Tag |
Content |
WERAM ID |
WERAM-Leo-0077 |
Ensembl Protein ID |
ENSLOCP00000010093.1 |
Gene Name |
hdac12 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
6.50e-24 |
85.2 |
85 |
338 |
|
Organism |
Lepisosteus oculatus |
Domain Profile |
HDAC Class-I
class-1.txt 30 theLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkLnk 118 + +++l+ ++ + +++ p+ s+e l+++h+eey+e + + +++++e+ + + f +g+ + c tG++l aa+ ENSLOCP00000010093.1 85 VLNFLLKDQIITDKQVCIPEPVSQEALCRVHTEEYVENFITGKTSQKEQ---KRTGFV------WSKGIVHRCLYETGGTLLAAEI--A 162 5566666777778899999999*************98664443333332...223443......346788889999****998874..4 PP class-1.txt 119 keadiainwaGGlhhakkseasGfcyvnDivlailellk.kh..krvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdl 204 ++ +a aGG hha+ s +G+c +nD+ +a + + +h +++l +d+d+h GDg f+ v+t s+h ++ fP + ENSLOCP00000010093.1 163 LQRGLASSTAGGTHHAFPSFGAGYCLLNDLAVAAKQWMDsSHpkRKILIVDLDVHQGDGTAYIFRDEPGVFTFSVHCGKN--FPVQKQQ 249 56789999**********************9999887764562257******************************9888..9965433 PP class-1.txt 205 sdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae....cvkfvksfnlpll 289 s +++ +++g+ D+ y + +++ + v+e f+P++v+ + G D +D lg+ l+ +g+ + +++ v + +p+ ENSLOCP00000010093.1 250 S----------DLDISIDEGMMDKDYLNTVETHLPWVLESFRPDVVLYDAGVDPHREDELGKLGLTDEGLYQrdmyVIDAVVRRGIPIA 328 3..........3789999***************************************************876555689999999***** PP class-1.txt 290 vlGGGGYtlrn 300 + GGGY+ ENSLOCP00000010093.1 329 TVIGGGYSR-D 338 *******74.4 PP
|
Protein Sequence (Fasta) | MIPVCISATQ NAYYKQLFRS KHVTVFGDLL LRRRIVQHNF KWKRATHSKY EIEEGARGLP 60 VVHHSKYVCD LPPNHRFPMR KFPKVLNFLL KDQIITDKQV CIPEPVSQEA LCRVHTEEYV 120 ENFITGKTSQ KEQKRTGFVW SKGIVHRCLY ETGGTLLAAE IALQRGLASS TAGGTHHAFP 180 SFGAGYCLLN DLAVAAKQWM DSSHPKRKIL IVDLDVHQGD GTAYIFRDEP GVFTFSVHCG 240 KNFPVQKQQS DLDISIDEGM MDKDYLNTVE THLPWVLESF RPDVVLYDAG VDPHREDELG 300 KLGLTDEGLY QRDMYVIDAV VRRGIPIATV IGGGYSRDID RLALRHTIVH RAAVKVWETR 360 GL 362Protein Fasta Sequence
>ENSLOCP00000010093.1|Class-I|Lepisosteus oculatus MIPVCISATQNAYYKQLFRSKHVTVFGDLLLRRRIVQHNFKWKRATHSKYEIEEGARGLPVVHHSKYVCDLPPNHRFPMRKFPKVLNFLLKDQIITDKQVCIPEPVSQEALCRVHTEEYVENFITGKTSQKEQKRTGFVWSKGIVHRCLYETGGTLLAAEIALQRGLASSTAGGTHHAFPSFGAGYCLLNDLAVAAKQWMDSSHPKRKILIVDLDVHQGDGTAYIFRDEPGVFTFSVHCGKNFPVQKQQSDLDISIDEGMMDKDYLNTVETHLPWVLESFRPDVVLYDAGVDPHREDELGKLGLTDEGLYQRDMYVIDAVVRRGIPIATVIGGGYSRDIDRLALRHTIVHRAAVKVWETRGL
|
Nucleotide Sequence (Fasta) | TTATAAACCA CACACTAAGA AATATTGGGG TATTTCACTT TAAAATATCA AATATCCACT 60 ACACAATGCT GATTGAAAAG ACGCAGTATA CTACGTTAAA ATAATTACTA CAATACACGT 120 GGTAAAATAA CCTACACGCT GCCAGCGTTT CACCAGAAAC ATACAGTACG AAGGAAACGT 180 CAGCGTCTGA ATTTTAGTTC CTACTGTACC TCCCAACCTT TAAGGGAAAC ATGGCGTCTA 240 GATGTTACAA AGTATAGCAT TTCCTTAAAA TTGGATTTAG TGATTTCTAG TATTACAAGG 300 CAACTAATTT GGAAAGTCGG AAAAGTCACT GCTACCGGTG CATTTAAAAT ACGTGTTGTT 360 ATAACTGATA CAGTATTTCT GATCGGGATG GTTTCGTAAT AAGGCATAGT AACATAAACA 420 CAAACAAAAA TGATACCTGT ATGTATATCG GCTACACAAA ACGCATATTA TAAACAGCTT 480 TTTCGTTCTA AGCATGTGAC AGTCTTTGGG GATCTCCTTT TGCGCAGAAG AATTGTCCAG 540 CATAACTTCA AGTGGAAGAG AGCCACACAT AGCAAATACG AAATTGAAGA AGGAGCAAGA 600 GGTCTTCCTG TTGTCCATCA CAGTAAATAT GTTTGTGATC TTCCACCCAA TCACAGATTT 660 CCAATGAGAA AATTTCCCAA GGTCCTGAAC TTTCTTCTTA AAGATCAAAT AATAACAGAT 720 AAACAGGTGT GCATCCCCGA ACCGGTGTCT CAAGAGGCTC TCTGCCGTGT GCACACAGAG 780 GAGTATGTGG AAAACTTCAT AACTGGGAAG ACCAGCCAGA AGGAACAGAA AAGGACTGGA 840 TTTGTCTGGA GTAAAGGCAT AGTACATCGC TGCTTATATG AAACAGGTGG CACACTACTC 900 GCGGCCGAGA TTGCACTCCA AAGAGGACTG GCCAGCAGCA CGGCGGGGGG CACTCACCAT 960 GCCTTCCCCA GCTTTGGTGC AGGATACTGT CTCCTCAATG ACCTGGCGGT AGCGGCCAAG 1020 CAGTGGATGG ACAGCTCTCA CCCCAAGAGG AAGATCCTCA TCGTTGACCT GGATGTGCAC 1080 CAGGGAGATG GCACTGCTTA TATCTTCAGA GATGAGCCAG GTGTTTTCAC TTTTTCTGTG 1140 CATTGTGGGA AGAACTTTCC GGTTCAGAAA CAACAGAGTG ACCTGGATAT TAGCATTGAC 1200 GAAGGAATGA TGGATAAAGA TTACCTCAAT ACAGTCGAGA CACATCTCCC CTGGGTGCTG 1260 GAGAGTTTTC GTCCCGATGT GGTGCTCTAC GATGCTGGTG TTGACCCCCA CAGAGAGGAT 1320 GAATTGGGGA AACTTGGCTT AACAGATGAG GGACTGTATC AGAGGGACAT GTATGTTATT 1380 GATGCTGTTG TAAGGAGGGG CATTCCCATT GCCACAGTTA TTGGTGGAGG TTATTCCAGA 1440 GACATTGATA GACTGGCTCT CAGACATACT ATAGTCCACA GAGCTGCTGT AAAGGTGTGG 1500 GAAACCAGGG GGTTGTGACT ACAATGTGTG ATCATTCCAG TTGTTCCACA GAAAAAGATG 1560 TATAATGTCT GCCTACTTGA AGACCTTTTA TATTTTTCTT ATTCTGGATG AAAACATTTT 1620 TGTATTTGCA TTGAAGTTTT GTAAAAGATG AGGAAACACT GACAAACATA CTAATGTACA 1680 TGGACAATTA AGTTAGAAAA CATCAGTATG TTCTATGAGA CAAATTGCTG ATACTCAAAA 1740 GTTGCATTAT TAATGCATGC AATAAGTGCA TTTTATTTTA CAAGACAAAT ATACGATTAT 1800 TTTAAATTAA ATTCAGTTAA TTTTATGGAA ACCATGTCAT TATTATGCCT TTTTACTGTT 1860 AAGAAGTGTT TCTGTGCTGT CAAGAGACAT GTTGTGAATT CTCTTCTATA ATTTTCACAT 1920 AGGGGTCATA TTATTAAGGG TAATTATGCA TGTTGCTTTT TTCTTCAACT TGAATGTTTA 1980 CATACTGTTA TAAACGGGGG GTTATGAACA TTGAGAAAGA ACATCAGGAA ATGACCGAGC 2040 GGATTAATCA AAAAGTAAAT TAAATAATCA TAACTCCCAA CTTGTACTGT AAATGATTTC 2100 TGCCAAGAAT ATACCTAAGA ATACCACATT AATTATTTGT TCTCTGGCAC AGTTTTTGTG 2160 AAAAGAGCAA TAATTCAGGG ACACCCGATT AAGCAAATAT TAACAATGAC ATACAGAAGT 2220 TTACAGACAA GGTGTCTCAG AGGCCTAACA TCCTAACCAC ACAGAAAATC CCAGTCTCTT 2280 ACCCAGTATG CAATTCTTAA AGCCTACAAA GATCAGAATA AGAGATAAGC TGCTTTCTAA 2340 ACTAAATAGA ATACAACCTG TGGTTAAATC TCTCTATCAG CAAACCTGAA TGACACAGAA 2400 TAAATGGGAA TCTCCCTATA TCCCTATTCT AAAATGCACT CACTAAGCAG GAGGGCCTGT 2460 TTCTTAACTC AGGAACTCCA AGTTCCCTAA AAAAACTACA GAATAGCAAG CTTTCTTAAG 2520 ACCTCTTGCC TGGCACAGGC TTTATGTTTT GTATCCTATC ACGTGGTCTC TGTTCTTTTT 2580 CTCTGTTCTG TCTTGATCTG ATCTTATACG GTGTCTTTCT GGACTGTTGA TTGACACTTA 2640 ATCATTTACC CAGAACTTAA TTAACTAAGC CTAATTACTA AGGTAAACCA AGGTAGACTT 2700 TATGATTGCT TTTTTGACCA CTGAGTCTGG ACTCCCTACA TCTTAGAAAA CATTGCCTTT 2760 GCTTTGAAGC TGAAAATGTT GACACTATCT AGACATCATC CATTTTTTCT TTTGAGATAT 2820 ATCCATAGTT ATCTACAGAT GTAACATTCT GGTCTGCTTT GGAGTGTCTG TAGTAGGTTA 2880 AAGTGAATAT CCTTTTTTAT GTTTCTATGA AAAACTTGTT TTTATATATA AAATGCTTAT 2940 TTTAAAGTTG TGTTAATATC AGAACTACTG CAGCAGTAGT TTTGTAATGA AGATTAAGTC 3000 TACCTCACAG TCAAAATAGG TGCACAATAC TGGATGACCC TTGCAACTTG ATTAATATCA 3060 TTTTAAAATA AATGTTACAT TTCCATCACT GTTGCTTACA CATTTAATTT GTATTTTTTT 3120 ATATTTTCAT TCCTTAATTG TATGTATATA GATTTGACCA TGTTAAGCAT AGGTTGTGAA 3180 CCTAATTGAA CTACTGAAAT TGCTAAGTCT ATTTAACAAT AGTTACGAAA CGCTTTCTGT 3240 AAAGCAAATA GCCCGAACAT AATCAACGCT AATACCATAC ATGTTATGCC TTAGTAACAA 3300 CCTTCATACA CCATGTTCAA TAAAGGAGAT TGCTAAACCT ATTATTATTA TT
3353Nucleotide Fasta Sequence
>ENSLOCP00000010093.1|Class-I|Lepisosteus oculatus TTATAAACCACACACTAAGAAATATTGGGGTATTTCACTTTAAAATATCAAATATCCACTACACAATGCTGATTGAAAAGACGCAGTATACTACGTTAAAATAATTACTACAATACACGTGGTAAAATAACCTACACGCTGCCAGCGTTTCACCAGAAACATACAGTACGAAGGAAACGTCAGCGTCTGAATTTTAGTTCCTACTGTACCTCCCAACCTTTAAGGGAAACATGGCGTCTAGATGTTACAAAGTATAGCATTTCCTTAAAATTGGATTTAGTGATTTCTAGTATTACAAGGCAACTAATTTGGAAAGTCGGAAAAGTCACTGCTACCGGTGCATTTAAAATACGTGTTGTTATAACTGATACAGTATTTCTGATCGGGATGGTTTCGTAATAAGGCATAGTAACATAAACACAAACAAAAATGATACCTGTATGTATATCGGCTACACAAAACGCATATTATAAACAGCTTTTTCGTTCTAAGCATGTGACAGTCTTTGGGGATCTCCTTTTGCGCAGAAGAATTGTCCAGCATAACTTCAAGTGGAAGAGAGCCACACATAGCAAATACGAAATTGAAGAAGGAGCAAGAGGTCTTCCTGTTGTCCATCACAGTAAATATGTTTGTGATCTTCCACCCAATCACAGATTTCCAATGAGAAAATTTCCCAAGGTCCTGAACTTTCTTCTTAAAGATCAAATAATAACAGATAAACAGGTGTGCATCCCCGAACCGGTGTCTCAAGAGGCTCTCTGCCGTGTGCACACAGAGGAGTATGTGGAAAACTTCATAACTGGGAAGACCAGCCAGAAGGAACAGAAAAGGACTGGATTTGTCTGGAGTAAAGGCATAGTACATCGCTGCTTATATGAAACAGGTGGCACACTACTCGCGGCCGAGATTGCACTCCAAAGAGGACTGGCCAGCAGCACGGCGGGGGGCACTCACCATGCCTTCCCCAGCTTTGGTGCAGGATACTGTCTCCTCAATGACCTGGCGGTAGCGGCCAAGCAGTGGATGGACAGCTCTCACCCCAAGAGGAAGATCCTCATCGTTGACCTGGATGTGCACCAGGGAGATGGCACTGCTTATATCTTCAGAGATGAGCCAGGTGTTTTCACTTTTTCTGTGCATTGTGGGAAGAACTTTCCGGTTCAGAAACAACAGAGTGACCTGGATATTAGCATTGACGAAGGAATGATGGATAAAGATTACCTCAATACAGTCGAGACACATCTCCCCTGGGTGCTGGAGAGTTTTCGTCCCGATGTGGTGCTCTACGATGCTGGTGTTGACCCCCACAGAGAGGATGAATTGGGGAAACTTGGCTTAACAGATGAGGGACTGTATCAGAGGGACATGTATGTTATTGATGCTGTTGTAAGGAGGGGCATTCCCATTGCCACAGTTATTGGTGGAGGTTATTCCAGAGACATTGATAGACTGGCTCTCAGACATACTATAGTCCACAGAGCTGCTGTAAAGGTGTGGGAAACCAGGGGGTTGTGACTACAATGTGTGATCATTCCAGTTGTTCCACAGAAAAAGATGTATAATGTCTGCCTACTTGAAGACCTTTTATATTTTTCTTATTCTGGATGAAAACATTTTTGTATTTGCATTGAAGTTTTGTAAAAGATGAGGAAACACTGACAAACATACTAATGTACATGGACAATTAAGTTAGAAAACATCAGTATGTTCTATGAGACAAATTGCTGATACTCAAAAGTTGCATTATTAATGCATGCAATAAGTGCATTTTATTTTACAAGACAAATATACGATTATTTTAAATTAAATTCAGTTAATTTTATGGAAACCATGTCATTATTATGCCTTTTTACTGTTAAGAAGTGTTTCTGTGCTGTCAAGAGACATGTTGTGAATTCTCTTCTATAATTTTCACATAGGGGTCATATTATTAAGGGTAATTATGCATGTTGCTTTTTTCTTCAACTTGAATGTTTACATACTGTTATAAACGGGGGGTTATGAACATTGAGAAAGAACATCAGGAAATGACCGAGCGGATTAATCAAAAAGTAAATTAAATAATCATAACTCCCAACTTGTACTGTAAATGATTTCTGCCAAGAATATACCTAAGAATACCACATTAATTATTTGTTCTCTGGCACAGTTTTTGTGAAAAGAGCAATAATTCAGGGACACCCGATTAAGCAAATATTAACAATGACATACAGAAGTTTACAGACAAGGTGTCTCAGAGGCCTAACATCCTAACCACACAGAAAATCCCAGTCTCTTACCCAGTATGCAATTCTTAAAGCCTACAAAGATCAGAATAAGAGATAAGCTGCTTTCTAAACTAAATAGAATACAACCTGTGGTTAAATCTCTCTATCAGCAAACCTGAATGACACAGAATAAATGGGAATCTCCCTATATCCCTATTCTAAAATGCACTCACTAAGCAGGAGGGCCTGTTTCTTAACTCAGGAACTCCAAGTTCCCTAAAAAAACTACAGAATAGCAAGCTTTCTTAAGACCTCTTGCCTGGCACAGGCTTTATGTTTTGTATCCTATCACGTGGTCTCTGTTCTTTTTCTCTGTTCTGTCTTGATCTGATCTTATACGGTGTCTTTCTGGACTGTTGATTGACACTTAATCATTTACCCAGAACTTAATTAACTAAGCCTAATTACTAAGGTAAACCAAGGTAGACTTTATGATTGCTTTTTTGACCACTGAGTCTGGACTCCCTACATCTTAGAAAACATTGCCTTTGCTTTGAAGCTGAAAATGTTGACACTATCTAGACATCATCCATTTTTTCTTTTGAGATATATCCATAGTTATCTACAGATGTAACATTCTGGTCTGCTTTGGAGTGTCTGTAGTAGGTTAAAGTGAATATCCTTTTTTATGTTTCTATGAAAAACTTGTTTTTATATATAAAATGCTTATTTTAAAGTTGTGTTAATATCAGAACTACTGCAGCAGTAGTTTTGTAATGAAGATTAAGTCTACCTCACAGTCAAAATAGGTGCACAATACTGGATGACCCTTGCAACTTGATTAATATCATTTTAAAATAAATGTTACATTTCCATCACTGTTGCTTACACATTTAATTTGTATTTTTTTATATTTTCATTCCTTAATTGTATGTATATAGATTTGACCATGTTAAGCATAGGTTGTGAACCTAATTGAACTACTGAAATTGCTAAGTCTATTTAACAATAGTTACGAAACGCTTTCTGTAAAGCAAATAGCCCGAACATAATCAACGCTAATACCATACATGTTATGCCTTAGTAACAACCTTCATACACCATGTTCAATAAAGGAGATTGCTAAACCTATTATTATTATT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |