WERAM Information

Tag Content
WERAM ID WERAM-Leo-0040
Ensembl Protein ID ENSLOCP00000005995.1
Gene Name prdm1b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLOCG00000004978.1 ENSLOCT00000006003.1 ENSLOCP00000005995.1
ENSLOCG00000004978.1 ENSLOCT00000006027.1 ENSLOCP00000006019.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 1.80e-36 125 51 160
Organism Lepisosteus oculatus
Domain Profile
  HMT RIZ
               RIZ.txt   7 essipkeglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLaalqi 95 
                           ++  ++e +gv++k++i++g++fGP+ Ge++++++v + an+k++w+i+   g  +++vD+ d +ksnW+ryvn A+s ++qNL+a+q+
  ENSLOCP00000005995.1  51 KYGRDNEVIGVFSKEYIPQGTRFGPLLGEVYTKDDVPKHANRKYFWRIY-TGGHLQHFVDGYDLQKSNWMRYVNPAHSLHDQNLVACQN 138
                           56667788*****************************************.67888888******************************* PP
               RIZ.txt  96 neqifYktikdIepdeELLvwy 117
                           +++++++tik+++p  ELLvwy
  ENSLOCP00000005995.1 139 GKDVYFYTIKPVPPHSELLVWY 160
                           ********************** PP
Protein Sequence
(Fasta)		MKMKGEIGDM NLWREADFAL NCTYIVNDQP SDQSTGIPRA ITSIPRNLTF KYGRDNEVIG 60
VFSKEYIPQG TRFGPLLGEV YTKDDVPKHA NRKYFWRIYT GGHLQHFVDG YDLQKSNWMR 120
YVNPAHSLHD QNLVACQNGK DVYFYTIKPV PPHSELLVWY SREFADRLHY PSPGDLLFSK 180
HAIKQNPNQN KSLKKEMLYS KFILGMNERA RSVCKLQKNK STVISCRKVK KVTKHSFSFE 240
ALSRPKEAFT GLRNYTSETP FIVCKMYSFQ LPLEQHFVCK KLYESHAKKD TYAPAEPSYS 300
PSHSLHGDTQ DQRAEVPRKP MGPYCCSTDT PTSSQKEIPL HLHGLYTHRE GLVSYPTYPP 360
TRHLQQPCLY PYSSHYPRFV LPQYPPPFPS VLSRVPSAYS GYLSSDGLPY PLVSQPSLLP 420
VSIPFQAQAG KEGLIVPSPP TAFSLTSPGA GGLKERPPNN SPPSGAPATP EHSPLPKLSS 480
PRTSEREEAI NLSTPKNSQA TTVLGYKSLP YPLKKQNGKI KYECNVCLKT FGQLSNLKVH 540
LRVHSGERPF QCMVCKKSFT QLAHLQKHNL VHTGEKPHEC QVCQKRFSST SNLKTHLRLH 600
SGEKPYQCKL CSTKFTQYIH LKLHKRLHSR EHPYKCHLCS RAFVHQFTLH IHTRGYCPSV 660
AMAGQSMEEL SRMNELIDKF DMSADADTLE ERASLAEVDA VVQKWIIKNM EKKEGKEDQV 720
EVCFLKKESL HAASFQERDT VVHMYRPPAH LPLTVKQELQ
Nucleotide Sequence
(Fasta)		GGGAAAGTAA GTAAGGTCTC AGACGGATCT CGGGAGCGTC TGAGCCCCTC TTTGGGAAGG 60
TTTCCGGAAT TACCTGCCGA GCTTTTGACC TGGTCTATTT TATTGACCAC TCTTCCTCAC 120
GTCCTAATCT AGGTCAGTCT GCTGGGAGGG TTAAGTTCAA GGCAGGAGAA GACTGACGCC 180
AGACTGCTCG TTAAATAAAT CAGCCTATGA GTGTTGTTTT TGTGTGTGTG TGTGTATGTG 240
TGTGTGTGTG TTACCCAGGC AGACTGCAAA TCCTTCCATC TGGAACAGCA TTTTTTTTTT 300
CAGAGATTGC AGTGCATATG TGTCTGTAGA TCTTATTTTA ACCCCCCCAG TGGGTGTCAA 360
ACAGTTCTCC TTCTGTAATC CCTGTCACAT GACACCAGTG GAAACCAATG AGGCTGGAGC 420
ATGTGCTCAA AAGCCTGGCA GGGCCTGGCT TGGGATCTAT TTTGAGACGA AGGTTTGATC 480
GGGGTAGCTT TTGGGGGAGC GTGGCATATG GATATCTGAC GAAGGAAGAG GGGAAAAGGA 540
AAAGTAGGGG AGAGAGAAAG AGAAGAAGCT GCAACGTGGA TGGGTTTTGC TTGGGAGAGA 600
AGAGGGATGG TTGAACTCAA GGGATAAACT GAAAGCAGCT CAATGACCAC CTAAGAGTTA 660
ATGAGCTTTC AGCTGAGCGG AAGCTATAAA AAAAAACAAA ACTGGGAACC AAAAAACAAA 720
ACAACAAAGC ACAAAACAAC CACAGAGACT TCGGCTGAAA TGAAAATGAA AGGAGAAATC 780
GGGGACATGA ACCTGTGGAG GGAGGCCGAC TTTGCCTTGA ACTGCACCTA CATTGTCAAC 840
GACCAGCCTA GTGACCAGAG CACAGGCATT CCCAGAGCCA TAACGTCCAT ACCACGAAAC 900
CTCACATTCA AGTATGGGCG AGACAATGAG GTGATAGGAG TCTTCAGCAA AGAGTACATC 960
CCCCAAGGAA CACGATTCGG CCCACTGCTT GGGGAAGTCT ACACCAAAGA TGACGTTCCA 1020
AAGCATGCCA ACAGAAAGTA CTTTTGGAGA ATCTACACAG GTGGGCACCT GCAACATTTT 1080
GTCGACGGGT ACGATTTGCA GAAAAGCAAC TGGATGCGCT ATGTCAACCC GGCACACTCC 1140
CTGCACGATC AGAACCTAGT GGCCTGCCAG AATGGCAAGG ACGTCTACTT CTACACCATC 1200
AAGCCTGTGC CGCCACACAG CGAGCTGCTG GTGTGGTACA GCCGTGAGTT TGCTGACCGC 1260
CTGCACTACC CCTCTCCTGG AGACCTCCTC TTCTCCAAAC ATGCAATAAA ACAAAATCCA 1320
AATCAAAACA AAAGTCTGAA AAAAGAAATG CTATACAGCA AGTTCATTTT AGGTATGAAT 1380
GAGAGAGCTA GATCAGTGTG CAAGTTGCAA AAGAACAAGA GTACAGTAAT TTCATGCAGA 1440
AAAGTGAAAA AAGTGACAAA GCATAGCTTC AGCTTTGAAG CCCTCTCCAG ACCTAAAGAA 1500
GCCTTTACAG GTCTGAGAAA CTACACCTCA GAAACTCCAT TTATAGTGTG TAAAATGTAC 1560
TCCTTTCAGC TACCATTGGA ACAACACTTT GTATGCAAGA AGCTTTATGA GTCACATGCC 1620
AAAAAGGACA CATATGCCCC AGCAGAGCCT AGCTACTCCC CTTCACATTC TTTGCATGGA 1680
GACACCCAGG ACCAAAGAGC AGAAGTGCCC AGAAAGCCAA TGGGTCCTTA TTGTTGCTCC 1740
ACAGACACGC CTACCTCAAG TCAGAAAGAA ATCCCCTTGC ATCTTCATGG TCTCTACACC 1800
CACAGAGAGG GTCTGGTGTC CTACCCTACA TATCCCCCAA CCAGACACCT CCAGCAGCCT 1860
TGCCTCTACC CTTACAGCTC ACATTACCCC CGCTTTGTGC TACCTCAATA TCCACCCCCG 1920
TTCCCCAGTG TCTTGTCCAG GGTGCCCTCA GCCTACAGTG GTTACCTGAG CAGCGATGGG 1980
CTACCTTACC CCCTGGTGTC ACAGCCCAGC CTGCTACCTG TGTCCATACC CTTCCAGGCT 2040
CAGGCAGGCA AAGAAGGCCT GATCGTCCCC AGTCCCCCCA CTGCCTTCTC CCTCACCTCT 2100
CCTGGTGCTG GTGGACTGAA GGAGAGACCC CCCAACAATT CCCCACCCAG CGGAGCCCCA 2160
GCTACTCCTG AGCACTCACC ATTGCCCAAG CTGTCTTCAC CAAGGACAAG CGAGCGGGAA 2220
GAGGCCATCA ACCTTAGCAC GCCAAAGAAT AGTCAAGCCA CCACAGTCCT GGGATACAAG 2280
TCTCTGCCCT ACCCCCTGAA GAAGCAGAAT GGCAAGATCA AGTATGAGTG CAATGTGTGC 2340
CTGAAGACCT TTGGGCAGCT CTCCAACCTA AAGGTACACT TGCGGGTTCA CAGCGGAGAG 2400
CGGCCCTTCC AGTGTATGGT GTGTAAAAAG AGCTTCACCC AACTGGCACA CCTACAGAAA 2460
CACAACCTGG TCCACACTGG AGAGAAACCA CATGAGTGTC AGGTGTGCCA AAAACGTTTC 2520
AGCAGCACAA GCAACTTGAA GACGCATTTG CGCCTCCACT CGGGAGAGAA ACCTTATCAG 2580
TGCAAGCTGT GCTCCACCAA GTTCACTCAA TACATCCACC TCAAGCTGCA CAAGCGCCTG 2640
CATAGCCGTG AGCACCCTTA CAAGTGCCAC CTGTGCTCTA GAGCCTTTGT CCACCAGTTC 2700
ACCCTGCACA TACACACCAG GGGCTACTGC CCTTCAGTGG CTATGGCCGG GCAGTCCATG 2760
GAGGAGCTGA GCCGCATGAA CGAGCTCATC GACAAGTTTG ACATGAGTGC CGACGCCGAT 2820
ACCCTAGAGG AGCGGGCCAG CTTGGCAGAG GTGGATGCAG TGGTACAGAA GTGGATCATC 2880
AAGAACATGG AGAAGAAGGA GGGCAAGGAG GACCAGGTCG AGGTCTGCTT CCTTAAGAAA 2940
GAGAGCCTAC ACGCTGCTTC TTTTCAGGAG AGGGACACCG TCGTTCACAT GTACCGGCCC 3000
CCAGCACACC TACCCCTCAC TGTCAAGCAA GAGCTTCAGT AGATTCTTTG GTTGAATGGA 3060
CAGGGGTGTG AACTTAACCC AAGTGAAAAC AAAGCCCCTG TTAAATCATC AGCAGTGAAA 3120
TGCAAATAAT GGGAATCGCC AAAAACCTTT TAAGGAATGC CAACAAACCA AACAACTGCT 3180
TCCCAAAGAC AGCCCCAGAA AAATCACTGT AATTGCACTT GTGCTATGAA CAATCGTCTC 3240
AGTTCTTCTT TACCAGCTCG CAAAAGAGAA ACCTTTTTAA ACCTTTCCCA AAAGAACTGA 3300
CTTTCCTTTG TTTTGTATAT GTGCATGTGT GTTCTAATTT ATTGAGAAAA CATGTTTTGT 3360
AATATATTTT AAAACCTGTA TTTTATTTAA GTTTGTTTGT GCGTGTACGT CTTTACCTGT 3420
AGTAGCATTA GTTTAATTTA AACTGATGTA CCTGTGACAT ACTGGGTCTT CTTAAATTAG 3480
AGCTAGCATT AATAAAAGCA CATCTCTTCG GCTTGAAAGG CTATATGTAA TAGAAATGAT 3540
TAATGAAATG CTTACAGTTT ATTTAAGGTA GCAAGGCAGG AATAAACTCT CAATTCCTCA 3600
TTAAGATGGG TTTTGGTATG GTTGCACAAC CGTCATGCAG TAAGACAACA ATGCATACTT 3660
TATTAATTTA TCAGATCAGG GTTTTCCAGA TTATGTCCCT ATTTATGAAG ATGAAATTAG 3720
TGGTAAGCAT ATATTTAAAA CACTTCCCTA ATGTTCCAAT GTTCTTTCCT AGTTGTACAA 3780
AGAGTGCAAA TCATTTTGAC TGCAAGCAGT TTTAGGTTTT CTTTGTTCCC TCCAAGGAAT 3840
AAACAACACT TTGTATTCTT TGTACTTTTT CTTCAATTTA AAAAAGAGGA AGATTGTTTT 3900
AGGTTGGTAG GGGAAATTCA GCTCACCGAG TCTGATGTTC CCATTTTATG TTATGTTGGT 3960
GTTGTTTCTT TTCTTTTTTT GATATTTTTG ATAAACAGAT AACAAAGGCT TTATAAAACA 4020
AGGATGTTGG AACTGCATGT GTAAAATGAT TGTACCACAT AAGCCAAAAA AAAGTAGAAT 4080
ATTTTTTAAG AGAACAAATA CAAGGTGAGA TGATAGTTCT AAATCTTGAT AGTTAATCAA 4140
GATTGTCTTT GGGCCCCAGC ATTAAAAAAA CCCATACTAA GCCTTTAGAT TATCCTAGAT 4200
AGCATGTACC TGATAGACAA CTTTCACAAA GACCAAAAAT AAAATGTACA GCAATTAAAT 4260
AATACTGAGG TTGGAAATTC AACTTACATA ACTCTAGTTA TGTTTTTATC CAATCAAGAA 4320
AGAAAACTGT TTCTGCCTGT AGCACTTTTA GATAATGTTT TTATTGACAC AAACTTTGTG 4380
AGCAAAGGGA CATATTTTTA ATAATGAGCA AAACCACCAG CAATGCACAG CAAGCATCAT 4440
GTTAATTCTA TGCCTCATTG TAAGGAATTC CCACAACAGT CACAGACGCA AATGAAAGTA 4500
TTGTAGTTCA GGATATTTCA TACCAGGCAT GATGCGCCAA GTTGTTGCTA AATCCACAGA 4560
AAAAGACTAG CAAACTTCCC TTTAAATAAT GTTTTGCACT GTTTTGCGAA ATTAGCTTTA 4620
AGCATATAAA CATACAATGT TTTGAATTGT GTCAGAACTT ACAGTAGATG TGCAAACCAA 4680
AGTACTTAAA AAAAAAAATT AAAACATAAA ATTGATTTGC GGTATTTATG GTATGTAGGC 4740
ACATCTTCTT AATCACTTTT TTTACTGTAA TATGTATTTT ATCAGCAGAG TCTCTTAGAC 4800
CATGCTGGTG GTCAGTCTGT TTGGTTAATC GGTGGATGAC TCATGACTGA CTGTCAAAAC 4860
GTACATATCT GTTGTGAAAG CCATAACCTA GCAAAGTTAG AATTCCGGTT GAGTCTTACT 4920
ATTGACTTTA ACCACTTGTT GCTGAATCAG TAAATTAGTA CATTAACATG GGCTGATGAT 4980
TTCAGCAAAA TCATGTGGAT AGGCAAGCAC TTACAAATAG CTCATTTTTT CTCAGGGCTA 5040
ATCATTCTTT TTATAAATTA AAAAGAAAAC CAGACAATAT CTCAGGAACT TTTTTATACC 5100
ACACTCAGGA TAATGGAATT ATCAATAAAT ATATTTCTAT TTACACCACT TTATCCTTTG 5160
GCTTTAAAAT CAGTATTCCC AAAGCTCCGA ACAAATCAAC TTTAAGAATA GGTCTGTGTG 5220
TTGCTTTGCT TTATATGTGA ATAAACACCA AAGCATCTGT TACTGATAAA TAAAAAGGTT 5280
TAGACTTTTG GTTGCTGTTA GTTTTGTACA GGTTGTCTCT GTTTAGATAT TTTGTCTATG 5340
TTTACAAGCT GTTTACACTT TATATGTGAA AGATTTATTT TGACTAAATT TTTTATAATG 5400
TATGTAGCAC ATACAATAAA CAGTCTTATG TTTATACAAA TGTGTGAGCT TTTTTTCCTA 5460
GCGTCCTTGT GTGTCATTTT AAGCGAACAA TAAAGCCATA TCCTCCTAAG CTCTCAAACT 5520
GATACTAGTT ACTTCTAGAT ACTAGAATAA TAGTGTAAAT GAGACAAACT ACTGCAAAGT 5580
CTAGACTCAA AGCAAAATCA GTCCATACAG AATAAAACTG CCTTGTTAAT TATATCTGTT 5640
GAAATCCAAG ATAGTAATTC CTAAGAACCT AACCAAGGGC TCAATGCATT AACGTTAGTG 5700
CTACCAGCAA TGTGCAGATT AACTTGCTAA TATCATCAAA CAGAGGATAA ACCACATATT 5760
GCCAAATATA CAGTAAACAC AAGTACTGAT GGTAAAGGGC TTGAAATATT 5811
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Tar-0068 ENSTRUP00000013557.1 Takifugu rubripes 51 0.0 663
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 53 0.0 634
WERAM-Gaa-0023 ENSGACP00000003553.1 Gasterosteus aculeatus 52 1e-180 630
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 47 2e-177 620
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 46 6e-177 618
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 47 1e-175 613
WERAM-Loa-0122 ENSLAFP00000011245.2 Loxodonta africana 45 2e-175 613
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 47 2e-175 613
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 46 3e-175 612
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 46 7e-175 611
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 46 1e-174 610
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 46 1e-174 610
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 47 2e-174 610
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 46 3e-174 609
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 46 6e-174 608
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 46 7e-174 608
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 47 2e-173 606
WERAM-Orn-0164 ENSONIP00000017081.1 Oreochromis niloticus 50 3e-173 606
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 47 3e-173 606
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 46 6e-173 605
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 47 7e-173 605
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 46 8e-173 604
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 47 8e-173 604
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 47 2e-172 603
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 45 2e-172 603
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 46 2e-172 603
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 46 3e-172 602
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 45 9e-172 601
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 45 9e-172 601
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 45 1e-171 601
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 46 3e-171 599
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 45 4e-171 599
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 45 2e-170 597
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 45 2e-170 597
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 46 9e-170 594
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 45 1e-169 594
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 47 3e-167 586
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 46 3e-166 582
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 45 9e-166 581
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 47 2e-165 580
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 46 9e-164 574
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 45 1e-163 574
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 45 3e-162 569
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 45 7e-162 568
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 46 4e-161 566
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 43 3e-146 516
WERAM-Pof-0225 ENSPFOP00000018402.1 Poecilia formosa 43 2e-145 513
WERAM-Xim-0163 ENSXMAP00000013381.1 Xiphophorus maculatus 43 2e-145 513
WERAM-Lac-0165 ENSLACP00000019582.1 Latimeria chalumnae 45 2e-144 510
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 41 6e-144 508
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 38 4e-127 452
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 40 7e-124 442
WERAM-Ten-0207 ENSTNIP00000020889.1 Tetraodon nigroviridis 58 1e-110 398
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 52 3e-95 347
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 53 6e-86 316
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 66 5e-82 303
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 49 7e-71 266
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 65 1e-68 259
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 66 6e-64 243
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 43 5e-29 127
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 39 4e-24 110
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 39 8e-24 109
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 42 3e-19 94.7
Created Date 25-Jun-2016