WERAM Information

Tag Content
WERAM ID WERAM-Loa-0122
Ensembl Protein ID ENSLAFP00000011245.2
Gene Name PRDM1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLAFG00000013436.2 ENSLAFT00000013435.2 ENSLAFP00000011245.2
ENSLAFG00000013436.2 ENSLAFT00000035176.1 ENSLAFP00000019226.1
ENSLAFG00000013436.2 ENSLAFT00000029337.1 ENSLAFP00000026840.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 9.70e-42 142.1 115 230
Organism Loxodonta africana
Domain Profile
  HMT RIZ
               RIZ.txt   3 velaessipkeg.lgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNL 90 
                           + l+++++++++ +gv +k++i+kg++fGP++Ge++++++v +nan+k++w+i+ ++ge ++++D+ +eeksnW+ryvn A+s +eqNL
  ENSLAFP00000011245.2 115 NLLFKYATNSNEvIGVVSKEYIPKGTRFGPLIGEIYTNDTVPKNANRKYFWRIY-SRGELHHFIDGFNEEKSNWMRYVNPAHSAREQNL 202
                           56888999888879****************************************.9********************************* PP
               RIZ.txt  91 aalqineqifYktikdIepdeELLvwyk 118
                           aa+q++++++++t+k+I++++ELLvwy+
  ENSLAFP00000011245.2 203 AACQNGMNVYFYTVKPIPANQELLVWYC 230
                           ***************************6 PP
Protein Sequence
(Fasta)		MSETYLRCWI CAWKNVWVRA RQRFHNETLP LQGSLLYTAF AYSTVQAAPK CSSSAVRIQG 60
LAEGTMKMDM EDVDMTLWTE AEFEEKCTYI VNDHSWDSGI DGGTSVQAEA SLPRNLLFKY 120
ATNSNEVIGV VSKEYIPKGT RFGPLIGEIY TNDTVPKNAN RKYFWRIYSR GELHHFIDGF 180
NEEKSNWMRY VNPAHSAREQ NLAACQNGMN VYFYTVKPIP ANQELLVWYC RDFAERLHYP 240
YPGELTMMNL TQTQNNPKQQ STEKSELCPK SVPKREYSVK EILKLDSNPS KGRDLYHSHI 300
SPLTSEKDMD DFRKNGSPEM PFYPRVVYPI RAPLPEDFLK ASLAYGMERP TYITHSPIPS 360
STTPSPSARS SPDQSLKSSS PHSSPGNTLS PLAPGCQEHR DSYTYLNAPY GTEGLGSYPG 420
YTPPSHLPPA FIPSYNTHYP KFLLPPYGMN CNSLSAVSNI NSINNFGLFP RLYPVYGNLL 480
SGGSLPHPML NPASLPSSLP SEGARRLLQP EHPRDVLVPA PHSAFSLTGA AASMKDKACS 540
PTSGSPTAGT AATSEHVVQP KATSAAMAAP SSDEAMNLIK SKRNMTGYKT LPYPLKKQNG 600
KIKYECNVCA KTFGQLSNLK VHLRVHSGER PFKCQTCNKG FTQLAHLQKH YLVHTGEKPH 660
ECQVCHKRFS STSNLKTHLR LHSGEKPYQC KVCPAKFTQF VHLKLHKRLH TRERPHKCAQ 720
CHKSYIHLCS LKVHLKGNCP VVPATGLPLE DLTRINEEIE KFDISDNADR LEDMEDNIDV 780
TSVVEKEILA MVRKEKEDTG LKVSLQRNMG NGLLSSGCTL YESSEPALMK LPHSHPLPLV 840
PVKVKQETVE PMDP 854
Nucleotide Sequence
(Fasta)		ATGAGCGAGA CTTATCTCCG ATGTTGGATT TGTGCTTGGA AAAACGTGTG GGTACGAGCT 60
CGGCAGCGTT TCCACAACGA AACCTTGCCT CTTCAAGGCA GTCTACTTTA TACGGCATTT 120
GCTTACTCAA CTGTCCAAGC TGCCCCAAAG TGTAGCTCCA GCGCTGTAAG GATTCAAGGG 180
TTGGCAGAGG GGACCATGAA AATGGACATG GAGGATGTGG ATATGACTCT GTGGACAGAG 240
GCTGAGTTTG AAGAGAAGTG TACATACATC GTGAACGACC ACTCCTGGGA TTCTGGCATC 300
GACGGAGGGA CTTCAGTTCA GGCAGAGGCA TCCTTGCCAA GGAATCTGCT TTTCAAATAT 360
GCCACCAACA GCAACGAGGT TATTGGAGTG GTGAGTAAAG AATACATACC AAAGGGAACA 420
CGTTTTGGAC CACTAATAGG CGAAATCTAC ACCAATGATA CTGTTCCCAA AAACGCAAAC 480
AGGAAATACT TTTGGCGGAT CTATTCCAGG GGCGAGCTTC ACCACTTCAT CGATGGCTTT 540
AACGAGGAGA AAAGCAACTG GATGCGCTAT GTGAATCCTG CGCACTCTGC CCGGGAGCAA 600
AACCTGGCTG CGTGTCAGAA CGGGATGAAC GTCTACTTCT ACACCGTTAA GCCCATCCCT 660
GCCAACCAGG AACTTCTTGT GTGGTATTGT CGGGACTTTG CAGAAAGGCT TCACTACCCT 720
TATCCCGGAG AGCTGACAAT GATGAATCTC ACACAAACAC AGAACAATCC AAAGCAACAG 780
AGCACTGAGA AAAGTGAACT TTGCCCAAAA AGTGTCCCAA AGAGAGAGTA CAGCGTGAAA 840
GAAATCCTAA AATTGGACTC CAACCCCTCC AAAGGAAGGG ACTTGTACCA TTCCCACATT 900
TCACCCCTCA CTTCAGAAAA GGACATGGAT GACTTCAGGA AAAATGGCAG CCCTGAAATG 960
CCCTTCTATC CTCGAGTTGT TTACCCGATC CGGGCCCCTC TACCAGAAGA CTTTTTGAAA 1020
GCATCCCTAG CCTATGGGAT GGAGAGACCG ACTTACATTA CTCACTCTCC TATTCCATCC 1080
TCCACAACTC CAAGTCCCTC AGCAAGAAGT AGTCCCGACC AAAGCCTAAA AAGCTCCAGT 1140
CCTCACAGCA GCCCAGGGAA TACCTTGTCA CCTCTGGCTC CTGGCTGTCA AGAACATCGG 1200
GACTCATACA CTTACTTGAA TGCACCCTAT GGAACCGAAG GCTTGGGCTC TTATCCGGGA 1260
TACACACCTC CCTCCCACCT CCCACCAGCT TTCATCCCCT CTTACAATAC CCACTACCCG 1320
AAGTTCCTTT TACCCCCATA TGGCATGAAT TGTAACAGCC TGAGTGCTGT GAGTAACATA 1380
AACAGCATCA ACAACTTTGG CCTCTTCCCG AGGTTGTACC CTGTCTATGG TAACCTCCTG 1440
AGTGGGGGCA GCCTGCCTCA CCCCATGCTC AACCCTGCTT CTCTCCCAAG CTCACTGCCC 1500
TCAGAAGGAG CTCGGAGGTT ACTTCAGCCT GAACATCCCA GAGACGTGCT TGTCCCTGCA 1560
CCCCACAGTG CCTTTTCCCT CACCGGGGCT GCCGCCAGCA TGAAGGACAA GGCGTGTAGC 1620
CCCACAAGCG GGTCTCCAAC AGCGGGCACA GCCGCCACGT CAGAGCATGT GGTACAACCC 1680
AAAGCTACCT CAGCAGCAAT GGCAGCCCCC AGCAGTGATG AAGCCATGAA TCTCATTAAG 1740
AGCAAAAGAA ACATGACTGG CTACAAGACA CTTCCCTATC CGCTGAAGAA GCAGAATGGC 1800
AAGATTAAGT ATGAATGCAA CGTCTGCGCC AAGACTTTTG GCCAGCTCTC GAATCTAAAG 1860
GTCCACCTCC GCGTGCACAG TGGAGAACGG CCTTTCAAGT GTCAGACTTG CAACAAGGGC 1920
TTTACTCAGC TTGCCCACCT GCAGAAACAC TACCTGGTAC ACACGGGAGA AAAGCCACAT 1980
GAATGCCAGG TTTGTCACAA ACGATTTAGC AGCACCAGCA ATCTCAAGAC CCACCTGCGC 2040
CTCCACTCAG GAGAGAAACC TTACCAGTGC AAGGTGTGCC CTGCAAAGTT CACCCAGTTT 2100
GTGCACCTGA AACTCCACAA GCGCCTACAC ACCCGGGAGC GGCCCCACAA GTGTGCCCAG 2160
TGCCACAAGA GCTACATCCA CCTCTGCAGC CTCAAGGTCC ACCTGAAGGG AAACTGCCCT 2220
GTGGTCCCAG CCACCGGGCT GCCCTTGGAG GACCTGACCC GCATCAACGA AGAGATTGAG 2280
AAGTTTGACA TCAGTGACAA TGCTGACCGG CTTGAGGACA TGGAGGACAA CATTGATGTG 2340
ACCTCTGTGG TGGAAAAAGA AATTCTGGCC ATGGTCAGAA AAGAGAAGGA AGACACTGGC 2400
CTCAAAGTTT CTTTGCAGAG AAACATGGGG AATGGACTCC TCTCCTCAGG GTGTACCCTT 2460
TATGAATCAT CAGAGCCTGC CCTCATGAAG TTGCCTCACA GTCACCCACT ACCTCTGGTA 2520
CCTGTAAAGG TCAAACAAGA AACAGTTGAA CCAATGGATC CTTAA 2566
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mum-0154 ENSMUSP00000039248.4 Mus musculus 88 0.0 1392
WERAM-Eqc-0053 ENSECAP00000007075.1 Equus caballus 93 0.0 1384
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 92 0.0 1383
WERAM-Mam-0197 ENSMMUP00000028193.1 Macaca mulatta 92 0.0 1383
WERAM-Chs-0178 ENSCSAP00000010863.1 Chlorocebus sabaeus 92 0.0 1383
WERAM-Paa-0115 ENSPANP00000001943.1 Papio anubis 92 0.0 1382
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 92 0.0 1381
WERAM-Gog-0019 ENSGGOP00000001899.2 Gorilla gorilla 92 0.0 1381
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 92 0.0 1380
WERAM-Myl-0154 ENSMLUP00000012812.2 Myotis lucifugus 88 0.0 1380
WERAM-Poa-0152 ENSPPYP00000018898.2 Pongo abelii 91 0.0 1376
WERAM-Hos-0020 ENSP00000358092.4 Homo sapiens 91 0.0 1376
WERAM-Aim-0023 ENSAMEP00000001570.1 Ailuropoda melanoleuca 85 0.0 1361
WERAM-Caj-0071 ENSCJAP00000011710.2 Callithrix jacchus 91 0.0 1360
WERAM-Orc-0152 ENSOCUP00000013310.2 Oryctolagus cuniculus 89 0.0 1325
WERAM-Mup-0102 ENSMPUP00000009446.1 Mustela putorius furo 89 0.0 1325
WERAM-Sus-0027 ENSSSCP00000004716.2 Sus scrofa 90 0.0 1324
WERAM-Ran-0003 ENSRNOP00000040939.3 Rattus norvegicus 86 0.0 1321
WERAM-Fec-0113 ENSFCAP00000009991.3 Felis catus 90 0.0 1314
WERAM-Ptv-0125 ENSPVAP00000011060.1 Pteropus vampyrus 91 0.0 1313
WERAM-Ova-0121 ENSOARP00000012078.1 Ovis aries 88 0.0 1310
WERAM-Otg-0147 ENSOGAP00000012568.2 Otolemur garnettii 90 0.0 1308
WERAM-Soa-0039 ENSSARP00000003687.1 Sorex araneus 88 0.0 1306
WERAM-Bot-0007 ENSBTAP00000001081.5 Bos taurus 88 0.0 1297
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 89 0.0 1295
WERAM-Cap-0151 ENSCPOP00000012667.2 Cavia porcellus 87 0.0 1281
WERAM-Mae-0001 ENSMEUP00000000039.1 Macropus eugenii 85 0.0 1239
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 86 0.0 1232
WERAM-Mod-0168 ENSMODP00000022480.2 Monodelphis domestica 83 0.0 1226
WERAM-Fia-0144 ENSFALP00000012129.1 Ficedula albicollis 78 0.0 1221
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 81 0.0 1218
WERAM-Anp-0116 ENSAPLP00000013409.1 Anas platyrhynchos 82 0.0 1216
WERAM-Sah-0108 ENSSHAP00000011740.1 Sarcophilus harrisii 80 0.0 1215
WERAM-Meg-0134 ENSMGAP00000014296.2 Meleagris gallopavo 81 0.0 1208
WERAM-Gaga-0140 ENSGALP00000024778.3 Gallus gallus 81 0.0 1208
WERAM-Pes-0008 ENSPSIP00000002732.1 Pelodiscus sinensis 82 0.0 1201
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 80 0.0 1194
WERAM-Ora-0042 ENSOANP00000006627.1 Ornithorhynchus anatinus 76 0.0 1190
WERAM-Prc-0096 ENSPCAP00000008555.1 Procavia capensis 81 0.0 1168
WERAM-Chh-0087 ENSCHOP00000009921.1 Choloepus hoffmanni 79 0.0 1138
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 78 0.0 1091
WERAM-Dan-0183 ENSDNOP00000022127.1 Dasypus novemcinctus 76 0.0 1090
WERAM-Xet-0060 ENSXETP00000018988.2 Xenopus tropicalis 71 0.0 993
WERAM-Leo-0172 ENSLOCP00000020417.1 Lepisosteus oculatus 67 0.0 949
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 53 0.0 731
WERAM-Dar-0003 ENSDARP00000004889.5 Danio rerio 55 0.0 730
WERAM-Ect-0142 ENSETEP00000015977.1 Echinops telfairi 91 0.0 708
WERAM-Pof-0225 ENSPFOP00000018402.1 Poecilia formosa 50 0.0 697
WERAM-Orn-0077 ENSONIP00000008446.1 Oreochromis niloticus 50 0.0 686
WERAM-Tar-0004 ENSTRUP00000000947.1 Takifugu rubripes 49 0.0 685
WERAM-Xim-0163 ENSXMAP00000013381.1 Xiphophorus maculatus 49 0.0 682
WERAM-Ocp-0062 ENSOPRP00000005561.1 Ochotona princeps 88 0.0 635
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 91 8e-157 551
WERAM-Dio-0145 ENSDORP00000013387.1 Dipodomys ordii 84 3e-150 530
WERAM-Lac-0165 ENSLACP00000019582.1 Latimeria chalumnae 42 9e-135 478
WERAM-Gaa-0096 ENSGACP00000012338.1 Gasterosteus aculeatus 50 2e-85 314
WERAM-Ten-0146 ENSTNIP00000015268.1 Tetraodon nigroviridis 71 6e-85 313
WERAM-Orla-0101 ENSORLP00000012576.1 Oryzias latipes 65 3e-75 280
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 60 3e-52 204
WERAM-Mim-0047 ENSMICP00000004601.1 Microcebus murinus 41 9e-29 126
WERAM-Tut-0128 ENSTTRP00000010427.1 Tursiops truncatus 38 1e-23 109
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 37 7e-23 107
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 36 2e-19 95.1
Created Date 25-Jun-2016