGCAAT 1140
AAGCATAAAT AAGCTTTTTA CAGATCTTTA ACCTAATTTC TGATGAAGCT GTCCTGGTTT 1200
TCCATATTTA ACAAATTGTT CGTCGCATTG TCTACAGCTA TAAAACAATT CTTTTGTTGT 1260
TGTTGGTGTA TACATTAGAG AGGAATGAGT AATTAGAAAA GAATTATTAC CTTTCGCATC 1320
TTAAGAATTT AACAGCCATA GACTACTTTT TTATATTCAC ATCTGCATAC GGTTTTATGA 1380
ATAGCATCAT TACTATTTTC TGATGCGAAA TAGTCATTTC GTTCTTAAAC AATAGATCCA 1440
TTTCCCGTGA CATTTGCTAA TTGTATTCCA CCAAAATTTG ACTT 1485
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0507--mRNA processing
KW-0508--mRNA splicing
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0747--Spliceosome
--
Interpro

IPR002999--Tudor
PROSITE
Pfam
Gene Ontology

GO:0005634--C:nucleus
GO:0005681--C:spliceosomal complex
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0000244--P:spliceosomal tri-snRNP complex assembly
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Scj-0021 EEB07806 Schizosaccharomyces japonicus 43 3e-21 100
WERAM-Tum-0016 CAZ83345 Tuber melanosporum 38 4e-12 69.3
WERAM-Asn-0007 CADANIAP00000614 Aspergillus nidulans 37 1e-11 67.8
WERAM-Coi-0007 KJF60172 Coccidioides immitis 37 5e-11 65.9
WERAM-Aso-0003 CADAORAP00000561 Aspergillus oryzae 36 8e-11 65.1
WERAM-Asf-0022 CADAFLAP00009993 Aspergillus flavus 36 1e-10 64.3
WERAM-Scs-0010 EDN99432 Sclerotinia sclerotiorum 33 3e-10 63.2
WERAM-Asni-0027 CADANGAP00008951 Aspergillus niger 36 3e-10 63.2
WERAM-Asfu-0005 CADAFUAP00001631 Aspergillus fumigatus 36 4e-10 62.8
WERAM-Asc-0033 CADACLAP00008048 Aspergillus clavatus 35 5e-10 62.8
WERAM-Ast-0024 CADATEAP00007655 Aspergillus terreus 33 7e-10 62.0
WERAM-Nec-0024 EFNCRP00000004556 Neurospora crassa 43 2e-09 60.5
WERAM-Put-0003 PTTG_02468P0 Puccinia triticina 30 1e-08 58.2
WERAM-Chg-0037 EAQ84927 Chaetomium globosum 32 1e-08 57.8
WERAM-Pug-0026 EFP86213 Puccinia graminis 28 3e-08 56.6
WERAM-Mao-0024 MGG_08894T0 Magnaporthe oryzae 45 5e-08 55.8
WERAM-Mel-0026 EGG10984 Melampsora laricipopulina 31 5e-08 55.8
WERAM-Lab-0003 EDR15018 Laccaria bicolor 36 6e-08 55.8
WERAM-Fuo-0018 FOXG_03439P0 Fusarium oxysporum 30 1e-07 54.7
WERAM-Trr-0006 EGR49247 Trichoderma reesei 34 3e-07 53.1
WERAM-Gag-0003 GGTG_01190T0 Gaeumannomyces graminis 46 6e-07 52.4
WERAM-Ved-0028 EGY16270 Verticillium dahliae 36 2e-06 50.8
WERAM-Trv-0025 EHK23652 Trichoderma virens 37 3e-06 50.1
Created Date 25-Jun-2016